g.arboreum_cottongen_reftransV1_0003764, g.arboreum_cottongen_reftransV1_0003764 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0003764
Unique Nameg.arboreum_cottongen_reftransV1_0003764
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length328
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr11chromosomeg.arboreum_cottongen_reftransV1_0003764:1..328 .
Chr11:8263914..8264241 +
Homology
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy TrEMBL
Match: A0A067KFY8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10680 PE=4 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.307e-62
Identity = 97/109 (88.99%), Postives = 102/109 (93.58%), Query Frame = 2 
Query:    2 IYNDGFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFVEQCRRLGISLDSDSTYGYHPVNNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            IYND FEGAFCLRSHQNGV+RFNCADSLDRTNAAS+FGALQVFVEQCRRL ISLDSD  YGY  V+NYGGYTAPLPPGWEKR+D VTGKTY+IDHNTRTTTWNHPCPDK
Sbjct:  436 IYNDDFEGAFCLRSHQNGVIRFNCADSLDRTNAASYFGALQVFVEQCRRLAISLDSDMVYGYQSVDNYGGYTAPLPPGWEKRSDAVTGKTYFIDHNTRTTTWNHPCPDK 544
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy TrEMBL
Match: F6HB29_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00850 PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.584e-62
Identity = 94/109 (86.24%), Postives = 98/109 (89.91%), Query Frame = 2 
Query:    2 IYNDGFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFVEQCRRLGISLDSDSTYGYHPVNNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            +YND FEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVF EQCRRLGISLD+D  YGY   +N GGYTAPLP GWEKR+D VTGKTYYIDHNTRTTTW HPCPDK
Sbjct:  455 VYNDDFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFAEQCRRLGISLDTDFVYGYQSYSNQGGYTAPLPQGWEKRSDAVTGKTYYIDHNTRTTTWEHPCPDK 563
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy TrEMBL
Match: V7C8Y5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G059900g PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.831e-62
Identity = 93/110 (84.55%), Postives = 100/110 (90.91%), Query Frame = 2 
Query:    2 IYNDGFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFVEQCRRLGISLDSDSTYGYHPV-NNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            IYND FEGAFCLR+HQNG++RFNCADSLDRTNAASFFG +QVF EQCRRLGISLDSD  +GY  + NNYGGYTAPLPPGWEKR+D VTGKTYYIDHNTRTTTW HPCPDK
Sbjct:  434 IYNDDFEGAFCLRTHQNGIVRFNCADSLDRTNAASFFGCIQVFTEQCRRLGISLDSDLAFGYQSMRNNYGGYTAPLPPGWEKRSDAVTGKTYYIDHNTRTTTWMHPCPDK 543
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy TrEMBL
Match: K7K890_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 2.620e-62
Identity = 93/110 (84.55%), Postives = 100/110 (90.91%), Query Frame = 2 
Query:    2 IYNDGFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFVEQCRRLGISLDSDSTYGYHPV-NNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            IYNDGFEGAFCLR++QNG++RFNCADSLDRTNAASFFG LQVF EQCRRLGISLDSD  +GY  + NNYGGY APLPPGWEKR+D VTGKTYYIDHNTRTTTW HPCPDK
Sbjct:  434 IYNDGFEGAFCLRTNQNGIVRFNCADSLDRTNAASFFGCLQVFTEQCRRLGISLDSDLAFGYQSMNNNYGGYIAPLPPGWEKRSDAVTGKTYYIDHNTRTTTWMHPCPDK 543
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy TrEMBL
Match: A0A0B2RKH1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032535 PE=4 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 2.871e-62
Identity = 93/110 (84.55%), Postives = 100/110 (90.91%), Query Frame = 2 
Query:    2 IYNDGFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFVEQCRRLGISLDSDSTYGYHPV-NNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            IYNDGFEGAFCLR++QNG++RFNCADSLDRTNAASFFG LQVF EQCRRLGISLDSD  +GY  + NNYGGY APLPPGWEKR+D VTGKTYYIDHNTRTTTW HPCPDK
Sbjct:  265 IYNDGFEGAFCLRTNQNGIVRFNCADSLDRTNAASFFGCLQVFTEQCRRLGISLDSDLAFGYQSMNNNYGGYIAPLPPGWEKRSDAVTGKTYYIDHNTRTTTWMHPCPDK 374
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy TrEMBL
Match: K7L2W3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 6.417e-62
Identity = 93/110 (84.55%), Postives = 100/110 (90.91%), Query Frame = 2 
Query:    2 IYNDGFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFVEQCRRLGISLDSDSTYGYHPV-NNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            IYND FEGAFCLR++QNG++RFNCADSLDRTNAASFFG LQVF EQCRRLGISLDSD  +GY  + NNYGGYTAPLPPGWEKR+D VTGKTYYIDHNTRTTTW HPCPDK
Sbjct:  434 IYNDDFEGAFCLRTNQNGIVRFNCADSLDRTNAASFFGCLQVFTEQCRRLGISLDSDLAFGYQSMNNNYGGYTAPLPPGWEKRSDAVTGKTYYIDHNTRTTTWMHPCPDK 543
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy TrEMBL
Match: A0A0B2RCB5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_020313 PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 8.206e-62
Identity = 93/110 (84.55%), Postives = 100/110 (90.91%), Query Frame = 2 
Query:    2 IYNDGFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFVEQCRRLGISLDSDSTYGYHPV-NNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            IYND FEGAFCLR++QNG++RFNCADSLDRTNAASFFG LQVF EQCRRLGISLDSD  +GY  + NNYGGYTAPLPPGWEKR+D VTGKTYYIDHNTRTTTW HPCPDK
Sbjct:  409 IYNDDFEGAFCLRTNQNGIVRFNCADSLDRTNAASFFGCLQVFTEQCRRLGISLDSDLAFGYQSMNNNYGGYTAPLPPGWEKRSDAVTGKTYYIDHNTRTTTWMHPCPDK 518
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy TrEMBL
Match: M5W8C0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000157mg PE=4 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.188e-61
Identity = 92/109 (84.40%), Postives = 99/109 (90.83%), Query Frame = 2 
Query:    2 IYNDGFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFVEQCRRLGISLDSDSTYGYHPVNNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            I ND F+GAFCLRSHQNGV+RFNCADSLDRTNAAS+FG+LQVFVEQCRRLGISLDSD  YGY  + NYGGY APLPPGWEKR+D VTGKT+YIDHNTRTTTW HPCPDK
Sbjct:  427 ICNDDFKGAFCLRSHQNGVIRFNCADSLDRTNAASYFGSLQVFVEQCRRLGISLDSDLAYGYQSMTNYGGYIAPLPPGWEKRSDAVTGKTFYIDHNTRTTTWMHPCPDK 535
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy TrEMBL
Match: A0A061EQN6_THECC (SacI domain-containing protein / WW domain-containing protein isoform 2 OS=Theobroma cacao GN=TCM_019841 PE=4 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 2.157e-61
Identity = 97/109 (88.99%), Postives = 100/109 (91.74%), Query Frame = 2 
Query:    2 IYNDGFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFVEQCRRLGISLDSDSTYGYHPVNNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            IY   FEGAFCLRSHQNGVLRFNCADSLDRTNAAS+FGALQVFVEQCRRLGISLDSD  YGY  +NN GGYTAPLPPGWEKR+D VTGKTYYIDHNTRTTTWNHPCPDK
Sbjct:  435 IYTGDFEGAFCLRSHQNGVLRFNCADSLDRTNAASYFGALQVFVEQCRRLGISLDSDLAYGYQSINNNGGYTAPLPPGWEKRSDAVTGKTYYIDHNTRTTTWNHPCPDK 543
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy TrEMBL
Match: A0A061EI03_THECC (SacI domain-containing protein / WW domain-containing protein isoform 3 OS=Theobroma cacao GN=TCM_019841 PE=4 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 2.397e-61
Identity = 97/109 (88.99%), Postives = 100/109 (91.74%), Query Frame = 2 
Query:    2 IYNDGFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFVEQCRRLGISLDSDSTYGYHPVNNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            IY   FEGAFCLRSHQNGVLRFNCADSLDRTNAAS+FGALQVFVEQCRRLGISLDSD  YGY  +NN GGYTAPLPPGWEKR+D VTGKTYYIDHNTRTTTWNHPCPDK
Sbjct:  435 IYTGDFEGAFCLRSHQNGVLRFNCADSLDRTNAASYFGALQVFVEQCRRLGISLDSDLAYGYQSINNNGGYTAPLPPGWEKRSDAVTGKTYYIDHNTRTTTWNHPCPDK 543
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy Swiss-Prot
Match: SAC9_ARATH (Probable phosphoinositide phosphatase SAC9 OS=Arabidopsis thaliana GN=SAC9 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.044e-61
Identity = 89/106 (83.96%), Postives = 96/106 (90.57%), Query Frame = 2 
Query:   11 DGFEGAFCLRSHQNGVLRFNCADSLDRTNAASFFGALQVFVEQCRRLGISLDSDSTYGYHPVNNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            D  EGAFCLRSHQNGV+RFNCADSLDRTNAASFFG LQVFVEQCRRLGISLD+D  YG++ VNN GGY APLPPGWEKR D VTGK+YYIDHNT+TTTW+HPCPDK
Sbjct:  439 DDIEGAFCLRSHQNGVIRFNCADSLDRTNAASFFGGLQVFVEQCRRLGISLDTDLGYGHNSVNNQGGYNAPLPPGWEKRADAVTGKSYYIDHNTKTTTWSHPCPDK 544
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy Swiss-Prot
Match: RSP5_YEAST (E3 ubiquitin-protein ligase RSP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSP5 PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 5.646e-9
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 2 
Query:  224 LPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPDK 328
            LPPGWE+RTD   G+TYY+DHNTRTTTW  P  D+
Sbjct:  231 LPPGWERRTDNF-GRTYYVDHNTRTTTWKRPTLDQ 264
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy Swiss-Prot
Match: WWP2_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus GN=Wwp2 PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.329e-8
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 2 
Query:  212 YTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPD 325
            +  PLPPGWEKRTD   G+ YY+DHNTRTTTW  P  +
Sbjct:  328 WERPLPPGWEKRTDP-RGRFYYVDHNTRTTTWQRPTAE 364

HSP 2 Score: 50.8322 bits (120), Expect = 6.249e-7
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 2 
Query:  221 PLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHP 316
            PLPPGWEKR D   G+ YY++HNTRTT W  P
Sbjct:  406 PLPPGWEKRQD--NGRVYYVNHNTRTTQWEDP 435
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy Swiss-Prot
Match: PUB3_SCHPO (E3 ubiquitin-protein ligase pub3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pub3 PE=2 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.720e-8
Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 2 
Query:  188 HPVNNYGGYTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPC 319
            H ++++      LPPGWE+R D + G+TYY+DHNTRTTTW  P 
Sbjct:  226 HIMSSFEDQYGRLPPGWERRADSL-GRTYYVDHNTRTTTWTRPA 268
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy Swiss-Prot
Match: WWP2_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2 PE=1 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 1.817e-8
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 2 
Query:  212 YTAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCPD 325
            +  PLPPGWEKRTD   G+ YY+DHNTRTTTW  P  +
Sbjct:  328 WERPLPPGWEKRTDP-RGRFYYVDHNTRTTTWQRPTAE 364

HSP 2 Score: 50.447 bits (119), Expect = 8.122e-7
Identity = 21/33 (63.64%), Postives = 24/33 (72.73%), Query Frame = 2 
Query:  218 APLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHP 316
             PLPPGWEKR D   G+ YY++HNTRTT W  P
Sbjct:  405 GPLPPGWEKRQD--NGRVYYVNHNTRTTQWEDP 435
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy Swiss-Prot
Match: BAG3_MOUSE (BAG family molecular chaperone regulator 3 OS=Mus musculus GN=Bag3 PE=1 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 2.208e-8
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 2 
Query:  221 PLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHP 316
            PLPPGWE + D  TG  +++DHN+RTTTWN P
Sbjct:   23 PLPPGWEIKIDPQTGWPFFVDHNSRTTTWNDP 54
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy Swiss-Prot
Match: BAG3_HUMAN (BAG family molecular chaperone regulator 3 OS=Homo sapiens GN=BAG3 PE=1 SV=3)

HSP 1 Score: 54.6842 bits (130), Expect = 2.856e-8
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 2 
Query:  221 PLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHP 316
            PLPPGWE + D  TG  +++DHN+RTTTWN P
Sbjct:   21 PLPPGWEIKIDPQTGWPFFVDHNSRTTTWNDP 52
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy Swiss-Prot
Match: WWP1_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus GN=Wwp1 PE=1 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 3.294e-8
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 2 
Query:  221 PLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHP 316
            PLPPGWE+R D+  G+ YY+DHNTRTTTW  P
Sbjct:  378 PLPPGWERRVDD-RGRVYYVDHNTRTTTWQRP 408

HSP 2 Score: 51.2174 bits (121), Expect = 4.578e-7
Identity = 23/36 (63.89%), Postives = 26/36 (72.22%), Query Frame = 2 
Query:  215 TAPLPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPCP 322
            T  LP GWE+R D   G+TYY+DHNTRTTTW  P P
Sbjct:  344 TEALPSGWEQRKDP-HGRTYYVDHNTRTTTWERPQP 378
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy Swiss-Prot
Match: PUB1_SCHPO (E3 ubiquitin-protein ligase pub1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pub1 PE=1 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 6.109e-8
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:  224 LPPGWEKRTDEVTGKTYYIDHNTRTTTWNHP 316
            LPPGWE+RTD + G+TYY+DHNTR+TTW  P
Sbjct:  207 LPPGWERRTDNL-GRTYYVDHNTRSTTWIRP 236
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy Swiss-Prot
Match: RSP5_EMENI (E3 ubiquitin-protein ligase RSP5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=hulA PE=1 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 1.044e-7
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 2 
Query:  224 LPPGWEKRTDEVTGKTYYIDHNTRTTTWNHPC 319
            LP GWE+R D + G+TYY+DHNTRTTTWN P 
Sbjct:  233 LPAGWERREDNL-GRTYYVDHNTRTTTWNRPS 263
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067KFY8_JATCU1.307e-6288.99Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
F6HB29_VITVI1.584e-6286.24Putative uncharacterized protein OS=Vitis vinifera... [more]
V7C8Y5_PHAVU1.831e-6284.55Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
K7K890_SOYBN2.620e-6284.55Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2RKH1_GLYSO2.871e-6284.55Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
K7L2W3_SOYBN6.417e-6284.55Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2RCB5_GLYSO8.206e-6284.55Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
M5W8C0_PRUPE1.188e-6184.40Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
A0A061EQN6_THECC2.157e-6188.99SacI domain-containing protein / WW domain-contain... [more]
A0A061EI03_THECC2.397e-6188.99SacI domain-containing protein / WW domain-contain... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0003764 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
SAC9_ARATH2.044e-6183.96Probable phosphoinositide phosphatase SAC9 OS=Arab... [more]
RSP5_YEAST5.646e-968.57E3 ubiquitin-protein ligase RSP5 OS=Saccharomyces ... [more]
WWP2_MOUSE1.329e-863.16NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus... [more]
PUB3_SCHPO1.720e-852.27E3 ubiquitin-protein ligase pub3 OS=Schizosaccharo... [more]
WWP2_HUMAN1.817e-863.16NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Hom... [more]
BAG3_MOUSE2.208e-862.50BAG family molecular chaperone regulator 3 OS=Mus ... [more]
BAG3_HUMAN2.856e-862.50BAG family molecular chaperone regulator 3 OS=Homo... [more]
WWP1_MOUSE3.294e-868.75NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus... [more]
PUB1_SCHPO6.109e-870.97E3 ubiquitin-protein ligase pub1 OS=Schizosaccharo... [more]
RSP5_EMENI1.044e-768.75E3 ubiquitin-protein ligase RSP5 OS=Emericella nid... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 55..88
e-value: 2.6E-11
score: 53.6
IPR001202WW domainPFAMPF00397WWcoord: 56..86
e-value: 3.8E-14
score: 52.2
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 60..86
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 54..88
score: 16.451
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 47..87
NoneNo IPR availableGENE3D2.20.70.10coord: 54..88
e-value: 7.3E-19
score: 66.5
NoneNo IPR availablePANTHERPTHR14791BOMB/KIRA PROTEINScoord: 47..90
IPR002013SAC domainPROSITEPS50275SACcoord: 1..68
score: 10.301

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0003764 ID=g.arboreum_cottongen_reftransV1_0003764; Name=g.arboreum_cottongen_reftransV1_0003764; organism=Gossypium arboreum; type=contig; length=328bp
CATCTACAATGATGGCTTTGAAGGGGCCTTCTGCTTAAGATCCCATCAAA
ATGGTGTGTTGCGTTTCAATTGTGCAGATTCTTTGGACAGAACCAATGCT
GCTAGTTTCTTTGGGGCACTGCAAGTATTTGTTGAGCAGTGTAGGCGGCT
TGGGATATCTCTTGATAGTGATTCGACATATGGTTACCATCCAGTCAATA
ACTATGGTGGGTATACTGCCCCCCTCCCACCTGGTTGGGAAAAACGAACT
GATGAAGTAACAGGGAAAACTTATTATATTGATCACAATACAAGGACCAC
AACATGGAATCATCCATGCCCAGATAAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR002013SAC_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0042578phosphoric ester hydrolase activity