g.arboreum_cottongen_reftransV1_0007741, g.arboreum_cottongen_reftransV1_0007741 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0007741
Unique Nameg.arboreum_cottongen_reftransV1_0007741
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length962
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr5chromosomeg.arboreum_cottongen_reftransV1_0007741:1..962 .
Chr5:15048194..15049155 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy TrEMBL
Match: F6HW89_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0166g00190 PE=4 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 2.871e-63
Identity = 143/297 (48.15%), Postives = 203/297 (68.35%), Query Frame = 3
Query:   12 SLSKVAEFVSCCEENRKFVARFDGFVEVIAGVLKRKCVEIKALETAVRILDLILSENGVTEGLNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXXXXXXXXXXXXXXXKTNNNESLNDAXXXXXXXXXXXXXXXXXXXENGIVEILSNSL---------TEKSLKLLATLSTCSEGRSAISSEPKCAAAIVEKL-LKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQREGEGNVKMMCRNLVKALRAVCKDWCLGSYETKTTHIRP 872
            +L K+ ++ S  +ENR+FVA  DGFV V+AGVL      I+ LE  VRILDL++ E GV E +  LILKSN++   LSAI+LIL+ GS +SKI S R+L+++A+D ESKR IS+ + L+S+LLQLL +  + S  D+V S L  I++TR  +++L+ +G+V+ L+ +L         TEKS+KLL T+S C +G  AI  +P C AA+V+++ +KLS +  EDA+TVLWS C LN++ + +EAV K  G+TKIL++MQ     NV+ MC +LVK  R   K  CL SY+TKTTHI P
Sbjct:  106 ALPKILDYASSSDENRRFVASLDGFVPVVAGVLGNAGAGIEILELVVRILDLVMVEKGVKEQIQGLILKSNRD--HLSAILLILEKGSSDSKIASARILEAIAIDPESKRSISEREGLLSVLLQLLSSQTDSSSLDSVLSCLIAITVTRQTKTQLVRSGLVQTLAKTLSTSNYPISTTEKSIKLLLTISNCRDGHQAICEDPICVAAVVQRMSMKLSSSAVEDAVTVLWSVCYLNRDSKAQEAVAKSTGLTKILLLMQTNCSANVRRMCCDLVKIFRVNSKS-CLASYDTKTTHITP 399          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy TrEMBL
Match: A0A059BSF7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02720 PE=4 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.356e-61
Identity = 136/305 (44.59%), Postives = 206/305 (67.54%), Query Frame = 3
Query:    3 CVDSLSKVAEFVSCCEENRKFVARFDGFVEVIAGVLKRKC-----VEIKALETAVRILDLILSENGVTEGLNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXXXXXXXXXXXXXXXKTNNNESLNDAXXXXXXXXXXXXXXXXXXXENGIVEILSNSLT---------EKSLKLLATLSTCSEGRSAISSEPKCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQREGEGNVKMMCRNLVKALRAVCK--DWCLGSYETKTTHIR 869
            C  +L K AEF S  EENR+F+A  DGFV  +  VL R        EI+ LE AVR+L+ IL+ENGV E LNKL+L+S++    LS +V +L+ G L SKI +VR+LDS+A+D+ESKR I++++ +++  ++LL  + +ESL D V  +L  +++ RS+++RL++ G+V ILS  ++         E++L+L   +ST +EGR A+S +   A ++V +L+K S+  TEDA+ VLWS CC+  + RVKE V +  G+TK+L++MQ E +  VK MC +L+KALR+ C+  D  + SYET+TTHIR
Sbjct:  119 CCGALKKAAEFASYREENRRFLAGSDGFVAAVVRVLTRGGEGSSESEIEVLELAVRVLESILTENGVKERLNKLLLRSDR-GNCLSPMVSLLRSGRLASKIGAVRILDSIAVDNESKRSIAETEGVLAESIRLLVADTDESLRDVVLPLLIKLAVARSMKARLVQLGLVPILSGFISDQDSTGPTVERALRLTQMVSTVAEGRQAVSEDASLAGSLVGRLMKASRAATEDAVAVLWSVCCVCGDARVKERVARSGGMTKVLLVMQSEEDAGVKKMCSDLMKALRSGCETVDSGMVSYETRTTHIR 422          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy TrEMBL
Match: B9SJF8_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_0136890 PE=4 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 3.623e-58
Identity = 137/303 (45.21%), Postives = 199/303 (65.68%), Query Frame = 3
Query:    9 DSLSKVAEFVSCCEENRKFVARFDGFVEVIAGVLKRKC--VEIKALETAVRILDLILSENGVTEGLNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXXXXXXXXXXXXXXXKTNNNESLNDAXXXXXXXXXXXXXXXXXXXENGIVE----ILSN-----SLTEKSLKLLATLSTCSEGRSAISSEPKCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQREGEGN-VKMMCRNLVKALRAVCKD--WCLGSYETKTTHIRPC 875
            +SL K+ EF+ C +  ++F+A  D F+  +   L +    V+I  +E  +R+LDLIL +NGV E L++L L  N  S FL    L++++G+L SKI+S+RVL+S++L +    +      L  +     +T NN S+NDAV S L ++++TRSV+++L +  +VE    ILSN     S+ EKS+KLL+ ++TC++GR AIS +P CA  IVE+L+K+SKT TED + VLWS CCL K+ERVKE VVK  G+TK+L++MQ EG+GN  + MC  LVK LR   KD    +  Y+TKTTHI PC
Sbjct:  109 ESLVKIVEFLRCSDAKKRFLADCDLFIGSLVYTLAKDTGGVDIVVIELIIRVLDLILLQNGVKEKLHRL-LNHNCLSPFL----LVIKNGNLTSKIESIRVLESISLSNYHHTQTLIPILLDLL-----ETQNN-SVNDAVLSFLISVTVTRSVKTQLAQLKLVETISKILSNQNATVSVIEKSMKLLSIVATCADGRLAISEDPMCAGCIVERLMKVSKTATEDGVMVLWSLCCLFKDERVKEKVVKSKGLTKVLLVMQSEGDGNSARKMCVELVKVLRVAVKDNGGVVMCYDTKTTHIMPC 400          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy TrEMBL
Match: W9SPG5_9ROSA (U-box domain-containing protein 29 OS=Morus notabilis GN=L484_017896 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.694e-57
Identity = 136/306 (44.44%), Postives = 201/306 (65.69%), Query Frame = 3
Query:    6 VDSLSKVAEFVSCCEENRKFVARFDGFVEVIAGVLKRKCVEIKALETAVRILDLILSENGVTEGLNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXX--XXXXXXXXXXXXXKTNNNESLNDAXXXXXXXXXXXXXXXXXXXENGIVEILSNSLT---------EKSLKLLATLSTCSEGRSAISSEPKCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQR---EGEGNVKMMCRNLVKALRAVCKD--WCLGSYETKTTHIRPC 875
            + +LS +A+F    +ENR+ +A FDGFV  I GVL R   +++ LE  +RILD IL ++   E  + LI K  Q   FL++I L+L++ SL +KI+S RVL S+A D +SKR IS      L  + L   +++ +++L+DAV S L  IS TRS +++L+  GIV +L+ +L+         E ++KLL+ +STC+EGRSAIS + +CAAA VE+L+K+S   TEDA+ VLWS CCL  E++ KE+VV+ NGV +IL++MQ    EG   V+ MC +L++ L+  C    + LGSY++KTTHI PC
Sbjct:  118 IGNLSSIADFAGFSDENRRSLADFDGFVSAIVGVLSRGGAKMEILELVIRILDSILLDDRGREQAHVLISKRIQ--AFLTSIRLVLRNASLKAKIESARVLRSIANDEQSKRAISDNRDLVLELLNLLTSESDYDQALHDAVYSCLIAISATRSKKAQLVGLGIVNLLARTLSDRNTNKSVAENAMKLLSIVSTCAEGRSAISEDRRCAAAAVERLMKVSTVATEDAVAVLWSVCCLLGEKKTKESVVRSNGVARILLVMQSGYCEGH-PVRRMCGDLLRVLKIGCSSDGFGLGSYQSKTTHILPC 420          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy TrEMBL
Match: F6I0G9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g00870 PE=4 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.634e-51
Identity = 123/299 (41.14%), Postives = 190/299 (63.55%), Query Frame = 3
Query:    3 CVDSLSKVAEFVSCCEENRKFVARFDGFVEVIAGVLKRKCVEIKALETAVRILDLILSENGVTEGLNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXXXXXXXXXXXXXXXKTNNNESLNDAXXXXXXXXXXXXXXXXXXXENGIVEIL---------SNSLTEKSLKLLATLSTCSEGRSAISSEPKCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQREGEGNVKMMCRNLVKALRAVCKDWCLGSYETKTTHIRP 872
            C++ +SK+  F    EE+RKF+AR DGFV ++   L        ALE  VR+LD+I+SE+   + L   +LKS+++   LS+I+L+LQ GS  S+I S RVL+S+A+D+ESK  I++   L S L++++ T  + ++ ++  S L  +S+ R +R +++  G+V+ L         S S+TEK+LKLL   S+C EG+S I     C +AIV+K+LK+S T TE A+T+LWS C L++++R +  V + NG+TKILV+MQ      V+ +  +L+K  R   K  CL SY+TKTTHI P
Sbjct:  116 CLECMSKIICFARESEESRKFLARIDGFVSLLVDFLGSGNANFLALEQVVRVLDMIISEHEDHKQLANSMLKSDRDC--LSSILLVLQQGSAESRIASARVLESIAIDAESKLLIAEKDGLFSELIRIMSTETDPTMIESTLSCLIAVSMPRRIRPKIVRLGVVKQLTKLLSDPNWSVSVTEKALKLLEMASSCKEGKSEICENSDCVSAIVQKMLKVSSTATEHAVTILWSVCYLSRDDRAQSTVTQNNGLTKILVLMQSNCSPAVRQLAGDLLKIFRVSSKS-CLSSYDTKTTHIMP 411          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy TrEMBL
Match: Q9AR60_SOLTU (Photoperiod responsive protein OS=Solanum tuberosum subsp. andigenum GN=phor1 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 4.238e-51
Identity = 134/304 (44.08%), Postives = 189/304 (62.17%), Query Frame = 3
Query:    6 VDSLSKVAEFVSCCEENRKFVARFDGFVEVIAGVLKRKCVEIKALETAVRILDLILSENGVTEGLNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXXXXXXXXXXXXXXXKTNNNESLNDAXXXXXXXXXXXXXXXXXXXENGIVE----ILSNSLT-----EKSLKLLATLSTCSEGRSAISSEPKCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQREGEGNVKMMCRNLVKALRAV---CKDW---CLGSYETKTTHIRP 872
            + SL+K+ EFV C  ENR+F       +  + GVL   C   +  E  V +LDL++SENGV E LNK ILKS++  KFL   +LIL+ G L+S+I++ R+L+ +ALD++S+R++ + Q L+  L     T  N    +A  S L  +S TR  +  L+  GIV+    ILS S T     EKSLKLL T++TC+EGR+AI    +C +AIV +L+K SK  TE  +TVLWS CCL ++   ++ V K NG+TK+L++MQ +    V+ MC  LVKALR V    K++   CL SY+TKTTHI P
Sbjct:  117 LSSLAKIVEFVKCSGENRRFFVNSSDAIVSVVGVLV-DCDVGEVCEAVVAVLDLVVSENGVKEQLNKEILKSDR--KFLPKFLLILRKGKLSSRIQTARILEFIALDADSQRKMIEEQGLLYELHVFTSTETNRFAIEAGLSTLIAVSTTRPAKKELVRFGIVQTIGKILSGSETARAVVEKSLKLLETVATCTEGRAAIVKGEECMSAIVTRLMKSSKAATEHGVTVLWSVCCLFRDTAARDVVGKANGLTKVLLVMQSDCSAAVRQMCGELVKALRVVNNKHKNYSKSCLASYDTKTTHIMP 417          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy TrEMBL
Match: V7C442_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G098600g PE=4 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 6.419e-51
Identity = 127/300 (42.33%), Postives = 189/300 (63.00%), Query Frame = 3
Query:   12 SLSKVAEFVSCCEENRKFVARFDGFVEVIAGVLKRKCVEIKALETAVRILDLILSENGVTEGLNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXXXXXXXXXXXXXXXKTNNNESLNDAXXXXXXXXXXXXXXXXXXXENGIVEILSNSL--------TEKSLKLLATLSTCSEGRSAISSEPKCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQREGEGNVKMMCRNLVKALRAVCKD----WCLGSYETKTTHIRPC 875
            +LSK+AEF +   ENR+ +A F GF   I   L      I   E A+ +LD +L +NG  E + +LIL + Q+     +++ +L++GS  SKI++VRVL+ LA D +S + I ++Q L+S L   LK +  E L DAV   L  +S+TRS +  L+  G+VE++S  L         E+ L++LA ++TC+EGR+A+ +EP CAAA+VE++ K +K   EDA+ VLWS CCL+   +V++ V K NGV  IL+ MQR  E +V+ MC +L+K L+  CK+      LGSY+TKTTHI+PC
Sbjct:  111 TLSKIAEFATSSAENRRKLASFPGFDAAIVRALAGCSSRIDVSENAIYLLDSVLRQNGNPEKIRRLILDARQQC--FDSMLFVLRNGSAKSKIETVRVLEFLARDFQSSKSIVETQGLLSSLAGFLK-DGGEELRDAVLLFLGVVSVTRSAKVELVNCGVVELVSKLLQECSSAKTAERCLRVLAVVATCAEGRAAMVAEPSCAAAVVERVTKAAKAAAEDAVMVLWSLCCLSGNVKVRDDVAKRNGVAVILLAMQRGWEEHVRSMCVDLIKVLKGACKNNGLGLELGSYDTKTTHIKPC 407          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy TrEMBL
Match: M0ZJK6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000791 PE=4 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.085e-50
Identity = 134/304 (44.08%), Postives = 188/304 (61.84%), Query Frame = 3
Query:    6 VDSLSKVAEFVSCCEENRKFVARFDGFVEVIAGVLKRKCVEIKALETAVRILDLILSENGVTEGLNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXXXXXXXXXXXXXXXKTNNNESLNDAXXXXXXXXXXXXXXXXXXXENGIVE----ILSNSLT-----EKSLKLLATLSTCSEGRSAISSEPKCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQREGEGNVKMMCRNLVKALRAVC---KDW---CLGSYETKTTHIRP 872
            + SL+K+ EFV C  ENR+F       +  + GVL   C  ++  E  V +LDL++SEN V E LNK ILKS++  KFL   +LIL+ G L+S+I++ R+L+ +ALD++S+R++ + Q L+  L     T  N    +A  S L  +S TR  +  L+  GIV+    ILS S T     EKSLKLL T++TC+EGRSAI    +C + IV +L+K SK  TE  +TVLWS CCL ++   +E V K NG+TK+L++MQ +    V+ MC  LVKALR V    K++   CL SY+TKTTHI P
Sbjct:  117 LSSLAKIVEFVKCSGENRRFFVNLSDAIVSVVGVLV-DCDVVEVCEAVVAVLDLVVSENEVKEQLNKEILKSDR--KFLPKFLLILRKGKLSSRIQTARILEFIALDADSQRKMVEEQGLLYELHVFTSTETNRFAIEAGLSTLIAVSTTRPAKKELVRFGIVQTIGKILSGSETARAVVEKSLKLLETVATCTEGRSAIGKGEECLSVIVTRLMKSSKAATEHGVTVLWSVCCLFRDTEAREVVGKANGLTKVLLVMQSDCSAGVRQMCGELVKALRVVNNKDKNYSKSCLASYDTKTTHIMP 417          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy TrEMBL
Match: K4BT95_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc04g071030.1 PE=4 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 3.515e-50
Identity = 133/313 (42.49%), Postives = 188/313 (60.06%), Query Frame = 3
Query:    6 VDSLSKVAEFVSCCEENRKFVARFDGFVEVIAGVLKRKCVEIKALETAVRILDLILSENGVTEGLNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXXXXXXXXXXXXXXXKTNNNESLNDAXXXXXXXXXXXXXXXXXXXENGIVE----ILSNSLT-----EKSLKLLATLSTCSEGRSAISSEPKCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQREGEGNVKMMCRNLVKALRAV------------CKDW---CLGSYETKTTHIRP 872
            + SL+K+ EFV C  ENR F       +  I GVL   C  ++  E  V +LDL++SENGV E LNK ILKS+Q  KFL   +L+L+ G L+S+I++ R+L+ +ALD++S+R++ + Q L+  L     T  N    +   S L  +S TR  +  L+  GI++    ILS+S T     EKSLKLL T++TC+EGR+AI    +C +AIV +L+K SK  TE  +TVLWS CCL +    +E V K NG+TK+L++MQ +    V+ MC  LVKALR V             K++   CL SY+T+TTHI P
Sbjct:  117 LSSLAKIGEFVKCSGENRSFFVNLSDAIANIVGVLV-DCDVVEVCEAVVAVLDLVVSENGVKEQLNKEILKSDQ--KFLPKFLLVLRKGKLSSRIQTARILEFIALDADSQRKMVEEQGLLYELHVFTSTETNRFAIEVGLSTLIAVSTTRLAKKELVRFGIIQTIGKILSDSETARAVVEKSLKLLETVATCAEGRTAIGKGEECLSAIVTRLMKSSKAATEHGVTVLWSVCCLFRHTAAREVVGKANGLTKVLLVMQSDCSAAVRQMCGELVKALRVVNTFSVRTEEVIKIKNYSKSCLASYDTQTTHIMP 426          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy TrEMBL
Match: I1MPA0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.030e-46
Identity = 124/299 (41.47%), Postives = 190/299 (63.55%), Query Frame = 3
Query:   15 LSKVAEFVSCCEENRKFVARFDGFVEVIAGVLKRKCVEIKALETAVRILDLILSENGVTEG--LNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXXXXXXXXXXXXXXXKTNNNESLNDAXXXXXXXXXXXXXXXXXXXENGIVEILSNSL-------TEKSLKLLATLSTCSEGRSAISSEPKCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQREGEGNVKMMCRNLVKALRAVCKDWC---LGSYETKTTHIRPC 875
            LSK+AEF     ENR+ +A F GF   +   L      I   E A+ +L  +  ENG + G  + KLIL + ++     A++ +L++GSL SKI++V+VL+ LA D +S + IS++  L+S+L   LK +  E +NDAV S+L  +S+T S +  L+ +G+VE+++  L        E+ L++LA L+TC+EGR+A++ EP CAAA+VE++ K SK    DA+ VLWS CCL +  +V++ V K NGV  +L++MQR  E +V+ MC +L+K L+  CK+     LG Y+TKTTHI+PC
Sbjct:  119 LSKIAEFAKKSGENRRSLAAFPGFDSAVVRALAGSNSLIDVAENAIYLLGSVFRENGKSTGERIRKLILDAREQC--FDAMIFVLRNGSLKSKIETVKVLEFLACDFQSSKSISEACGLLSLLASFLK-DGGEEINDAVLSLLGVVSVTHSAKVELVSSGVVEVVTKLLRACSAATAERCLRMLAVLATCAEGRAAMAEEPSCAAAVVERITKASKAAAADAVAVLWSLCCLCRNVKVRDEVAKRNGVVVVLLVMQRGWEEHVRSMCVDLIKVLKGACKNGLGLELGCYDTKTTHIKPC 414          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy Swiss-Prot
Match: PUB29_ARATH (U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.638e-35
Identity = 110/304 (36.18%), Postives = 180/304 (59.21%), Query Frame = 3
Query:    6 VDSLSKVAEFVSCCEENRKFVARFDGFVEVIAGVLKRKCVEIKALETAVRILDLILSENGVTEGLNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXXXX--XXXXXXXXXXXKTNNNESLNDAXXXXXXXXXX---------XXXXXXXXXENGIVEILSN-SLTEKSLKLLATLSTCSEGRSAISSEP--KCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEER-VKEAVVKGNGVTKILVIMQREGEGNVKMMCRNLVKALRAVCKDWCLGSYETKTTHIRP 872
            +++L K+  FV   + NR+F+++   FV ++  +++ K  +I+ +  A+RILD I  +    E L+ L+L +N     L+AI+L +Q G+L SKI+SVRVLD ++ D++SK  I++        +    +  +++ SL +A  S L TIS               +++ +  + E L+N ++TEKSLKLL TLS+  EGR  I  +   +C   +V+KLLK+S T TE A+T+LW  C + +E++ V+E V + NGVTK+LV++Q      V+ M ++L+K L+       L +YETKTTHI P
Sbjct:  117 LENLMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDR---ERLSNLML-ANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLK--FNSSALAAYETKTTHIMP 414          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy Swiss-Prot
Match: PUB28_ARATH (U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 7.656e-29
Identity = 107/301 (35.55%), Postives = 177/301 (58.80%), Query Frame = 3
Query:    9 DSLSKVAEFVSCCEENRKFVARFDGFVEVIAGVL--KRKCVEIKALET--AVRILDLILSENGVTEGLNKLILKSNQESKFLSAIVLILQHGSLNSKIKSVRVLDSLALDSESKRRXXXXXXXXXXXXXXXKTNNNESLNDAXXXXXXXXXXXXXXXXXXXENGIVEILSN---------SLTEKSLKLLATLSTCSEGRSAISSEPKCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQREGEGNVKMMCRNLVKALRAVCKDWCLGSYETKTTHIRP 872
            D+ SK+  F    +ENR+F+A  D FV ++  ++   R   + + L    AV+IL +I  +      L+ LIL +  +   L++  L+++ G+   KI    VL+ +A+D+ESK  I+  + L++ +++L+ ++++ SL +A  S+L  I+ ++ V+  LI   +V  L++         S+TEK LKLL  +S+C EGRS I  +  C   +V KL+K+S   TE A+TVLWS C L KE++ ++AV++ NGVTKIL+++Q      V+ M  +L+K  +   +  CL  YETKTTHI P
Sbjct:  112 DARSKILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRRRLSNLILTNGGDC--LTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEKCLKLLEAISSCKEGRSEI-CDGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNSRS-CLSVYETKTTHIMP 408          
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy Swiss-Prot
Match: PUB27_ARATH (U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.582e-21
Identity = 54/119 (45.38%), Postives = 75/119 (63.03%), Query Frame = 3
Query:  519 EKSLKLLATLSTCSEGRSAI-SSEPKCAAAIVEKLLKLSKTGTEDALTVLWSTCCLNKEERVKEAVVKGNGVTKILVIMQREGEGNVKMMCRNLVKALRAVCKDWCLGSYETKTTHIRP 872
            EK LKLL  L++  EGRS I   + +C   +V+KL+K+S   TE A+TVLWS   L KE++  EAV   NGVTKIL+++Q      V+ M  +L+K  +   +  CL +Y+TKTTHI P
Sbjct:  302 EKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSYLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVNSRS-CLSAYDTKTTHIMP 419          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
F6HW89_VITVI2.871e-6348.15Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A059BSF7_EUCGR4.356e-6144.59Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
B9SJF8_RICCO3.623e-5845.21Ubiquitin-protein ligase, putative OS=Ricinus comm... [more]
W9SPG5_9ROSA3.694e-5744.44U-box domain-containing protein 29 OS=Morus notabi... [more]
F6I0G9_VITVI1.634e-5141.14Putative uncharacterized protein OS=Vitis vinifera... [more]
Q9AR60_SOLTU4.238e-5144.08Photoperiod responsive protein OS=Solanum tuberosu... [more]
V7C442_PHAVU6.419e-5142.33Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
M0ZJK6_SOLTU1.085e-5044.08Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
K4BT95_SOLLC3.515e-5042.49Uncharacterized protein OS=Solanum lycopersicum GN... [more]
I1MPA0_SOYBN2.030e-4641.47Uncharacterized protein OS=Glycine max PE=4 SV=1[more]

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BLAST of g.arboreum_cottongen_reftransV1_0007741 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PUB29_ARATH1.638e-3536.18U-box domain-containing protein 29 OS=Arabidopsis ... [more]
PUB28_ARATH7.656e-2935.55U-box domain-containing protein 28 OS=Arabidopsis ... [more]
PUB27_ARATH8.582e-2145.38U-box domain-containing protein 27 OS=Arabidopsis ... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 9..269
e-value: 3.9E-16
score: 57.9
NoneNo IPR availablePANTHERPTHR22849:SF12SUBFAMILY NOT NAMEDcoord: 1..287
NoneNo IPR availablePANTHERPTHR22849WDSAM1 PROTEINcoord: 1..287
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 71..267

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0007741 ID=g.arboreum_cottongen_reftransV1_0007741; Name=g.arboreum_cottongen_reftransV1_0007741; organism=Gossypium arboreum; type=contig; length=962bp
GCTGCGTCGATTCTTTGTCTAAGGTTGCCGAGTTCGTAAGCTGTTGCGAA
GAGAACCGGAAATTTGTAGCTAGATTCGACGGTTTCGTTGAGGTAATCGC
CGGAGTTTTGAAAAGGAAATGTGTGGAAATCAAAGCTTTGGAAACGGCGG
TTAGGATTTTGGATTTGATTTTGAGCGAAAATGGAGTCACAGAAGGGTTA
AACAAATTAATCCTTAAAAGCAATCAGGAAAGTAAATTTTTATCTGCAAT
CGTTTTAATTCTTCAACACGGAAGCCTGAACTCGAAGATCAAGTCAGTCC
GAGTTCTGGACTCACTAGCACTTGACTCGGAATCCAAACGCAGGATCTCC
GACTCACAAGACCTTATATCCATCCTTCTCCAGCTCCTGAAAACAAACAA
CAACGAATCCTTAAACGACGCCGTTACTTCCATTTTAACCACCATTTCAA
TAACGCGCTCCGTCAGATCCCGCCTCATCGAAAACGGCATCGTTGAAATC
CTATCAAACTCGCTCACAGAAAAGTCGTTGAAGTTGTTAGCAACGCTTAG
CACTTGCAGCGAAGGGAGGTCAGCAATCAGTTCCGAGCCAAAATGCGCGG
CGGCGATCGTAGAAAAGCTGTTGAAGTTGTCTAAAACGGGGACGGAGGAC
GCCCTAACGGTGTTGTGGAGCACGTGTTGCTTGAACAAAGAGGAGAGAGT
GAAAGAAGCGGTGGTAAAAGGGAATGGGGTGACGAAGATATTAGTAATAA
TGCAAAGAGAAGGGGAAGGGAACGTGAAGATGATGTGCAGGAATTTGGTT
AAGGCTCTAAGAGCTGTATGTAAAGATTGGTGTTTAGGCAGTTATGAAAC
CAAGACTACACATATTAGACCTTGTTGAGGAGCATTCTTTGTTTTTGGAC
ATAAATTTACGCACAAGATTCATGTAATTACCACTTAGTTCAAAGGAAAC
ACGATTCTATGT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding