g.arboreum_cottongen_reftransV1_0011163, g.arboreum_cottongen_reftransV1_0011163 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0011163
Unique Nameg.arboreum_cottongen_reftransV1_0011163
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1146
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr9chromosomeg.arboreum_cottongen_reftransV1_0011163:1..1146 .
Chr9:69996171..69997841 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy TrEMBL
Match: C5YAU3_SORBI (Putative uncharacterized protein Sb06g020406 (Fragment) OS=Sorghum bicolor GN=Sb06g020406 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.354e-13
Identity = 53/185 (28.65%), Postives = 89/185 (48.11%), Query Frame = -3
Query:  461 AQKILLIPLAQHTHEHFLSWRGEASREYFVRSGYKILLQ---RNENYRQKEINTC--------YKKLWSCDLPSKINITAWRVTLNFILTLVNLKAKRLINEAICQRCLQGLETREHVFRDCTATKKIWENLEFTRPQTLSQVEFME---WFTWIMLHSTREVSQTFICALWAIWSAKNKWMYEN 973
            ++ IL +PL+    +   +W  E +  + VRS Y++L++     E+Y +   N          +KKLWS  LPSKI +  WR+ LN I T   LK++ L + + C+ C    +T EH    CT +K +W  L+      +S +       W T++  +  +      +   WAIW A+ K ++E 
Sbjct:   13 SEAILQMPLSMRKQKDCWAWHHEKNGLFTVRSAYRMLIELKKSREDYFEGRANCSDFATSQKEWKKLWSMKLPSKIKVFCWRLALNSIPTASVLKSRNLASTSHCKICGAVDDTWEHSLLFCTMSKCVWALLDEDITNLISHLRISNPKHWITFMCCNIPQADGIRVLVTCWAIWQARRKAIHEG 197          

HSP 2 Score: 27.7202 bits (60), Expect = 1.354e-13
Identity = 14/55 (25.45%), Postives = 25/55 (45.45%), Query Frame = -2
Query:  327 QETLRLESELWRPPKKDFFKINFDAAFDN-----------RQNRSLLLGPTEMVL 458
            Q   + ++ LW+ P +   KIN DAA +            R +R   + P+ M++
Sbjct:  229 QNQSKQKTRLWKAPDQGKCKINVDAAVNRVGSKGAVGVVCRNDRGEFIAPSAMII 283          
BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy TrEMBL
Match: I6M4U0_MAIZE (Putative ZmL1 non-LTR retrotransposon protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.824e-13
Identity = 51/185 (27.57%), Postives = 89/185 (48.11%), Query Frame = -3
Query:  476 RVGFSEEVAQKILLIPLAQHTHEHFLSWRGEASREYFVRSGYKILLQRNENYRQKEINT--------CYKKLWSCDLPSKINITAWRVTLNFILTLVNLKAKRLINEAICQRCLQGLETREHVFRDCTATKKIWE--NLEFTRPQTLSQVEFMEWFTWIMLHSTREVSQT-FICALWAIWSAKNK 997
            R  F +E A  IL IP+ Q   E  L+W G+    + V+S Y +  +R +++   + ++         +K +W+ ++ +KI +  WR+  N     VN+  + +  E +C  C +  E   H+F  C   K++W    LE TR    S+   +E    I+  + RE ++   +  LW  WSA+NK
Sbjct:   84 RDTFLQEDADCILAIPI-QEGMEDTLAWHGDPKGNFSVKSAYALASRRRDHHNNADASSSISGRGENVWKSIWNVNVTNKIKMFLWRLAHNSHPVRVNIARRGIKIETLCPMCFRLDEDGGHLFLKCKKVKQVWRCLCLEDTRTLLASKASALEVIESIL--TLREETKIKVVLLLWCWWSARNK 265          

HSP 2 Score: 34.2686 bits (77), Expect = 1.824e-13
Identity = 18/52 (34.62%), Postives = 26/52 (50.00%), Query Frame = -2
Query:  990 FLSSELGSLPSYTWKGIWASKGLLIARLQWKVGNRQSIKIEEDFWVPNVESR 1145
            FL  E     SYTW+ +     LL   L W++G+   + I  D W+P  E+R
Sbjct:    2 FLKQEQKKGISYTWRNVLKGLHLLKEGLIWRIGDGNQVNIWVDPWIPRGETR 53          
BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy TrEMBL
Match: A0A0A8XVJ3_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.965e-13
Identity = 52/184 (28.26%), Postives = 81/184 (44.02%), Query Frame = -3
Query:  479 FSEEVAQKILLIPLAQHTHEHFLSWRGEASREYFVRSGYKIL-----------LQRNENYRQKEINTCYKKLWSCDLPSKINITAWRVTLNFILTLVNLKAKRLINEAICQRCLQGLETREHVFRDCTATKKIWENLEFTRPQTLSQVEFMEWFTWI---MLHSTREVSQTFICALWAIWSAKN 988
            F+E  A++IL IPL+Q+    F+SW    +  Y V+S Y +              R     Q   +  +K+LW    P K+ I  WR   N + T   LK++ +    +C  C +  ET EHVF  C  T +IW  L+         + F+    W+   +  ST + +     + W IW A+N
Sbjct:   69 FNEADAKRILSIPLSQNPLHDFVSWLHTRTGIYTVKSAYVMARTESAHLYTSASGRGATSNQTSTSKEWKRLWGIRAPPKVRIILWRFAHNCLPTGQQLKSRNIPAPDVCYHCGRE-ETMEHVFLTCQYTAEIWRELKRVYGMATRHINFVNAGQWLFDFLARSTEQEATILAISFWRIWEARN 251          

HSP 2 Score: 26.1794 bits (56), Expect = 1.965e-13
Identity = 11/28 (39.29%), Postives = 19/28 (67.86%), Query Frame = -2
Query: 1002 KGLLIARLQWKVGNRQSIKIEEDFWVPN 1085
            K LL   + W+ GN ++I++ +D WVP+
Sbjct:    4 KRLLDRGIIWRGGNGENIRLAQDKWVPD 31          
BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy TrEMBL
Match: A0A0A9TVZ9_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.014e-13
Identity = 52/184 (28.26%), Postives = 81/184 (44.02%), Query Frame = -3
Query:  479 FSEEVAQKILLIPLAQHTHEHFLSWRGEASREYFVRSGYKIL-----------LQRNENYRQKEINTCYKKLWSCDLPSKINITAWRVTLNFILTLVNLKAKRLINEAICQRCLQGLETREHVFRDCTATKKIWENLEFTRPQTLSQVEFMEWFTWI---MLHSTREVSQTFICALWAIWSAKN 988
            F+E  A++IL IPL+Q+    F+SW    +  Y V+S Y +              R     Q   +  +K+LW    P K+ I  WR   N + T   LK++ +    +C  C +  ET EHVF  C  T +IW  L+         + F+    W+   +  ST + +     + W IW A+N
Sbjct:   69 FNEADAKRILSIPLSQNPLHDFVSWLHTRTGIYTVKSAYVMARTESAHLYTSASGRGATSNQTSTSKEWKRLWGIRAPPKVRIILWRFAHNCLPTGQQLKSRNIPAPDVCYHCGRE-ETMEHVFLTCQYTAEIWRELKRVYGMATRHINFVNAGQWLFDFLARSTEQEATILAISFWRIWEARN 251          

HSP 2 Score: 26.1794 bits (56), Expect = 2.014e-13
Identity = 11/28 (39.29%), Postives = 19/28 (67.86%), Query Frame = -2
Query: 1002 KGLLIARLQWKVGNRQSIKIEEDFWVPN 1085
            K LL   + W+ GN ++I++ +D WVP+
Sbjct:    4 KRLLDRGIIWRGGNGENIRLAQDKWVPD 31          
BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy TrEMBL
Match: M5XIV5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025799mg PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.427e-13
Identity = 47/188 (25.00%), Postives = 82/188 (43.62%), Query Frame = -3
Query:  461 QMWRVGFSEEVAQKILLIPLAQHTHEHFLSWRGEASREYFVRSGYKILLQRN------ENYRQKEINTCYKKLWSCDLPSKINITAWRVTLNFILTLVNLKAKRLINEAICQRCLQGLETREHVFRDCTATKKIWENLEFTRPQTLSQVEFMEWFTWIMLHSTREVSQTFICALWAIWSAKNKWMYEN 1006
            ++ +  F E+  + IL IPLA    E  L    + S +Y V+SGY +   +       E    ++    +KKLW   + +KI    WR    F+ +  NL  ++++N  IC RC + +E+  H          IW   E           F E +  +++ S++E    F    W IW+ +N  +++ 
Sbjct:  627 ELLKANFWEQEVKAILQIPLASIHREDKLICHYDRSGKYSVKSGYMVACMKKQRENGMEGSSTQDGTLLWKKLWRLQVLNKIKFFLWRCIWGFLPSRQNLYHRKILNSPICPRCGKKVESINHA---------IWACNESANRHEWRITSFKELWQSVIVVSSKEEVDLFAFLCWDIWNDRNNLLFQG 805          

HSP 2 Score: 40.0466 bits (92), Expect = 3.427e-13
Identity = 21/47 (44.68%), Postives = 27/47 (57.45%), Query Frame = -2
Query: 1005 FLSSELGSLPSYTWKGIWASKGLLIARLQWKVGNRQSIKIEEDFWVP 1145
            FL S LG  PS  W  +   K LL A L+W+V N + I + +D WVP
Sbjct:  549 FLESGLGYQPSLIWSSLIWGKDLLKAGLRWRVENGEDIHVYQDRWVP 595          
BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy TrEMBL
Match: M8B4I9_TRIUA (Cyclopropane-fatty-acyl-phospholipid synthase OS=Triticum urartu GN=TRIUR3_11871 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.669e-13
Identity = 60/202 (29.70%), Postives = 95/202 (47.03%), Query Frame = -3
Query:  440 QMWRVGFSEEVAQKILLIPLAQHTHEHFLSWRGEASREYFVRSGYKI---LLQRNENYRQKEIN-------TCYKKLWSCDLPSKINITAWRVTLNFILTLVNLKAKRLINEAICQRCLQGLETREHVFRDCTATKKIWE--NLEFTRPQTLSQVEFMEWFTWIMLHSTREVSQTFICALWAIWSAKNKWMYENHR-RP*GW 1006
            Q+ R  F+ E A  IL IP+ QH HE FL+W+ +    + VRS Y++   +L+R    +Q E +         +++LW    P K++   WRV  N    L N++   +  +  C  C +  E   H+F  C   KK+W   +LE  R   L  +   E   +I      E     IC LW  W+ +NK  ++ +R +P G+
Sbjct:  966 QLVRQTFNTEEAAVILKIPVFQH-HEDFLAWQFDTKELFSVRSAYRVQIDMLKRQARRQQGESSLGDTGNSKLWQELWKVKCPGKVHHFMWRVAHNSHPMLRNIERIGVELDTTCVICHRLPEDGSHLFFRCKEVKKVWRVCDLEAIRLDLLQCLSPHELLLYIFA-LPEEKKLKIICLLWLWWTERNKANHKQNRAKPEGF 1165          

HSP 2 Score: 30.0314 bits (66), Expect = 4.669e-13
Identity = 13/43 (30.23%), Postives = 23/43 (53.49%), Query Frame = -2
Query:  987 SYTWKGIWASKGLLIARLQWKVGNRQSIKIEEDFWVPNVESRL 1115
            SY W+ I     ++   + W+VG  ++I+I +D W+P    R 
Sbjct:  897 SYVWRSILQGVEVIKEGMVWRVGTGENIRIWQDPWLPTCAVRF 939          
BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy TrEMBL
Match: A0A061F9K1_THECC (Retrotransposon, unclassified-like protein OS=Theobroma cacao GN=TCM_033177 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.237e-12
Identity = 46/181 (25.41%), Postives = 73/181 (40.33%), Query Frame = -3
Query:  464 RVGFSEEVAQKILLIPLAQHTHEHFLSWRGEASREYFVRSGYKIL--LQRNENYRQKEINTCYKKLWSCDLPSKINITAWRVTLNFILTLVNLKAKRLINEAICQRCLQGLETREHVFRDCTATKKIWENLEFTRPQTLSQVEFM-EWFTWIMLHSTREVSQTFICALWAIWSAKNKWMYE 997
            RV F       IL +PL+      +L+W       Y  + GYK+L    R +      I    KK W  ++P KI +  WRV    + T   L  + +   A    C   LE   H+  +C+  K +W   ++       Q   + EWF   +    R + +   C +WAIW   N  +++
Sbjct:   78 RVCFPPHECSIILALPLSLRFLADWLAWHHSRDGNYTTKLGYKLLSSTSRTDVSTSGNIIPECKKFWCLNIPRKIFLFIWRVLHGCLPTQATLNRRNIAINACYPMCNADLEMDCHILCECSFAKAVWLACKWGFCDNDHQFSSLKEWFLLRLQKLDRIIVEELCCVMWAIWKGHNSLVFK 258          

HSP 2 Score: 36.5798 bits (83), Expect = 1.237e-12
Identity = 19/49 (38.78%), Postives = 30/49 (61.22%), Query Frame = -2
Query:  984 LGSLPSYTWKGIWASKGLLIARLQWKVGNRQSIKIEEDFWVPNVESRLL 1130
            +GS PSY W  I  S+ L+   + WK+G+ Q+I+ + D W+P   S L+
Sbjct:    1 MGSNPSYLW-SIRESQSLINRGVSWKIGDGQNIRAKLDNWIPYDTSHLV 48          
BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy TrEMBL
Match: M5WGA2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023640mg PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.468e-12
Identity = 54/190 (28.42%), Postives = 77/190 (40.53%), Query Frame = -3
Query:  452 FSEEVAQKILLIPLAQHTHEHFLSWRGEASREYFVRSGY----KILLQRN---ENYRQKEINTC---YKKLWSCDLPSKINITAWRVTLNFILTLVNLKAKRLINEAICQRCLQGLETREHVFRDCTATKKIWENLE-FTRPQTLSQVEFMEWFTWIMLHSTREVSQTFICALWAIWSAKNKWMYENHRR 988
            FS E    I  IPL+       L W  E   +Y VRSGY    ++LLQ++    N  +  I  C   +KK+W   +P K+ I  WR  LN + T  NL  + +     C  C    ET  HV   C      W     +    T +  EF  WF          V +  +  LW  W  +N+ ++   +R
Sbjct:   73 FSAEEVNCIRNIPLSFRHPPDTLIWHFERDGQYTVRSGYEVARRVLLQQDGDDTNMNRGPIVACEQVWKKIWKARVPPKVCIFIWRALLNILPTKDNLIHRSISELGGCVFC-GAEETVAHVLLRCPMAIASWSLFPAWAHFNTDATEEFKMWFQGFAADHPLHVLERVMVCLWMPWYERNQKVWAGRQR 261          

HSP 2 Score: 38.891 bits (89), Expect = 1.468e-12
Identity = 16/48 (33.33%), Postives = 30/48 (62.50%), Query Frame = -2
Query:  993 SELGSLPSYTWKGIWASKGLLIARLQWKVGNRQSIKIEEDFWVPNVES 1136
            +++   PSY W+ +  ++ L+    +W++GN  S++I  D W+PN ES
Sbjct:    1 AQIRHCPSYIWQSLCNARVLIEKGSRWQIGNGHSVRIWGDRWLPNSES 48          
BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy TrEMBL
Match: F4NCJ4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 3.689e-12
Identity = 47/182 (25.82%), Postives = 82/182 (45.05%), Query Frame = -3
Query:  449 FSEEVAQKILLIPLAQHTHEHFLSWRGEASREYFVRSGYKILLQRNENYRQKEINTCYKKLWSCDLPSKINITAWRVTLNFILTLVNLKAKRLINEAICQRCLQGLETREHVFRDCTATKKIWENLE--FTRPQTLSQVEFMEWFTWIMLHSTREVSQTFICALWAIWSAKNKWMYENHRRP 988
            F+E   Q IL IPL+    +  L+W       Y V++ Y  +L +  N    + +  +  LWS ++  K+    WR   + +     L+ + LI+EA C  C +  ET+ H+F  C  + K+WE L      P    +        W  + +  +V Q     LW +W  +N+ ++E+  +P
Sbjct:  986 FNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAY--MLGKGGNL--DDFHRVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHLFYRCPMSLKLWEELGSYILLPGIEDEAMCDTLVRWSQMDA--KVVQKGCYILWNVWVERNRRVFEHTSQP 1161          

HSP 2 Score: 38.5058 bits (88), Expect = 3.689e-12
Identity = 19/51 (37.25%), Postives = 29/51 (56.86%), Query Frame = -2
Query:  984 SELGSLPSYTWKGIWASKGLLIARLQWKVGNRQSIKIEEDFWVPNVESRLL 1136
            + LG   SY+W+ IW +K L++  L W+VG+   I I    WV + E R +
Sbjct:  905 ARLGYSHSYSWRSIWGAKSLVLEGLIWRVGDGTKIDIWSAPWVGDEEGRFI 955          
BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy TrEMBL
Match: M5W5K8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020282mg PE=4 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 4.478e-12
Identity = 50/161 (31.06%), Postives = 66/161 (40.99%), Query Frame = -3
Query:  560 FQMWRVGFSEEVAQKILLIPLAQHTHEHFLSWRGEASREYFVRSGY----KILLQRNE---NYRQKEINTC---YKKLWSCDLPSKINITAWRVTLNFILTLVNLKAKRLINEAICQRCLQGLETREHVFRDCTATKKIWENLE-FTRPQTLSQVEFMEWF 1009
             Q W   FS E    I  IPL+       L W  E   +Y VRSG+    ++LLQ++    N     I  C   +KK+W   +P K+ I  WR  LN + T  NL  +R+     C  C    ET  HV   C      W     +    T +  EF  WF
Sbjct: 1340 LQAW---FSAEEVNCIRNIPLSFRHPPDILIWHFERDGQYTVRSGHDVARRVLLQQDGDDTNMNGGPIVACEQVWKKIWKARVPPKVRIFIWRALLNILPTKDNLIHRRISELRGCVFC-GAEETVAHVLLRCPMAIASWSLFPAWAHFNTDATEEFKMWF 1496          

HSP 2 Score: 44.669 bits (104), Expect = 4.478e-12
Identity = 18/50 (36.00%), Postives = 32/50 (64.00%), Query Frame = -2
Query:  993 LSSELGSLPSYTWKGIWASKGLLIARLQWKVGNRQSIKIEEDFWVPNVES 1142
            L +++G  PSY W+ +  ++ L+    +W++GN  S++I  D W+PN ES
Sbjct: 1259 LEAQIGHSPSYIWQSLCKARVLIEKGSRWRIGNGHSVRIWGDRWLPNSES 1308          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
C5YAU3_SORBI1.354e-1328.65Putative uncharacterized protein Sb06g020406 (Frag... [more]
I6M4U0_MAIZE1.824e-1327.57Putative ZmL1 non-LTR retrotransposon protein OS=Z... [more]
A0A0A8XVJ3_ARUDO1.965e-1328.26Uncharacterized protein OS=Arundo donax PE=4 SV=1[more]
A0A0A9TVZ9_ARUDO2.014e-1328.26Uncharacterized protein OS=Arundo donax PE=4 SV=1[more]
M5XIV5_PRUPE3.427e-1325.00Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
M8B4I9_TRIUA4.669e-1329.70Cyclopropane-fatty-acyl-phospholipid synthase OS=T... [more]
A0A061F9K1_THECC1.237e-1225.41Retrotransposon, unclassified-like protein OS=Theo... [more]
M5WGA2_PRUPE1.468e-1228.42Uncharacterized protein (Fragment) OS=Prunus persi... [more]
F4NCJ4_BETVU3.689e-1225.82Uncharacterized protein OS=Beta vulgaris subsp. vu... [more]
M5W5K8_PRUPE4.478e-1231.06Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0011163 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 61..151
e-value: 5.6E-16
score: 59.0
NoneNo IPR availablePANTHERPTHR25952:SF189COPPER ION BINDING / ELECTRON CARRIER PROTEINcoord: 50..207
NoneNo IPR availablePANTHERPTHR25952FAMILY NOT NAMEDcoord: 50..207

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0011163 ID=g.arboreum_cottongen_reftransV1_0011163; Name=g.arboreum_cottongen_reftransV1_0011163; organism=Gossypium arboreum; type=contig; length=1146bp
AGTGTCGACATCATTTTGCCCAATCAAAAAGATCTGATTTCTTCCCGTCA
TTTCGTCTGCCCTTGCTTAGTAAAGACGTTTTCAGATTTCCGATGAAAAG
ATTTTACCTTCCCAGCTGTTAGTCTTCTTCCTTTGATCTTTTCTTTTCCA
TCGTTGCCTTCTTCTATTTGCAGCCTGTCTTCCACTCATTTTCCTCTTCT
AAAGATTTTTGTACAGCCATGTATTTTCCTGCTCGATAGATCGTCTTCTC
CTCTTTTGTCCCCGCAACTGGTGTTGTTATTATTTCCAATTAGATTATTT
CCATCTCTGATCTACCTCTGCTTCAGTAATACCATTTCCGTCGGACCCAG
GAGCAAGGATCTGTTCTGTCTGTTATCAAAGGCAGCATCGAAGTTTATCT
TGAAGAAATCTTTTTTCGGGGGCCTCCATAACTCGGATTCCAACCTTAAG
GTCTCCTGTGGTTTTCATACATCCATTTGTTTTTAGCTGACCAGATAGCC
CATAAAGCGCAGATGAAGGTCTGACTAACTTCTCTTGTACTGTGGAGCAT
GATCCAGGTAAACCATTCCATAAACTCTACTTGTGAAAGAGTCTGAGGCC
GTGTAAACTCTAAGTTTTCCCATATTTTTTTTGTGGCAGTGCAATCCCGG
AAGACGTGTTCTCTTGTTTCCAGCCCTTGCAAGCACCTCTGACAAATGGC
CTCATTTATTAGTCGCTTAGCTTTTAGGTTTACTAGAGTAAGGATAAAGT
TAAGGGTGACTCTCCAGGCTGTAATATTAATTTTTGAAGGGAGGTCACAG
CTCCAGAGTTTTTTGTAACATGTATTAATTTCCTTTTGCCTATAATTTTC
ATTTCTTTGTAATAGGATTTTGTAACCGCTGCGCACAAAATACTCTCTAG
ATGCCTCGCCTCGCCAACTCAGAAAGTGTTCGTGAGTGTGCTGAGCCAGT
GGAATTAACAAGATCTTTTGAGCCACCTCTTCAGAGAAGCCGACTCTCCA
CATTTGGAACCCAGAAATCTTCCTCAATTTTGATACTTTGCCTATTACCC
ACTTTCCACTGTAATCTTGCAATCAGCAGTCCCTTTGAAGCCCATATACC
TTTCCAAGTATATGATGGTAAGCTCCCTAACTCTGAGCTTAAAAAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR026960RVT-Znf