g.arboreum_cottongen_reftransV1_0002348, g.arboreum_cottongen_reftransV1_0002348 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0002348
Unique Nameg.arboreum_cottongen_reftransV1_0002348
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1055
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr11chromosomeg.arboreum_cottongen_reftransV1_0002348:1..1054 .
Chr11:26940035..26943174 +
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy TrEMBL
Match: A0A087HRG8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G294300 PE=4 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 4.341e-82
Identity = 152/276 (55.07%), Postives = 196/276 (71.01%), Query Frame = 3
Query:    3 EGWRESNGSRWQVLLTHSQMVGLADILDMYYEDVYTLPKKQLHSGMVANYNSLTKAKRNSSFLKVXXXXXXXXXXXXXXXXXXXXXFPYLGRGGKYLGKSR----SPSSIIESTTIQSVDAEKLETFCVLVIQKIKDAFGWPGEIATETNIGAWIGEIPSCLKAPHQANSNSEDNSTSFADVEKMDADIKSSVQDIAGYQVVLSTEGKIVGFQPTSRVGVNQWALNPLTKELYGGKKLSPGLIEPRLEIQLPNGIVVLELLMSVNPDSCFALARPI 818
            EGWR+S+ ++W+VLLTHSQMVGLA+ LDMY+ED+Y+LP+KQL      NY  L   KR  SFLK++S  IASGILL+ + + + F FP   +  KY GK +    S S+++     QS D+ +L++FC LV+ K+KDA+ W GEI  E +IG WIGE+P  LK   +A S  +   TS + +EK++ D K+S QDIA YQVVLS+EGKI+GFQPTSRVGVN WA NPL KELYG +KLSPGLIEP L+   P  +VVLELLMSVN +  FAL RP+
Sbjct:  337 EGWRKSSENKWEVLLTHSQMVGLAEALDMYFEDIYSLPRKQLPCNYSGNYADLPNEKRGLSFLKLLSVTIASGILLLAVGAAAQFCFPQQSQR-KYPGKHQDVLWSESALLSH---QSSDSSELDSFCGLVVNKLKDAYCWEGEITLERSIGTWIGEVPEYLKETSRAKSGKDHIDTSSSLLEKLNEDAKASAQDIATYQVVLSSEGKIIGFQPTSRVGVNHWAANPLAKELYGRRKLSPGLIEPGLKSHPPTKVVVLELLMSVNSNRPFALVRPL 608          
BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy TrEMBL
Match: R0GP76_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10011901mg PE=4 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 7.812e-81
Identity = 152/273 (55.68%), Postives = 197/273 (72.16%), Query Frame = 3
Query:    3 EGWRESNGSRWQVLLTHSQMVGLADILDMYYEDVYTLPKKQLHSGMVANYNSLTKAKRNSSFLKVXXXXXXXXXXXXXXXXXXXXXFPYLGRGGKYLGKSRSPS-SIIESTTIQSVDAEKLETFCVLVIQKIKDAFGWPGEIATETNIGAWIGEIPSCLKAPHQANSNSEDNSTSFADVEKMDADIKSSVQDIAGYQVVLSTEGKIVGFQPTSRVGVNQWALNPLTKELYGGKKLSPGLIEPRLEIQLPNGIVVLELLMSVNPDSCFALARPI 818
            EGWR+S+ ++W+VLLTHSQMVGLA+ LD+Y+ED+Y+LPKKQL   +  NY +L   KR  S LK+IS  +ASGILL+ +S+ + F FP      KY G+S+    S  E  + QS D+ KL++FC L++ K+KDA+ W GEI  E++IGAWIGE+P  LK   +A S  +   +S + +EK++ D K+S QDIA YQVVLS EGKI+GFQPTSRV VN WA NPL +ELY GKKLSPGLIEP L+ + P  +VVLELLMSVN D  FAL RP+
Sbjct:  335 EGWRKSSENKWEVLLTHSQMVGLAEALDIYFEDIYSLPKKQLPCDVSGNYANLPNEKRGLSLLKIISVTMASGILLLAVSAAAQFCFPQKSER-KYPGRSQDILWSENELLSHQSSDSSKLDSFCGLLVNKLKDAYCWVGEITLESSIGAWIGEVPDYLKETSRAKSVDDPIVSSSSLLEKLNEDAKASAQDIATYQVVLSPEGKIIGFQPTSRVAVNHWAANPLARELYEGKKLSPGLIEPGLKSRPPTKVVVLELLMSVNSDRPFALVRPL 606          
BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy TrEMBL
Match: D7KCX8_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473074 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.768e-80
Identity = 151/274 (55.11%), Postives = 194/274 (70.80%), Query Frame = 3
Query:    3 EGWRESNGSRWQVLLTHSQMVGLADILDMYYEDVYTLPKKQLHSGMVANYNSLTKAKRNSSFLKVXXXXXXXXXXXXXXXXXXXXXFPYLGRGGKYLGKSRSPSSIIESTTI--QSVDAEKLETFCVLVIQKIKDAFGWPGEIATETNIGAWIGEIPSCLKAPHQANSNSEDNSTSFADVEKMDADIKSSVQDIAGYQVVLSTEGKIVGFQPTSRVGVNQWALNPLTKELYGGKKLSPGLIEPRLEIQLPNGIVVLELLMSVNPDSCFALARPI 818
            EGWR+S+ ++W+VLLTHSQMVGLA+ LD+Y+ED+Y+LP+KQL   +  NY +L   KR  S LK IS  +ASGILL+ +S+ + F  P+     KY GK R     +ES  +  QS D  +L++FC L++ K+KDA+ W GEI  E++IGAWIGE+P  LK   +A S  +   TS + +EK++ D K++ QDIA YQVVLS EGKI+GFQPTSRV VN WA NPL KELYGGKKL PGLIEP L+   P  +VVLELLMSVN D  FAL RP+
Sbjct:  342 EGWRKSSENKWEVLLTHSQMVGLAEALDIYFEDIYSLPRKQLPCDVPGNYANLPSEKRGLSLLKFISVTMASGILLLAVSAAAQFCLPHKSER-KYPGK-RQDILWLESELLSHQSSDFSELDSFCGLLVNKLKDAYSWVGEITLESSIGAWIGEVPDYLKETSRAKSVEDHIVTSSSLLEKLNEDAKAAAQDIATYQVVLSAEGKIIGFQPTSRVAVNHWAANPLAKELYGGKKLKPGLIEPGLKSHPPKKVVVLELLMSVNSDRPFALVRPL 613          
BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy TrEMBL
Match: W9S784_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015035 PE=4 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.882e-79
Identity = 153/295 (51.86%), Postives = 195/295 (66.10%), Query Frame = 3
Query:    3 EGWRESNGSRWQVLLTHSQM-----------------------VGLADILDMYYEDVYTLPKKQLHSGMVANYNSLTKAKRNSSFLKVXXXXXXXXXXXXXXXXXXXXXFPYLGRGGKYLGKSRSPSSIIESTTIQSVDAEKLETFCVLVIQKIKDAFGWPGEIATETNIGAWIGEIPSCLKAPHQANSNSEDNSTSFADVEKMDADIKSSVQDIAGYQVVLSTEGKIVGFQPTSRVGVNQWALNPLTKELYGGKKLSPGLIEPRLEIQLPN-GIVVLELLMSVNPDSCFALARP 815
            EGWR+S+ + W+VL THSQM                       VGLAD++DMYYED+YTLP K+L  G V N+ +L   KRNS  LK++S  +ASGI +I IS++     P+L  G          SS +ES   QS+D  +LE FC+ V+++IKDA GWPG+I  E ++G W G +P  L+   Q +S+SE  ST+    E +DA+IK+S QDIA YQVVLS +GK+VGFQPTSRV VNQWA NPL KELYGG+ LSPGLIEP L +  P+ GIVV+ELLMS  PD+CFALARP
Sbjct:  355 EGWRKSSDNMWEVLFTHSQMECSIGSLELSLILKLNGNVYDGEVGLADVIDMYYEDLYTLPNKELSCGFVRNFTNLPNKKRNSVLLKMLSITVASGIFIIAISALGQLCLPHLKVGNYIRESQSLSSSEVESLLHQSLDDAELEAFCISVVKRIKDALGWPGDITGERSVGVWTGILPEYLRLVVQNDSDSEGISTT-TPAESIDAEIKTSAQDIANYQVVLSLDGKLVGFQPTSRVAVNQWAGNPLAKELYGGRNLSPGLIEPGLNVHRPDGGIVVIELLMSTKPDACFALARP 648          

HSP 2 Score: 110.153 bits (274), Expect = 4.946e-23
Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = 3
Query:  612 KIVGFQPTSRVGVNQWALNPLTKELYGGKKLSPGLIEPRLEIQLPN-GIVVLELLMSVNPDSCFALARP 815
            K+VGFQPTSRV VNQWA NPL KELYGG+ LSPGLIEP L +  P+ GIVV+ELLMS  PD+CFALARP
Sbjct:  649 KLVGFQPTSRVAVNQWAGNPLAKELYGGRNLSPGLIEPGLNVHRPDGGIVVIELLMSTKPDACFALARP 717          
BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy TrEMBL
Match: Q9SHP4_ARATH (F1K23.23 OS=Arabidopsis thaliana GN=At1g28530 PE=4 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 9.853e-78
Identity = 147/273 (53.85%), Postives = 191/273 (69.96%), Query Frame = 3
Query:    3 EGWRESNGSRWQVLLTHSQMVGLADILDMYYEDVYTLPKKQLHSGMVANYNSLTKAKRNSSFLKVXXXXXXXXXXXXXXXXXXXXXFPYLGRGGKYLGKSRSPS-SIIESTTIQSVDAEKLETFCVLVIQKIKDAFGWPGEIATETNIGAWIGEIPSCLKAPHQANSNSEDNSTSFADVEKMDADIKSSVQDIAGYQVVLSTEGKIVGFQPTSRVGVNQWALNPLTKELYGGKKLSPGLIEPRLEIQLPNGIVVLELLMSVNPDSCFALARPI 818
            EGWR+S+ ++W+VLLTHSQMVGLA+ LD+Y+ED Y+LP+KQL   +  NY +L   K+  S LK IS  +ASGI L+ +S+ + F  P      KY GK +    S  E  + QS D+ +L++FC L++ K+KDA+ W GEI  E++IGAWIGE+P  LK   +A S  +   TS + +E ++ D K+S QDIA YQVVLS+EGKI+GFQPTSRV VN WA NPL +ELYGGKKL PGLIEP L+   P  +VVLELLMSVN D  FAL RP+
Sbjct:  339 EGWRKSSENKWEVLLTHSQMVGLAEALDIYFEDTYSLPRKQLPCDVPGNYANLPNEKKGLSLLKFISVTMASGIFLLAVSAAAQFCLPQKSER-KYPGKRQEILWSESELLSHQSSDSSELDSFCGLLVNKLKDAYSWVGEITLESSIGAWIGEVPDYLKETSRAKSVEDHIVTSSSLLEILNEDAKASAQDIATYQVVLSSEGKIIGFQPTSRVAVNHWAANPLARELYGGKKLKPGLIEPGLKSHPPKKVVVLELLMSVNSDRPFALVRPL 610          
BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy TrEMBL
Match: Q84TH8_ARATH (Putative uncharacterized protein At1g28530 OS=Arabidopsis thaliana GN=At1g28530 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.095e-77
Identity = 147/273 (53.85%), Postives = 191/273 (69.96%), Query Frame = 3
Query:    3 EGWRESNGSRWQVLLTHSQMVGLADILDMYYEDVYTLPKKQLHSGMVANYNSLTKAKRNSSFLKVXXXXXXXXXXXXXXXXXXXXXFPYLGRGGKYLGKSRSPS-SIIESTTIQSVDAEKLETFCVLVIQKIKDAFGWPGEIATETNIGAWIGEIPSCLKAPHQANSNSEDNSTSFADVEKMDADIKSSVQDIAGYQVVLSTEGKIVGFQPTSRVGVNQWALNPLTKELYGGKKLSPGLIEPRLEIQLPNGIVVLELLMSVNPDSCFALARPI 818
            EGWR+S+ ++W+VLLTHSQMVGLA+ LD+Y+ED Y+LP+KQL   +  NY +L   K+  S LK IS  +ASGI L+ +S+ + F  P      KY GK +    S  E  + QS D+ +L++FC L++ K+KDA+ W GEI  E++IGAWIGE+P  LK   +A S  +   TS + +E ++ D K+S QDIA YQVVLS+EGKI+GFQPTSRV VN WA NPL +ELYGGKKL PGLIEP L+   P  +VVLELLMSVN D  FAL RP+
Sbjct:  340 EGWRKSSENKWEVLLTHSQMVGLAEALDIYFEDTYSLPRKQLPCDVPGNYANLPNEKKGLSLLKFISVTMASGIFLLAVSAAAQFCLPQKSER-KYPGKRQEILWSESELLSHQSSDSSELDSFCGLLVNKLKDAYSWVGEITLESSIGAWIGEVPDYLKETSRAKSVEDHIVTSSSLLEILNEDAKASAQDIATYQVVLSSEGKIIGFQPTSRVAVNHWAANPLARELYGGKKLKPGLIEPGLKSHPPKKVVVLELLMSVNSDRPFALVRPL 611          
BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy TrEMBL
Match: A0A0D3BIQ1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 3.069e-77
Identity = 149/274 (54.38%), Postives = 195/274 (71.17%), Query Frame = 3
Query:    3 EGWRESNGSRWQVLLTHSQMVGLADILDMYYEDVYTLPKKQLHSGMVANYNSLTKAKRNSSFLKVXXXXXXXXXXXXXXXXXXXXXFPYLGRGGKYLGKSRSPS-SIIESTTIQSVDAEKLETFCVLVIQKIKDAFGWPGEIATETNIGAWIGEIPSCLKAPHQANSNSEDNSTSFADVEKMDADIKSSVQDIAGYQVVLSTEGKIVGFQPTSRVGVNQWALNPLTKELYGGKKLSPGLIEPRLEI-QLPNGIVVLELLMSVNPDSCFALARPI 818
            EGWR+S+ ++W+VLLTHSQMVGLA+ LD+Y+ED+Y+LP+KQL      NY +L   KR  S LK+IS  +ASGILL+ +S+ + FS P      KY GK +  S S  E  + QS D  +LE+FC LV+ K+KDA+ W GEI  E++IGAWIGE+P  LK   +A +  ++  T  + +EK++ D K+S Q+IA YQVVLS+EGKI+GFQPTSRV VN W+ NPL KELY G+KLSPGLIE  L+  + P  +VVLELLMSVN D  FAL RP+
Sbjct:  344 EGWRKSSENKWEVLLTHSQMVGLAEALDIYFEDIYSLPRKQLPCDAFGNYANLPSEKRGLSLLKMISVTVASGILLLAVSAAAQFSIPQKSER-KYPGKRQDISWSESELLSHQSSDTSELESFCGLVVNKLKDAYSWVGEITVESSIGAWIGEVPDYLKETSRAKATEDNVGTGSSLLEKLNEDAKASAQEIATYQVVLSSEGKIIGFQPTSRVAVNHWSANPLAKELYRGRKLSPGLIERGLKSGRPPTKVVVLELLMSVNSDRPFALVRPL 616          
BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy TrEMBL
Match: A0A078DSJ3_BRANA (BnaA08g18260D protein OS=Brassica napus GN=BnaA08g18260D PE=4 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.851e-76
Identity = 150/275 (54.55%), Postives = 196/275 (71.27%), Query Frame = 3
Query:    3 EGWRESNGSRWQVLLTHSQMVGLADILDMYYEDVYTLPKKQLHSGMVANYNSLTKAKRNSSFLKVXXXXXXXXXXXXXXXXXXXXXFPYLGRGGKYLGKSRSPS-SIIESTTIQSVDAEKLETFCVLVIQKIKDAFGWPGEIATETNIGAWIGEIPSCLKAPHQANSNSEDNSTSFADVEKMDADIKSSVQDIAGY-QVVLSTEGKIVGFQPTSRVGVNQWALNPLTKELYGGKKLSPGLIEPRLEI-QLPNGIVVLELLMSVNPDSCFALARPI 818
            EGWR+S+ ++W+VLLTHSQMVGLA+ LD+Y+ED+Y+LP+KQL      NY +L   KR  S LK+IS  +ASGILL+ +S+ + FS P      KY GKS+  S S  E  + QS D  +LE+FC LV+ K+KDA+ W GEI  E++IGAWIGE+P  LK   +A +  ++  T  + +EK++ D K+S Q+IA Y QVVLS+EGKI+GFQPTSRV VN W+ NPL KELY G+KLSPGLIE  L+  + P  +VVLELLMSVN D  FAL RP+
Sbjct:  346 EGWRKSSENKWEVLLTHSQMVGLAEALDIYFEDIYSLPRKQLPCDAFGNYGNLPNEKRGLSLLKMISVTVASGILLLAVSAAAQFSIPQKSER-KYPGKSQDISWSESELLSHQSSDTSELESFCGLVVNKLKDAYSWVGEITVESSIGAWIGEVPDYLKETSRAKATEDNVGTGSSLLEKLNEDAKASAQEIATYQQVVLSSEGKIIGFQPTSRVAVNHWSANPLAKELYSGRKLSPGLIERGLKSGRPPTKVVVLELLMSVNSDRPFALVRPL 619          
BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy TrEMBL
Match: A0A0B2RG65_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_042662 PE=4 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.781e-75
Identity = 140/273 (51.28%), Postives = 186/273 (68.13%), Query Frame = 3
Query:    6 GWRESNGSRWQVLLTHSQMVGLADILDMYYEDVYTLPKKQLHSGMVANYNSLTKAKRNSSFLKVXXXXXXXXXXXXXXXXXXXXXFPYLGRGGKYLGKSRS-PSSIIESTTIQSVDAEKLETFCVLVIQKIKDAFGWPGEIATETNIGAWIGEIPSCLKAPHQANSNSEDNSTSFADVEKMDADIKSSVQDIAGYQVVLSTEGKIVGFQPTSRVGVNQWALNPLTKELYGGKKLSPGLIEPRLEIQLPNGIVVLELLMSVNPDSCFALARPIQ 821
            GW++S  +RW+VLLTHSQMV LA+ LD+YY D Y+LP KQL  G+ A + +++  K NS F K +S  +ASGI L+ IS++  F  P+L +  K+  + RS PSS ++       D +KLE +CVL I K K  FGW GEI  E  IG WIGE+P+ L+          +   + +  E +DAD K S+QDIA YQVV S+EGKIVGFQP SRV VN W++NPL +ELYGGKKLSP +IEP L++ LP  ++V+ELLMS+NPD+ FALARP +
Sbjct:  339 GWKKSAENRWEVLLTHSQMVQLAETLDIYYVDPYSLPNKQLSCGVAAKFANVSNKKGNS-FPKFLSLALASGIFLVAISALGQFCLPWLCKERKHSVEHRSLPSSEVDVAINDFFDTQKLEEYCVLAIAKAKGTFGWSGEIKVEDGIGVWIGELPAYLRG---------EGVDTLSTSENIDADAKVSIQDIASYQVVFSSEGKIVGFQPLSRVAVNHWSVNPLARELYGGKKLSPSIIEPGLKVSLPEKVIVVELLMSINPDAYFALARPFR 601          
BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy TrEMBL
Match: I1L9A2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.857e-75
Identity = 140/273 (51.28%), Postives = 186/273 (68.13%), Query Frame = 3
Query:    6 GWRESNGSRWQVLLTHSQMVGLADILDMYYEDVYTLPKKQLHSGMVANYNSLTKAKRNSSFLKVXXXXXXXXXXXXXXXXXXXXXFPYLGRGGKYLGKSRS-PSSIIESTTIQSVDAEKLETFCVLVIQKIKDAFGWPGEIATETNIGAWIGEIPSCLKAPHQANSNSEDNSTSFADVEKMDADIKSSVQDIAGYQVVLSTEGKIVGFQPTSRVGVNQWALNPLTKELYGGKKLSPGLIEPRLEIQLPNGIVVLELLMSVNPDSCFALARPIQ 821
            GW++S  +RW+VLLTHSQMV LA+ LD+YY D Y+LP KQL  G+ A + +++  K NS F K +S  +ASGI L+ IS++  F  P+L +  K+  + RS PSS ++       D +KLE +CVL I K K  FGW GEI  E  IG WIGE+P+ L+          +   + +  E +DAD K S+QDIA YQVV S+EGKIVGFQP SRV VN W++NPL +ELYGGKKLSP +IEP L++ LP  ++V+ELLMS+NPD+ FALARP +
Sbjct:  345 GWKKSAENRWEVLLTHSQMVQLAETLDIYYVDPYSLPNKQLSCGVAAKFANVSNKKGNS-FPKFLSLALASGIFLVAISALGQFCLPWLCKERKHSVEHRSLPSSEVDVAINDFFDTQKLEEYCVLAIAKAKGTFGWSGEIKVEDGIGVWIGELPAYLRG---------EGVDTLSTSENIDADAKVSIQDIASYQVVFSSEGKIVGFQPLSRVAVNHWSVNPLARELYGGKKLSPSIIEPGLKVSLPEKVIVVELLMSINPDAYFALARPFR 607          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A087HRG8_ARAAL4.341e-8255.07Uncharacterized protein OS=Arabis alpina GN=AALP_A... [more]
R0GP76_9BRAS7.812e-8155.68Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
D7KCX8_ARALL5.768e-8055.11Putative uncharacterized protein OS=Arabidopsis ly... [more]
W9S784_9ROSA2.882e-7951.86Uncharacterized protein OS=Morus notabilis GN=L484... [more]
Q9SHP4_ARATH9.853e-7853.85F1K23.23 OS=Arabidopsis thaliana GN=At1g28530 PE=4... [more]
Q84TH8_ARATH1.095e-7753.85Putative uncharacterized protein At1g28530 OS=Arab... [more]
A0A0D3BIQ1_BRAOL3.069e-7754.38Uncharacterized protein OS=Brassica oleracea var. ... [more]
A0A078DSJ3_BRANA1.851e-7654.55BnaA08g18260D protein OS=Brassica napus GN=BnaA08g... [more]
A0A0B2RG65_GLYSO1.781e-7551.28Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
I1L9A2_SOYBN1.857e-7551.28Uncharacterized protein OS=Glycine max PE=4 SV=1[more]

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BLAST of g.arboreum_cottongen_reftransV1_0002348 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35694:SF1SUBFAMILY NOT NAMEDcoord: 1..259
NoneNo IPR availablePANTHERPTHR35694FAMILY NOT NAMEDcoord: 1..259
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..77
NoneNo IPR availableTMHMMTMhelixcoord: 51..73

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0002348 ID=g.arboreum_cottongen_reftransV1_0002348; Name=g.arboreum_cottongen_reftransV1_0002348; organism=Gossypium arboreum; type=contig; length=1055bp
TTGAAGGATGGAGAGAATCTAACGGGAGTAGGTGGCAAGTTCTTTTGACA
CACTCCCAAATGGTTGGATTGGCTGATATATTAGATATGTACTATGAAGA
TGTTTACACACTGCCCAAGAAACAACTACACAGTGGCATGGTTGCCAATT
ACAACAGCTTGACCAAAGCAAAGAGGAACTCTTCTTTCTTGAAAGTAATA
TCTTCCATCATTGCAAGTGGAATTCTTCTCATTACCATCAGTAGTATCAG
TCTATTTAGTTTTCCTTATCTAGGCAGAGGAGGGAAGTACCTTGGAAAAT
CTCGGTCTCCATCATCAATTATTGAGTCTACAACAATTCAATCTGTAGAT
GCTGAAAAGTTGGAGACATTTTGTGTACTGGTAATCCAAAAGATTAAGGA
TGCTTTTGGCTGGCCTGGTGAAATAGCAACAGAAACCAATATTGGTGCCT
GGATTGGTGAAATACCAAGCTGTCTAAAAGCACCTCATCAAGCTAATTCT
AATAGTGAGGACAATTCAACTAGTTTTGCTGATGTGGAGAAAATGGATGC
TGATATAAAATCATCTGTCCAGGATATTGCTGGTTATCAGGTGGTTTTAT
CAACTGAAGGAAAAATAGTTGGGTTCCAACCTACAAGTCGGGTGGGTGTC
AATCAGTGGGCTTTGAATCCCTTAACAAAAGAGCTATATGGTGGGAAAAA
ACTTTCCCCTGGTTTAATTGAACCTCGTCTCGAAATCCAACTTCCTAATG
GGATTGTTGTACTTGAGCTGTTGATGTCAGTTAACCCAGATTCCTGCTTT
GCATTGGCTAGGCCAATCCAATGATCATTGCTTGGTTTGATTTTAAAGAG
TTAATTGTAATAAAGTCAATGGCATCAATAATCCAGGTCCTTTTCTTTTC
CTTTCATTTTTTTTATTAGCTATTTTGGTTGAAGTTGGAAAACGTGTAAA
GGTACATCTCCAATGAGATTTCATTGGGTGCAGTCTCATTCATATACGTT
TATAATATGTAGAATGTTCTAGCCTTTAGCCATGTTTACAAATGTATGAG
AATGA
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