g.arboreum_cottongen_reftransV1_0017420, g.arboreum_cottongen_reftransV1_0017420 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy TrEMBL
Match: A0A0B0N7B5_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_33371 PE=4 SV=1) HSP 1 Score: 978.393 bits (2528), Expect = 0.000e+0 Identity = 564/564 (100.00%), Postives = 564/564 (100.00%), Query Frame = -1 Query: 325 MEPPKGFLATLWNFICFLPYFXXXXXXXXXXXXIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICXXXXXXXXXXXXXXXXXXXXXXXXXGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKNGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNXXXXXXXXXXXXXXXXXXXXXSHQSKNTVLXXXXXXXXXXXXSQNMSDQESQS 2016 MEPPKGFLATLWNFICFLPYFIGLLLLGTIKGIIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKNGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNKLSEDLSKDSGSSNSSRSSNRSHQSKNTVLRFFSSRSFKRSSSQNMSDQESQS Sbjct: 1 MEPPKGFLATLWNFICFLPYFIGLLLLGTIKGIIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKNGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNKLSEDLSKDSGSSNSSRSSNRSHQSKNTVLRFFSSRSFKRSSSQNMSDQESQS 564
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy TrEMBL
Match: A0A0D2NLD7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G036800 PE=4 SV=1) HSP 1 Score: 969.148 bits (2504), Expect = 0.000e+0 Identity = 554/574 (96.52%), Postives = 561/574 (97.74%), Query Frame = -1 Query: 298 MEPPKGFLATLWNFICFLPYFXXXXXXXXXXXXIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICXXXXXXXXXXXXXXXXXXXXXXXXXGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKNGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNXXXX-XXXXXXXXXXXXXXXXXSHQSKNTVLXXXXXXXXXXXXSQNMSDQESQSVLARDAEIE 2016 MEPPKGFLATLWNFICFLPYFIGLLLLGTIKGIIFC PICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLA+CIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQK+GQYYEIRFL LLPALIAAVLGFLVDFPMISLIA CKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGS+ SSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDL PL+LLEGLFKEC VHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKD+FFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNKLSE KDSGSSNSS SSNRSHQSKNTVLRFFSSRSFKRS+S +MSDQESQSVLARD EIE Sbjct: 1 MEPPKGFLATLWNFICFLPYFIGLLLLGTIKGIIFCFPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAVCIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKDGQYYEIRFLYLLPALIAAVLGFLVDFPMISLIAFCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSMASSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLKPLELLEGLFKECQVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDAFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNKLSEDLSKKDSGSSNSSGSSNRSHQSKNTVLRFFSSRSFKRSTSHSMSDQESQSVLARDVEIE 574
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy TrEMBL
Match: A0A0D2RWN3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G036800 PE=4 SV=1) HSP 1 Score: 955.666 bits (2469), Expect = 0.000e+0 Identity = 552/592 (93.24%), Postives = 559/592 (94.43%), Query Frame = -1 Query: 244 MEPPKGFLATLWNFICFLPYFXXXXXXXXXXXXIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICXXXXXXXXXXXXXXXXXXXXXXXXXGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKNGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNXXXX-XXXXXXXXXXXXXXXXXSHQSKNTVLXXXXXXXXXXXXSQNMSDQESQSVLARDAEIE*CRNRMSIKNHNQFLPEM 2016 MEPPKGFLATLWNFICFLPYFIGLLLLGTIKGIIFC PICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLA+CIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQK+GQYYEIRFL LLPALIAAVLGFLVDFPMISLIA CKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGS+ SSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDL PL+LLEGLFKEC VHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKD+FFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNKLSE KDSGSSNSS SSNRSHQSKNTVLRFFSSRSFKRS+S +M MSIKNHNQFLPEM Sbjct: 1 MEPPKGFLATLWNFICFLPYFIGLLLLGTIKGIIFCFPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAVCIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKDGQYYEIRFLYLLPALIAAVLGFLVDFPMISLIAFCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSMASSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLKPLELLEGLFKECQVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDAFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNKLSEDLSKKDSGSSNSSGSSNRSHQSKNTVLRFFSSRSFKRSTSHSM---------------------MSIKNHNQFLPEM 571
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy TrEMBL
Match: A0A0B0N313_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_33371 PE=4 SV=1) HSP 1 Score: 951.814 bits (2459), Expect = 0.000e+0 Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = -1 Query: 484 MEPPKGFLATLWNFICFLPYFXXXXXXXXXXXXIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICXXXXXXXXXXXXXXXXXXXXXXXXXGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKNGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVN 2016 MEPPKGFLATLWNFICFLPYFIGLLLLGTIKGIIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKNGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVN Sbjct: 1 MEPPKGFLATLWNFICFLPYFIGLLLLGTIKGIIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKNGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVN 511
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy TrEMBL
Match: A0A0D2NLE0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G036800 PE=4 SV=1) HSP 1 Score: 915.22 bits (2364), Expect = 0.000e+0 Identity = 513/532 (96.43%), Postives = 520/532 (97.74%), Query Frame = -1 Query: 298 MTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICXXXXXXXXXXXXXXXXXXXXXXXXXGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKNGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNXXXX-XXXXXXXXXXXXXXXXXSHQSKNTVLXXXXXXXXXXXXSQNMSDQESQSVLARDAEIE 1890 MTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLA+CIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQK+GQYYEIRFL LLPALIAAVLGFLVDFPMISLIA CKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGS+ SSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDL PL+LLEGLFKEC VHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKD+FFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNKLSE KDSGSSNSS SSNRSHQSKNTVLRFFSSRSFKRS+S +MSDQESQSVLARD EIE Sbjct: 1 MTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAVCIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKDGQYYEIRFLYLLPALIAAVLGFLVDFPMISLIAFCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSMASSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLKPLELLEGLFKECQVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDAFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNKLSEDLSKKDSGSSNSSGSSNRSHQSKNTVLRFFSSRSFKRSTSHSMSDQESQSVLARDVEIE 532
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy TrEMBL
Match: A0A0D2SRL4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G036800 PE=4 SV=1) HSP 1 Score: 885.56 bits (2287), Expect = 0.000e+0 Identity = 477/488 (97.75%), Postives = 482/488 (98.77%), Query Frame = -1 Query: 553 MEPPKGFLATLWNFICFLPYFXXXXXXXXXXXXIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICXXXXXXXXXXXXXXXXXXXXXXXXXGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKNGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARR 2016 MEPPKGFLATLWNFICFLPYFIGLLLLGTIKGIIFC PICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLA+CIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQK+GQYYEIRFL LLPALIAAVLGFLVDFPMISLIA CKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGS+ SSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDL PL+LLEGLFKEC VHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKD+FFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARR Sbjct: 1 MEPPKGFLATLWNFICFLPYFIGLLLLGTIKGIIFCFPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAVCIFLPVVLILWVVVGIVGSILGGILYGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQKDGQYYEIRFLYLLPALIAAVLGFLVDFPMISLIAFCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSMASSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNARLDLKPLELLEGLFKECQVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDAFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKNIGSPPESERKRAELDALARR 488
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy TrEMBL
Match: A0A0B0MMT3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_18940 PE=4 SV=1) HSP 1 Score: 792.341 bits (2045), Expect = 0.000e+0 Identity = 445/585 (76.07%), Postives = 496/585 (84.79%), Query Frame = -1 Query: 301 MEPPKGFLATLWNFICFLPYFXXXXXXXXXXXXIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICXXXXXXXXXXXXXXXXXXXXXXXXXGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQK---NGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNE------SFSKSDSFR--PPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLK--NIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNXXXXXXXXXXXXXXXXXXXXXSHQSKNTVLXXXXXXXXXXXXSQNMSDQESQSVLARDAEI 2016 ME PKGFLATLWNFICFLPYF GLLLLGTIKGI+FC ICLI+TIGNSS+ILGLLP+H Y+T YSIV TKLLGPFLK+ IC+FLPVVLILWVVVGIVGS +GG+LYGFLSP+FATFDAVG+GKTNVF+HCFYDGT S+I GSFTVV+DF DVC HSY S ME+LRQK NG+YYEIRFL L PALI AVLGF+VDFP+ISLIALCKSPYML KGWHRLFHDL+GREGPFLETICVPFAGLAILLWPLA +GAVLGS+VSSIFLGAYA VIVYQESSFW+G+CYI+ASLSIYDEYS DVLDMPEGSC RP+YR++ E S S+SDS + PPAR+DSLTN R+DL PL+LLEGLFKEC HGEKMVSE LITSKDI++AK KGSRV+ IGLPAYC LQ LLRSV++NR GILLSDNTEITATNRPKD+FFDWFLNPFLILKEQI++ENLS EE+DYLGKLVLLCGD ARLK IGSPPES+RK+AELDA+ARRLQGITKSVSRYPTFRRHFE VN LSEDL+K S + + + L S ++ NMSDQE QS +ARD EI Sbjct: 1 MEAPKGFLATLWNFICFLPYFFGLLLLGTIKGIVFCPLICLIITIGNSSIILGLLPFHGYWTCYSIVRTKLLGPFLKVFICVFLPVVLILWVVVGIVGSSIGGLLYGFLSPIFATFDAVGKGKTNVFVHCFYDGTLSSISGSFTVVRDFYDVCFHSYVSLMEDLRQKGPPNGKYYEIRFLYLPPALITAVLGFIVDFPVISLIALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPFAGLAILLWPLATVGAVLGSMVSSIFLGAYAGVIVYQESSFWFGICYIIASLSIYDEYSNDVLDMPEGSCFARPKYRQNLKEPISNAGSLSESDSLKPHPPARMDSLTNTRIDLKPLELLEGLFKECRRHGEKMVSERLITSKDIEEAKLTKGSRVIGIGLPAYCLLQTLLRSVNSNRSGILLSDNTEITATNRPKDTFFDWFLNPFLILKEQIKSENLSEEEEDYLGKLVLLCGDPARLKISKIGSPPESDRKQAELDAIARRLQGITKSVSRYPTFRRHFENLVNILSEDLAKKSNGGTQAI------RRSKSALAMIFSNKSFDRNTSNMSDQELQSTIARDIEI 579
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy TrEMBL
Match: A0A0B0MHG2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_18940 PE=4 SV=1) HSP 1 Score: 786.563 bits (2030), Expect = 0.000e+0 Identity = 440/590 (74.58%), Postives = 493/590 (83.56%), Query Frame = -1 Query: 301 MEPPKGFLATLWNFICFLPYFXXXXXXXXX-----XXXIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICXXXXXXXXXXXXXXXXXXXXXXXXXGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQK---NGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNE------SFSKSDSFR--PPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLK--NIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNXXXXXXXXXXXXXXXXXXXXXSHQSKNTVLXXXXXXXXXXXXSQNMSDQESQSVLARDAEI 2016 ME PKGFLATLWNFICFLPYF GLLL+ + GI+FC ICLI+TIGNSS+ILGLLP+H Y+T YSIV TKLLGPFLK+ IC+FLPVVLILWVVVGIVGS +GG+LYGFLSP+FATFDAVG+GKTNVF+HCFYDGT S+I GSFTVV+DF DVC HSY S ME+LRQK NG+YYEIRFL L PALI AVLGF+VDFP+ISLIALCKSPYML KGWHRLFHDL+GREGPFLETICVPFAGLAILLWPLA +GAVLGS+VSSIFLGAYA VIVYQESSFW+G+CYI+ASLSIYDEYS DVLDMPEGSC RP+YR++ E S S+SDS + PPAR+DSLTN R+DL PL+LLEGLFKEC HGEKMVSE LITSKDI++AK KGSRV+ IGLPAYC LQ LLRSV++NR GILLSDNTEITATNRPKD+FFDWFLNPFLILKEQI++ENLS EE+DYLGKLVLLCGD ARLK IGSPPES+RK+AELDA+ARRLQGITKSVSRYPTFRRHFE VN LSEDL+K S + + + L S ++ NMSDQE QS +ARD EI Sbjct: 1 MEAPKGFLATLWNFICFLPYFFGLLLIEILHCIIHSGIVFCPLICLIITIGNSSIILGLLPFHGYWTCYSIVRTKLLGPFLKVFICVFLPVVLILWVVVGIVGSSIGGLLYGFLSPIFATFDAVGKGKTNVFVHCFYDGTLSSISGSFTVVRDFYDVCFHSYVSLMEDLRQKGPPNGKYYEIRFLYLPPALITAVLGFIVDFPVISLIALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPFAGLAILLWPLATVGAVLGSMVSSIFLGAYAGVIVYQESSFWFGICYIIASLSIYDEYSNDVLDMPEGSCFARPKYRQNLKEPISNAGSLSESDSLKPHPPARMDSLTNTRIDLKPLELLEGLFKECRRHGEKMVSERLITSKDIEEAKLTKGSRVIGIGLPAYCLLQTLLRSVNSNRSGILLSDNTEITATNRPKDTFFDWFLNPFLILKEQIKSENLSEEEEDYLGKLVLLCGDPARLKISKIGSPPESDRKQAELDAIARRLQGITKSVSRYPTFRRHFENLVNILSEDLAKKSNGGTQAI------RRSKSALAMIFSNKSFDRNTSNMSDQELQSTIARDIEI 584
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy TrEMBL
Match: A0A0D2VXC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G091500 PE=4 SV=1) HSP 1 Score: 785.023 bits (2026), Expect = 0.000e+0 Identity = 445/585 (76.07%), Postives = 491/585 (83.93%), Query Frame = -1 Query: 301 MEPPKGFLATLWNFICFLPYFXXXXXXXXXXXXIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICXXXXXXXXXXXXXXXXXXXXXXXXXGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQK---NGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNE------SFSKSDSFR--PPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLK--NIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNXXXXXXXXXXXXXXXXXXXXXSHQSKNTVLXXXXXXXXXXXXSQNMSDQESQSVLARDAEI 2016 ME PKGFLATLWNFICFLPYF GLLLLGTIKGI+FC ICLI+TI NSS+ILGLLP+H Y+T YSIV TKLLGPFLKL IC+FLPVVLILWVVVGIVGS +GG+LYGFLSP+FATFDAVG+GKTNVF+HCFYDGT STI GSFTVV+DF DVC HSY S ME+LRQK NG+YYEIRFL L PALIAAVLGF+VDFP+ISLIALCKSPYML KGW RLFHDL+GREGPFLETICVPFAGLAILLWPLA +GAVLGS+VSSIFLGAYA VIVYQESSFW+GLCY++ASLSIYDEYS DVLDMPEGSC RP+YR++ E S S+SDS + PPAR+DSLTN R+DL PL+LLEGLFKEC HGEKMVSE LITSKDI++AK KGSRV+ IGLPAYC LQ LLRSV+ NR GILLSDNTEITATNRPKD+FFDWFLNPFLILKEQI++ENLS EE+DYLGKLVLLCGD RLK IGSPPES+RKRAELDA+ARRLQGITKSVSRYPTFRR FE VN LSEDL+K S + + L S ++ NMSDQE QS +ARD EI Sbjct: 1 MEAPKGFLATLWNFICFLPYFFGLLLLGTIKGIVFCPLICLIITIVNSSIILGLLPFHGYWTCYSIVRTKLLGPFLKLFICVFLPVVLILWVVVGIVGSSIGGVLYGFLSPIFATFDAVGKGKTNVFVHCFYDGTLSTISGSFTVVRDFYDVCFHSYVSLMEDLRQKGPPNGKYYEIRFLYLPPALIAAVLGFIVDFPVISLIALCKSPYMLYKGWRRLFHDLIGREGPFLETICVPFAGLAILLWPLATVGAVLGSMVSSIFLGAYAGVIVYQESSFWFGLCYVIASLSIYDEYSNDVLDMPEGSCFARPKYRQNLKEPISNAGSLSESDSLKPHPPARMDSLTNTRIDLKPLELLEGLFKECRRHGEKMVSERLITSKDIEEAKLTKGSRVIGIGLPAYCLLQTLLRSVNNNRSGILLSDNTEITATNRPKDTFFDWFLNPFLILKEQIKSENLSEEEEDYLGKLVLLCGDPERLKISKIGSPPESDRKRAELDAIARRLQGITKSVSRYPTFRRLFENLVNILSEDLAKKSNGGTQPI------RRSKSALAMIFSNKSFNRNTSNMSDQELQSTIARDIEI 579
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy TrEMBL
Match: A0A061EJZ3_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_017046 PE=4 SV=1) HSP 1 Score: 774.237 bits (1998), Expect = 0.000e+0 Identity = 454/586 (77.47%), Postives = 509/586 (86.86%), Query Frame = -1 Query: 301 MEPPKGFLATLWNFICFLPYFXXXXXXXXXXXXIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICXXXXXXXXXXXXXXXXXXXXXXXXXGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQK---NGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNE------SFSKSDSFR--PPARIDSLTNARLDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDNTEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLK--NIGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNXXXXXXXXXXXXXXXXXXXXX-SHQSKNTVLXXXXXXXXXXXXSQNMSDQESQSVLARDAEI 2016 MEPPKGFLATLWNFICFLPYFIGLL LGTIKGIIFC+PICLIMT+GNSS+ILGLL +H Y+T YS+V KLLGP LKL IC+ LPV+LILWVVV IVGSI+GGILYGFLSP+FATFDAVGEGKTNVF HCFYDGTWSTIKGSFT V+DF DVC HS+ S+MEEL+QK NG+YYEIRFL L ALIAAVLGF+VD P+ISLIAL KSPYML KGW+RLFHDL+GREGPFLETICVPFAGLAILLWPLAV+GAVLGS+VSSIFLGAYA V+VYQ SSFW+GLCYIVAS+SIYDEYS DVLDMPEGSC PRP+YRR++ E SF+ SDSF+ PPAR +SLTN R+DL PL+LLEGLFKEC HGEKMVSEGLIT KDI+DAKS KGS VVSIGLPAYC LQALLRSV+AN+ GILLSDNTEITATNRPKD+FFDWFLNPFLILKEQI+AENLS EE+DYLGKLVLL GD RLK NIGSPPESERKRAELDALARRL+GITKSVSRYPT+ RHF VN LSEDL+K + S+ + + ++K+ + R FS++SFK+++S NMS QES SV+ARD EI Sbjct: 1 MEPPKGFLATLWNFICFLPYFIGLLFLGTIKGIIFCAPICLIMTVGNSSIILGLLLFHFYWTCYSVVRAKLLGPVLKLLICVCLPVLLILWVVVAIVGSIIGGILYGFLSPIFATFDAVGEGKTNVFFHCFYDGTWSTIKGSFTFVRDFNDVCFHSFTSYMEELQQKEPPNGKYYEIRFLYLPLALIAAVLGFMVDLPVISLIALWKSPYMLFKGWNRLFHDLIGREGPFLETICVPFAGLAILLWPLAVVGAVLGSMVSSIFLGAYAGVVVYQGSSFWFGLCYIVASVSIYDEYSNDVLDMPEGSCFPRPQYRRNKKESTRSASSFTNSDSFKPHPPARANSLTNTRIDLKPLELLEGLFKECSRHGEKMVSEGLITPKDIEDAKSSKGSSVVSIGLPAYCLLQALLRSVNANKSGILLSDNTEITATNRPKDTFFDWFLNPFLILKEQIKAENLSLEEEDYLGKLVLLSGDPERLKISNIGSPPESERKRAELDALARRLRGITKSVSRYPTYWRHFANLVNTLSEDLAKKNHDSSRLSNGAQPIRRTKSALARIFSNKSFKQNASYNMSIQESGSVIARDIEI 586
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy Swiss-Prot
Match: Y3739_ARATH (Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana GN=At3g27390 PE=1 SV=2) HSP 1 Score: 630.558 bits (1625), Expect = 0.000e+0 Identity = 371/590 (62.88%), Postives = 447/590 (75.76%), Query Frame = -1 Query: 301 MEPPKGFLATLWNFICFLPYFXXXXXXXXXXXXIFCSPICLIMTIGNSSVILGLLPYHCYFTYYSIVSTKLLGPFLKLAICXXXXXXXXXXXXXXXXXXXXXXXXXGFLSPMFATFDAVGEGKTNVFIHCFYDGTWSTIKGSFTVVKDFKDVCVHSYYSFMEELRQK--NGQYYEIRFLCLLPALIAAVLGFLVDFPMISLIALCKSPYMLVKGWHRLFHDLVGREGPFLETICVPFAGLAILLWPLAVIGAVLGSIVSSIFLGAYAAVIVYQESSFWYGLCYIVASLSIYDEYSTDVLDMPEGSCLPRPRYRRHRNESFSKSDSFRPPARIDSLTNAR-----------LDLNPLQLLEGLFKECHVHGEKMVSEGLITSKDIDDAKSIKGSRVVSIGLPAYCFLQALLRSVDANRLGILLSDN-TEITATNRPKDSFFDWFLNPFLILKEQIRAENLSPEEKDYLGKLVLLCGDAARLKN----IGSPPESERKRAELDALARRLQGITKSVSRYPTFRRHFEEFVNXXXXXXXXXXXXXXXXXXXXXSHQSKNTVLXXXXXXXXXXXXSQNMSDQESQSVLARDAEI 2016 MEPP GF A+L+ F+ FLPYFIGLL LG IKGI+ C +CL++TIGNS+VIL LLP H +T+YSIVS K +GP LK+ +C+ LP +ILW +VGI+GS+LGG LYGF SP+FATFDAVGEGK F HCFYDGTWST++ SFTVV+DFKDVC HSY+S M+EL+Q + +YYEIR L L AL+ +VLG LVD P+ISL+A+CKSPYML KGWHRLFHDL+GREGPFLET+CVP AGLAILLWPLAV GAV+GS++SSIFLGAYA V+ YQESSF+YGLCYIVAS+SIYDEYSTD+LD+PEGSC PRP+YRR E S P R+ S+ NA +D+ PL LL LF EC +GE + ++GLI SKDI++A+S KGS+V+S+GLPAY L +LRSV AN G+LLSD TEIT NRPKD FFDWFLNPFLILKEQ++A NLS EE++YLG+LVLL GD RLK+ SPP +ERKRAELDA ARR+QG+TK+VSRYPTFRRHF V KLSEDL +S S + R FS RSF+R S N SDQESQ ++R+ +I Sbjct: 1 MEPPIGFRASLFQFLLFLPYFIGLLFLGFIKGIVLCPLVCLVVTIGNSAVILSLLPVHIVWTFYSIVSAKQVGPILKIFLCLCLPAAIILWPIVGILGSVLGGALYGFFSPIFATFDAVGEGKPYQFFHCFYDGTWSTMQRSFTVVRDFKDVCFHSYFSLMDELKQSCPDRKYYEIRLLQLPGALVVSVLGILVDPPVISLVAICKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAGLAILLWPLAVTGAVIGSVISSIFLGAYAGVVSYQESSFYYGLCYIVASVSIYDEYSTDILDLPEGSCFPRPKYRRKDEEPTPFSG---PVPRLGSVKNASSMRGGSVRVPMIDIKPLDLLNELFVECRRYGEVLATKGLINSKDIEEARSSKGSQVISVGLPAYGLLYEILRSVKANSSGLLLSDGVTEITTMNRPKDVFFDWFLNPFLILKEQMKATNLSEEEEEYLGRLVLLFGDPERLKSSNAISASPPLTERKRAELDAFARRMQGLTKTVSRYPTFRRHFVALVKKLSEDLDLKDNNSAKDESITEPPAPVKIISRIFSQRSFRRKGSVNGSDQESQKGVSRNVDI 587 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0017420 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0017420 ID=g.arboreum_cottongen_reftransV1_0017420; Name=g.arboreum_cottongen_reftransV1_0017420; organism=Gossypium arboreum; type=contig; length=2193bpback to top |