g.arboreum_cottongen_reftransV1_0001675, g.arboreum_cottongen_reftransV1_0001675 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A0D2NES5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G267600 PE=4 SV=1) HSP 1 Score: 1035.02 bits (2675), Expect = 0.000e+0 Identity = 534/544 (98.16%), Postives = 541/544 (99.45%), Query Frame = -3 Query: 203 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGR+MSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKTLAARKAAALLEQANAAAATNATESEAQNPNP+MAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVK NQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTS+MKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASK+CPTPLRTPNQVSISGK KQSSATPWSENQSARTPVNSSASVSKTARGKWNFL TDCSKIL+ACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLK+KAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKN+CFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH Sbjct: 1 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRFMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKTLAARKAAALLEQANAAAATNATESEAQNPNPQMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKVNQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSRMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKDCPTPLRTPNQVSISGKLKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLHTDCSKILTACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKDKAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNSCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 544
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A0D2M3M6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G267600 PE=4 SV=1) HSP 1 Score: 1030.39 bits (2663), Expect = 0.000e+0 Identity = 534/545 (97.98%), Postives = 541/545 (99.27%), Query Frame = -3 Query: 203 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQ-RLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGR+MSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKTLAARKAAALLEQANAAAATNATESEAQNPNP+MAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVK NQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTS+MKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASK+CPTPLRTPNQVSISGK KQSSATPWSENQSARTPVNSSASVSKTARGKWNFL TDCSKIL+ACRNKSQSPGIFASFNLRTEERAARRKQ RLEEKFNVIQEQKVQQQTTLK+KAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKN+CFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH Sbjct: 1 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRFMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKTLAARKAAALLEQANAAAATNATESEAQNPNPQMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKVNQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSRMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKDCPTPLRTPNQVSISGKLKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLHTDCSKILTACRNKSQSPGIFASFNLRTEERAARRKQARLEEKFNVIQEQKVQQQTTLKDKAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNSCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 545
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A0D2Q4S3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G267600 PE=4 SV=1) HSP 1 Score: 1010.75 bits (2612), Expect = 0.000e+0 Identity = 525/544 (96.51%), Postives = 532/544 (97.79%), Query Frame = -3 Query: 203 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGR+MSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKTLAARKAAALLEQANAAAATNATESEAQNPNP+MAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVK NQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTS+MKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASK+CPTPLRTPNQVSISGK KQSSATPWSENQSARTPVNSSASVSKTARGKWNFL T+ NKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLK+KAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKN+CFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH Sbjct: 1 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRFMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKTLAARKAAALLEQANAAAATNATESEAQNPNPQMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKVNQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSRMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKDCPTPLRTPNQVSISGKLKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLHTE---------NKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKDKAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNSCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 535
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A0B0PHB5_GOSAR (Translation initiation factor IF-2 OS=Gossypium arboreum GN=F383_09470 PE=4 SV=1) HSP 1 Score: 1002.28 bits (2590), Expect = 0.000e+0 Identity = 523/545 (95.96%), Postives = 523/545 (95.96%), Query Frame = -3 Query: 200 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQHA 1834 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKTLAARKAAALLEQANAAAATNATESEAQNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSP EKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQHA Sbjct: 1 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKTLAARKAAALLEQANAAAATNATESEAQNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSP----------------------EKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQHA 523
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A061EDE2_THECC (TPX2 family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_017060 PE=4 SV=1) HSP 1 Score: 750.355 bits (1936), Expect = 0.000e+0 Identity = 413/585 (70.60%), Postives = 451/585 (77.09%), Query Frame = -3 Query: 203 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSE----------------------------------FVKVQSS------SVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKE-RTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834 MG+S CLMQPFSYTAG+PNEAKEGNP+HGLGQSISFGR+MSESLAWEKWSTFSHNKYVEEAERY+RPGSVAQKKAFFEAHYK+LAARKAAALLEQANAAA + G ++D SE FVK +S SV E VLLEN MKNE+ E+ VDK I D+E++ETTQV+ CVK +Q R L + E ELSEGTQMEKPLLK T++DEFEVTSK KP+ SSSKV A ARTSK+PSSPAKF AP RPN GNNLTPM KKSAMDIS+RKRSTPK SHKSINFT A EFSK TSTII+KIDGSRI SNSKASKEC TPLRTPN S SG+PKQ SATPWSEN+SARTP NSSASVSKTARGKWNFLPTDCSK LSACRNKSQSPGIFASF+LRTEERAARRKQRLEEKFNV QEQKVQQQTTLKEKA E KKLRQSFCFKARPLPDFYKE RTPKDQ+QKVPLT+PESP +GRKSTP KA +SK+S+ PH+KS IKN CF V EKKN+ S RSL +R+ AH NT+PNIQH Sbjct: 1 MGESACLMQPFSYTAGIPNEAKEGNPVHGLGQSISFGRFMSESLAWEKWSTFSHNKYVEEAERYSRPGSVAQKKAFFEAHYKSLAARKAAALLEQANAAANSAKESEVE----------GGVHDITTQGSEMTNSNSQIPVLDQEVKAPSTKAGSIHDGKENNSDFVKFESGKVEGDDSVAEHHVLLENCMKNESIERKA-SVDKVVIRDVELRETTQVE-KCVKVDQPRQLREIIESELSEGTQMEKPLLKSFNTSQDEFEVTSKKKPTHSSSKVSAYARTSKVPSSPAKFTAPTRPNKGNNLTPMAKKSAMDISDRKRSTPKPSHKSINFTPATEFSKITSTIIQKIDGSRIASNSKASKECATPLRTPNTASTSGRPKQPSATPWSENRSARTPFNSSASVSKTARGKWNFLPTDCSKFLSACRNKSQSPGIFASFSLRTEERAARRKQRLEEKFNVSQEQKVQQQTTLKEKAEAELKKLRQSFCFKARPLPDFYKERRTPKDQMQKVPLTQPESPALGRKSTPSKAGTAQSKNSL-PHQKSLIKNTCFKQVPEKKNQVSVRSLTTRVPAPAHGNTTPNIQH 572
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A061EK20_THECC (TPX2 family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_017060 PE=4 SV=1) HSP 1 Score: 723.776 bits (1867), Expect = 0.000e+0 Identity = 404/585 (69.06%), Postives = 443/585 (75.73%), Query Frame = -3 Query: 203 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSE----------------------------------FVKVQSS------SVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKE-RTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834 MG+S CLMQPFSYTAG+PNEAKEGNP+HGLGQSISFGR+MSESLAWEKWSTFSHNKYVEEAERY+RPGSVAQKKAFFEAHYK+LAARKAAALLEQANAAA + G ++D SE FVK +S SV E VLLEN MKNE+ E+ VDK I D+E++ETTQV+ CVK +Q R L + E ELSEGTQMEKPLLK T++DEFEVTSK KP+ SSSKV A ARTSK+PSSPAKF AP RPN GNNLTPM KKSAMDIS+RKRSTPK SHKSINFT A EFSK TSTII+KIDGSRI SNSKASKEC TPLRTPN S SG+PKQ SATPWSEN+SARTP NSSASVSKTARGKWNFLPT+ NKSQSPGIFASF+LRTEERAARRKQRLEEKFNV QEQKVQQQTTLKEKA E KKLRQSFCFKARPLPDFYKE RTPKDQ+QKVPLT+PESP +GRKSTP KA +SK+S+ PH+KS IKN CF V EKKN+ S RSL +R+ AH NT+PNIQH Sbjct: 1 MGESACLMQPFSYTAGIPNEAKEGNPVHGLGQSISFGRFMSESLAWEKWSTFSHNKYVEEAERYSRPGSVAQKKAFFEAHYKSLAARKAAALLEQANAAANSAKESEVE----------GGVHDITTQGSEMTNSNSQIPVLDQEVKAPSTKAGSIHDGKENNSDFVKFESGKVEGDDSVAEHHVLLENCMKNESIERKA-SVDKVVIRDVELRETTQVE-KCVKVDQPRQLREIIESELSEGTQMEKPLLKSFNTSQDEFEVTSKKKPTHSSSKVSAYARTSKVPSSPAKFTAPTRPNKGNNLTPMAKKSAMDISDRKRSTPKPSHKSINFTPATEFSKITSTIIQKIDGSRIASNSKASKECATPLRTPNTASTSGRPKQPSATPWSENRSARTPFNSSASVSKTARGKWNFLPTE---------NKSQSPGIFASFSLRTEERAARRKQRLEEKFNVSQEQKVQQQTTLKEKAEAELKKLRQSFCFKARPLPDFYKERRTPKDQMQKVPLTQPESPALGRKSTPSKAGTAQSKNSL-PHQKSLIKNTCFKQVPEKKNQVSVRSLTTRVPAPAHGNTTPNIQH 563
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A061ECE1_THECC (TPX2 family protein, putative isoform 3 OS=Theobroma cacao GN=TCM_017060 PE=4 SV=1) HSP 1 Score: 687.567 bits (1773), Expect = 0.000e+0 Identity = 389/585 (66.50%), Postives = 427/585 (72.99%), Query Frame = -3 Query: 203 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSE----------------------------------FVKVQSS------SVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKE-RTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834 MG+S CLMQPFSYTAG+PNEAKEGNP+HGLGQSISFGR+MSESLAWEKWSTFSHNKYVEEAERY+RPGSVAQKKAFFEAHYK+LAARKAAALLEQANAAA + G ++D SE FVK +S SV E VLLEN MKNE+ E+ VDK I D+E++ETTQV+ CVK +Q R L + E ELSEGTQMEKPLLK T++DEFEVTSK KP+ SSSKV A ARTSK+PSSPAKF AP RPN GNNLTPM KKSAMDIS+RKRSTPK SHKSINFT A EFSK TSTII+KIDGSRI SNSKASKEC TPLRTPN S SG+PKQ SATPWSEN+S CSK LSACRNKSQSPGIFASF+LRTEERAARRKQRLEEKFNV QEQKVQQQTTLKEKA E KKLRQSFCFKARPLPDFYKE RTPKDQ+QKVPLT+PESP +GRKSTP KA +SK+S+ PH+KS IKN CF V EKKN+ S RSL +R+ AH NT+PNIQH Sbjct: 1 MGESACLMQPFSYTAGIPNEAKEGNPVHGLGQSISFGRFMSESLAWEKWSTFSHNKYVEEAERYSRPGSVAQKKAFFEAHYKSLAARKAAALLEQANAAANSAKESEVE----------GGVHDITTQGSEMTNSNSQIPVLDQEVKAPSTKAGSIHDGKENNSDFVKFESGKVEGDDSVAEHHVLLENCMKNESIERKA-SVDKVVIRDVELRETTQVE-KCVKVDQPRQLREIIESELSEGTQMEKPLLKSFNTSQDEFEVTSKKKPTHSSSKVSAYARTSKVPSSPAKFTAPTRPNKGNNLTPMAKKSAMDISDRKRSTPKPSHKSINFTPATEFSKITSTIIQKIDGSRIASNSKASKECATPLRTPNTASTSGRPKQPSATPWSENRS-------------------------CSKFLSACRNKSQSPGIFASFSLRTEERAARRKQRLEEKFNVSQEQKVQQQTTLKEKAEAELKKLRQSFCFKARPLPDFYKERRTPKDQMQKVPLTQPESPALGRKSTPSKAGTAQSKNSL-PHQKSLIKNTCFKQVPEKKNQVSVRSLTTRVPAPAHGNTTPNIQH 547
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A061ECK3_THECC (TPX2 family protein, putative isoform 4 OS=Theobroma cacao GN=TCM_017060 PE=4 SV=1) HSP 1 Score: 524.628 bits (1350), Expect = 8.310e-178 Identity = 285/417 (68.35%), Postives = 314/417 (75.30%), Query Frame = -3 Query: 674 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHY-------------KXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRM-----------AETGSIYDCKENNSEFVKVQSS------SVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACR 1834 MG+S CLMQPFSYTAG+PNEAKEGNP+HGLGQSISFGR+MSESLAWEKWSTFSHNKYVEEAERY+RPGSVAQKKAFFEAHY + AA +A E SE N N ++ + GSI+D KENNS+FVK +S SV E VLLEN MKNE+ E+ V DK I D+E++ETTQV+ CVK +Q R L + E ELSEGTQMEKPLLK T++DEFEVTSK KP+ SSSKV A ARTSK+PSSPAKF AP RPN GNNLTPM KKSAMDIS+RKRSTPK SHKSINFT A EFSK TSTII+KIDGSRI SNSKASKEC TPLRTPN S SG+PKQ SATPWSEN+SARTP NSSASVSKTARGKWNFLPTDCSK LSACR Sbjct: 1 MGESACLMQPFSYTAGIPNEAKEGNPVHGLGQSISFGRFMSESLAWEKWSTFSHNKYVEEAERYSRPGSVAQKKAFFEAHYKSLAARKAAALLEQANAAANSAKESEVEGGVHDITTQGSEMTNSNSQIPVLDQEVKAPSTKAGSIHDGKENNSDFVKFESGKVEGDDSVAEHHVLLENCMKNESIERKASV-DKVVIRDVELRETTQVEK-CVKVDQPRQLREIIESELSEGTQMEKPLLKSFNTSQDEFEVTSKKKPTHSSSKVSAYARTSKVPSSPAKFTAPTRPNKGNNLTPMAKKSAMDISDRKRSTPKPSHKSINFTPATEFSKITSTIIQKIDGSRIASNSKASKECATPLRTPNTASTSGRPKQPSATPWSENRSARTPFNSSASVSKTARGKWNFLPTDCSKFLSACR 415
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: B9GJA8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s36260g PE=4 SV=1) HSP 1 Score: 486.108 bits (1250), Expect = 2.769e-161 Identity = 296/566 (52.30%), Postives = 376/566 (66.43%), Query Frame = -3 Query: 203 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEIT---DLEVKETTQVKN------------NCVK-ANQSRLLGDD-----KELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERT-PKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834 MGD+TC+MQPFSY AG+ N+AKEGNPIH LGQSISFGR+MS+SL+WEKWS+FSHN+YVEEAE+++RPGSVAQKKAFFEAHY+ LAARKAAALLEQANA A G I+D +S V S + + + + EA V D T D+E E++ V+ NCVK ++++ D KE+ELS QMEKPLLK + +D+ SK KP+ SSSK + SK+PS+PAK +R N TP++KKSA++ ER++ TPKS+HKS+NFT A+EF++ TS+IIRKID SR+ S+SK+SK+CPTP RTP + + K ATP SE + A+TP++ S S SKT R KW+FLP DCS +++ RN+SQSP F+ RTEERAARRK++LEEKFN Q QKVQ Q TLKEKA TE K+LRQS CFKARPLPDFYK+R P +Q++KVPLT ESP GRK TP K + S S +P + SS+KN+ +KK+ + RSLASR+ S HENTSPNIQH Sbjct: 1 MGDTTCVMQPFSYAAGISNDAKEGNPIHALGQSISFGRFMSDSLSWEKWSSFSHNRYVEEAEKFSRPGSVAQKKAFFEAHYRNLAARKAAALLEQANAEANNVQEPENE----------GGIHDKTTQDSLTVATNSQEAGDREEVHVQQVNCEA----SFVADDNTRTSNVDMERFESSNVEEVEPSAENEILVENCVKNETLNQIVKVDNKEEVKEMELSVSKQMEKPLLKDFMSCKDDAASMSKKKPAVSSSKSSIYDKASKLPSTPAKPAPSVRAKKENTATPISKKSALESVERRKPTPKSTHKSMNFTPAREFNRITSSIIRKIDNSRVGSHSKSSKDCPTPSRTPMMMVSIAESKHPLATPQSEKRRAKTPLHPSTSGSKTVRSKWHFLPKDCSMFMTSSRNRSQSPSASIPFSFRTEERAARRKEKLEEKFNAYQAQKVQLQVTLKEKAETELKRLRQSLCFKARPLPDFYKQRVAPNNQMEKVPLTHSESPEPGRKMTPSK---IRSASQLP--QWSSLKNSGSKDAMQKKS-DNPRSLASRLKASPHENTSPNIQH 546
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A067EDV5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009164mg PE=4 SV=1) HSP 1 Score: 471.47 bits (1212), Expect = 9.687e-156 Identity = 297/553 (53.71%), Postives = 361/553 (65.28%), Query Frame = -3 Query: 203 MGDSTCLMQ-----PFSYTAGLPNEAKE-GNPIHGLGQSISFGRYMSESLAWEKWSTFS-HNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRI-DSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERT-PKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834 MG+STCLMQ PFSY +G PNEAKE GNPIH LGQS+SFGR+MSESLAWEKWS+FS HNKYVEEAERY+RPGSVAQKKAFFEAHYK LAARK AA L + A+ N E+Q G + + +S+ + V+ + +L+ + N + V +K E + E ++T V + R D K LS QM+KP LK +N+D+ SK KPS SSSK R +K PS+PAK APL+ N TP+ KKSA+D ++ KRSTPKS HKSI T A+E ++ TSTI+RKIDGS++ SNSKASK+C TPL TP S++G PK ATPWSEN+ TP +S+ SKT R +WNFLPTDCSK LSACRNK QSP F F LRTEERAARRK++LEEKFN Q QK+Q+Q TLKEKA TE +KLRQ+ CFKARPLP FYKER PK Q+ K P T+P+SP + AS ++K S P R + K+ HV EKK+ S RSLASR HEN SPNIQH Sbjct: 1 MGESTCLMQMQVQQPFSYVSGFPNEAKEEGNPIHALGQSVSFGRFMSESLAWEKWSSFSSHNKYVEEAERYSRPGSVAQKKAFFEAHYKELAARKKAAALLEQAQDASNNNLAGESQP-------EGEVENVTAQDSQTIAVEEQ--EAATILVHESESNSVLGQRSVDGEK-ETENCEKTKSTNQLERVVVVDSKREAKDSK---LSGANQMQKPRLKSSNSNQDDRASMSKKKPSFSSSKSLNFGRATKTPSTPAKPTAPLQSTKEINATPIKKKSAIDFADNKRSTPKSIHKSIYLTPAREINRLTSTIVRKIDGSKVMGSNSKASKDCSTPLMTPTAASVNGAPKHPLATPWSENRRDGTPHDSNMG-SKTVRARWNFLPTDCSKFLSACRNKLQSPNSFTPFRLRTEERAARRKEKLEEKFNANQIQKLQKQVTLKEKAETEIRKLRQTLCFKARPLPHFYKERAIPKSQMNKDPPTRPQSPKLT-------ASTFQTKPSTPRQRPPT-KHIGSDHVLEKKSHASTRSLASRPTKITHENKSPNIQH 531
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy Swiss-Prot
Match: WVD2_ARATH (Protein WAVE-DAMPENED 2 OS=Arabidopsis thaliana GN=WVD2 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 8.080e-11 Identity = 44/124 (35.48%), Postives = 72/124 (58.06%), Query Frame = -3 Query: 353 DCSKILSACRNKSQSPGIFASFNLRTEERAARRK---QRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTP-KDQIQKVPLTKPESPGIG---RKSTPCKASIVES 703 DCS + S+ +N + R+ +RA +RK Q+LEEK ++ ++++ + KE+ K+LR++ FKA P+PDFY +R P K +++K PLT+P+SP + RKS C +I S Sbjct: 67 DCS-VASSMKNAKSKVTHGTAPRFRSAQRAEKRKEYYQKLEEKHQALEAERIELEQRQKEEQEAAIKQLRKNLKFKANPVPDFYYQRPPVKPELKKFPLTRPKSPKLNLSRRKS--CSDAITSS 187
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy Swiss-Prot
Match: WDL1_ARATH (Protein WVD2-like 1 OS=Arabidopsis thaliana GN=WDL1 PE=1 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 6.700e-8 Identity = 31/84 (36.90%), Postives = 56/84 (66.67%), Query Frame = -3 Query: 395 LRTEERAARRK---QRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTP-KDQIQKVPLTKPESPGI 634 R+ +RA +RK Q+LEEK ++ ++ + + K++ K+LR++ FKA+P+P+FY E P K +++K+PLT+P+SP + Sbjct: 128 FRSAQRAEKRKEYYQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKAKPVPNFYYEAPPAKPELKKLPLTRPKSPKL 211 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0001675 ID=g.arboreum_cottongen_reftransV1_0001675; Name=g.arboreum_cottongen_reftransV1_0001675; organism=Gossypium arboreum; type=contig; length=1896bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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