augustus_masked-Dt_05_GB713-gene-65.296

Gene Overview
Nameaugustus_masked-Dt_05_GB713-gene-65.296
Unique Nameaugustus_masked-Dt_05_GB713-gene-65.296_NSF_v1
Typegene
OrganismGossypium hirsutum (Upland Cotton)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Dt_05_GB713chromosomeDt_05_GB713:65685466..65686485 -Gossypium hirsutum (AD1) 'B713' genome NSF_v1n/a
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
Gossypium hirsutum (AD1) 'B713' genome NSF_v12022-01-11
Relationships

The following CDS feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
augustus_masked-Dt_05_GB713-gene-65.296-mRNA-1:cdsaugustus_masked-Dt_05_GB713-gene-65.296-mRNA-1:cdsGossypium hirsutumCDS


The following exon feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
augustus_masked-Dt_05_GB713-gene-65.296-mRNA-1:exon:2422augustus_masked-Dt_05_GB713-gene-65.296-mRNA-1:exon:2422Gossypium hirsutumexon


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
augustus_masked-Dt_05_GB713-gene-65.296-mRNA-1augustus_masked-Dt_05_GB713-gene-65.296_NSF_v1Gossypium hirsutummRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
augustus_masked-Dt_05_GB713-gene-65.296augustus_masked-Dt_05_GB713-gene-65.296_NSF_v1-proteinGossypium hirsutumpolypeptide


Sequences
The following sequences are available for this feature:

gene from alignment at Dt_05_GB713:65685466..65686485-

Legend: polypeptideCDSexonmRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>augustus_masked-Dt_05_GB713-gene-65.296_NSF_v1 ID=augustus_masked-Dt_05_GB713-gene-65.296_NSF_v1; Name=augustus_masked-Dt_05_GB713-gene-65.296; organism=Gossypium hirsutum; type=gene; length=1020bp; location=Sequence derived from: Dt_05_GB713:65685466..65686485- (Gossypium hirsutum
ATGGAGAACGAACTTCACAATTTCATCAAGGTATGGATTTTAGCTATCAT
TTCCCTTTGTTATTGTTTCTACATACCATCAAAGCTCCCCAAAGGCATTT
TCAAGCTTATTTCTTTAACCCCAATCTTCATCTTCTTCCTTTACCTCCCT
CTCACCATCTCCACCGCCCATCTCGTCGGCATCACCGCCTTCTTCCTCTC
TTGGTTAGCTAATTTCAAGCTCCTCCTCTTTTGTTTCGACCAACCACCGC
TCTCACCACCGCCGTCCAACCTTTTTCATTTCATTTCCTTAGCTTCTCTT
CCCATTAAACCAAAACAAAAAACCCCATCTCAAAACAGATCTAAACCACC
CCAAAGATCAATCTTGTTTGCTATAAAAGTTCTAATATTAGCTTTGCTTT
ATCATTGTTATAGCTACAAACAAATTCTCAATAAAAATGTAGTTCTAGCA
ATGTACTGTGTCCACATCTACATTGAGCTTGAGCTCATCCTAGCCTTGGC
CGCAACCCTTGCTCGAGCCATGTTTGGGTTCGAGTTCGAGCCACAGTTCA
ATGAACCCTACTTGGCTACCTCTTTACAAGATTTTTGGGGTCGTAGATGG
AACCTTATGGTTACTAGTATTCTACGACCAACCGTATATTACCCCATACG
CCGTATTTCTACTCGTTTGCTCGGATCAAGGTGGGCTTCGTTGCCGGCGA
TCGTCGTTGTGTTCGTCGTCTCCGGCTTGATGCATGAATTGATTTTTTAT
TACATGACTCGTGTGGCTCCTAGTTGGGAGGTGACATGGTTTTTCATCTT
ACATGGGGTTGCGGTGGCGGCGGAAGTGGTGGTGAAGAAGGTGGTGCCTG
AGAAAATGAGGTTGCACCCGGTGGTTTCCGGGGCGTCAGCTTTGGGATTT
GTGGCGGTGACTGCCGTTTGGTTGTTTCTCCCGCAGTTAGTGAGGAATGG
TGTAGATGAGAAGAACATTGGAGAGTACTCCAAGGTGATGGATCTTATAA
AGGGTTTGCTTCCATTTTGA
back to top

Coding sequence (CDS) from alignment at Dt_05_GB713:65685466..65686485-

>augustus_masked-Dt_05_GB713-gene-65.296_NSF_v1 ID=augustus_masked-Dt_05_GB713-gene-65.296_NSF_v1; Name=augustus_masked-Dt_05_GB713-gene-65.296; organism=Gossypium hirsutum; type=CDS; length=1020bp; location=Sequence derived from: Dt_05_GB713:65685466..65686485- (Gossypium hirsutum
ATGGAGAACGAACTTCACAATTTCATCAAGGTATGGATTTTAGCTATCAT
TTCCCTTTGTTATTGTTTCTACATACCATCAAAGCTCCCCAAAGGCATTT
TCAAGCTTATTTCTTTAACCCCAATCTTCATCTTCTTCCTTTACCTCCCT
CTCACCATCTCCACCGCCCATCTCGTCGGCATCACCGCCTTCTTCCTCTC
TTGGTTAGCTAATTTCAAGCTCCTCCTCTTTTGTTTCGACCAACCACCGC
TCTCACCACCGCCGTCCAACCTTTTTCATTTCATTTCCTTAGCTTCTCTT
CCCATTAAACCAAAACAAAAAACCCCATCTCAAAACAGATCTAAACCACC
CCAAAGATCAATCTTGTTTGCTATAAAAGTTCTAATATTAGCTTTGCTTT
ATCATTGTTATAGCTACAAACAAATTCTCAATAAAAATGTAGTTCTAGCA
ATGTACTGTGTCCACATCTACATTGAGCTTGAGCTCATCCTAGCCTTGGC
CGCAACCCTTGCTCGAGCCATGTTTGGGTTCGAGTTCGAGCCACAGTTCA
ATGAACCCTACTTGGCTACCTCTTTACAAGATTTTTGGGGTCGTAGATGG
AACCTTATGGTTACTAGTATTCTACGACCAACCGTATATTACCCCATACG
CCGTATTTCTACTCGTTTGCTCGGATCAAGGTGGGCTTCGTTGCCGGCGA
TCGTCGTTGTGTTCGTCGTCTCCGGCTTGATGCATGAATTGATTTTTTAT
TACATGACTCGTGTGGCTCCTAGTTGGGAGGTGACATGGTTTTTCATCTT
ACATGGGGTTGCGGTGGCGGCGGAAGTGGTGGTGAAGAAGGTGGTGCCTG
AGAAAATGAGGTTGCACCCGGTGGTTTCCGGGGCGTCAGCTTTGGGATTT
GTGGCGGTGACTGCCGTTTGGTTGTTTCTCCCGCAGTTAGTGAGGAATGG
TGTAGATGAGAAGAACATTGGAGAGTACTCCAAGGTGATGGATCTTATAA
AGGGTTTGCTTCCATTTTGA
back to top