genemark-Dt_05_GB713-gene-65.104

Gene Overview


Name	genemark-Dt_05_GB713-gene-65.104
Unique Name	genemark-Dt_05_GB713-gene-65.104_NSF_v1
Type	gene
Organism	Gossypium hirsutum (Upland Cotton)

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Dt_05_GB713	chromosome	Dt_05_GB713:65425637..65429451 +	Gossypium hirsutum (AD1) 'B713' genome NSF_v1	n/a

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium hirsutum (AD1) 'B713' genome NSF_v1	2022-01-11

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
genemark-Dt_05_GB713-gene-65.104-mRNA-1	genemark-Dt_05_GB713-gene-65.104_NSF_v1	Gossypium hirsutum	mRNA

The following exon feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
genemark-Dt_05_GB713-gene-65.104-mRNA-1:exon:2127	genemark-Dt_05_GB713-gene-65.104-mRNA-1:exon:2127	Gossypium hirsutum	exon
genemark-Dt_05_GB713-gene-65.104-mRNA-1:exon:2128	genemark-Dt_05_GB713-gene-65.104-mRNA-1:exon:2128	Gossypium hirsutum	exon
genemark-Dt_05_GB713-gene-65.104-mRNA-1:exon:2129	genemark-Dt_05_GB713-gene-65.104-mRNA-1:exon:2129	Gossypium hirsutum	exon

The following CDS feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
genemark-Dt_05_GB713-gene-65.104-mRNA-1:cds	genemark-Dt_05_GB713-gene-65.104-mRNA-1:cds	Gossypium hirsutum	CDS

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
genemark-Dt_05_GB713-gene-65.104	genemark-Dt_05_GB713-gene-65.104_NSF_v1-protein	Gossypium hirsutum	polypeptide

Sequences

The following sequences are available for this feature:

gene from alignment at Dt_05_GB713:65425637..65429451+
coding sequence from alignment at Dt_05_GB713:65425637..65429451+

gene from alignment at Dt_05_GB713:65425637..65429451+

Legend: polypeptidemRNAexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>genemark-Dt_05_GB713-gene-65.104_NSF_v1 ID=genemark-Dt_05_GB713-gene-65.104_NSF_v1; Name=genemark-Dt_05_GB713-gene-65.104; organism=Gossypium hirsutum; type=gene; length=3815bp; location=Sequence derived from: Dt_05_GB713:65425637..65429451+ (Gossypium hirsutum
ATGCGCCACTCACGGTGGACGGTTTTGACAGCTGATGACGTTGACAGTGC
TCTTAATCTGAGAAACGTGGAGGTACATTTTCAAGTTTCAAAAATTTTCT
GTTTATTGTATTTTTTTATTATTCTTTTTCCTTTTTAGTTGAAAATAGTG
CTAATTAATGTTATTTGTTTGACTAATGTGATAATTTCTACTTCATGTGT
ATTAATCCATAAATTTTAACAAGAGTGGAATTTTGAGAACTTAGTTTTGG
AAGTTTGAATCTTAAGTTTAACCTGCTGCTTTAGATTTTGCATTTTGGTT
AACTGGCTTGTGTTATGTGTTTCTCTGGCATCAGCCGATATGTGGATTTG
CCCCTCGTGATGCACTACGATTCAAGAAAGCTGCTGGGCATAAGGATTTG
TTCTACATTGATGACAAAGATGTGGAGTTTAAAGAAGTAAGAACTTATCA
ACAATATTCGAGATTCTGTTATATGTTGCCTTATGTATGTAGGTTCTTGA
GTCACCTTTGCCAAGAGCACCACGTGAATTTATATAAGTATACACATTTT
TATGAAATACAAGATCTTGCTAAAAGAAAAAGCATATAAAAGTATAAACG
TTTTTATGAAATACAAGATTTTACTAAAAGAAAAAGCATCCAATTTTAAG
AATGAAAAATATATGGTAAAAGCATCCATAACTTTTCAATGTAAAAGACA
AAAAAGACTGTAACACCAATGTTGTGGTATTATTTGTTGCCTATAAATAC
CATTCCTATCCTTCTTCTTCCCCTACAGACATAACATGGCCTCCTATCTC
TTTCTCTGCCTATTCCTCTTCTTTCCCCATCTTTATGCTTCTTTTTCTTC
TTCAGGATCTCACTCCTGCTCTTCACTAATCCAATTTAAGGACTCTTTTT
CCATCACAGAGGATGCTTCCTGGCATTGCGATAATTTTGCTGGCCTTAAA
TCTTATCCCAAGACAAATTCATGGAAGTAGGGTACAGATTGCTGCTCATG
GGATGGAGTCACTTGTGACCACCTAAATGCTCATGTTATTGCCCTTGACT
TGAGCTGCAGTTGGCTATATGGCAACTTCCCTTCCAATACCACTCTCTTC
CTTCTTCCTCACCTTCAAAAACTCAACCTTGCCTACAATGATTTTAATCT
TTCCAAAATTCCATCCGAGTTCGGTCGGTTTACAAGCCTATTCTACCTCA
ACCTTTCCCATACAGAGTTTGAAGGAGAAGTCCCATCCCAAGTCTCCCAC
CTGTCAAAATTGGTTTCACTTGATCTCTCCGTTCGGATTGATTACTGTGG
GCATGTTACAATTGACAAACATGCTCTGGAGGGACTTGTTCACAACCTAA
CCGAGGTCAGACATCTGTTTTTGCATGGAATCAACATGTCTTCTGTTAAT
GCTCATGTCTTCATGAATCTATCCTCTTCTCTAAGGTCTCTCAGTCTTGC
TTATTGTGATTTGCAAGGAAAATTCCCAAAAAACATTTTTTATTTTCCAA
ACCTCAATCTCCTCAACTTGGGAGGCAACCAAAACCTCAATCTTGATCCT
TTGAAGTTCAATCGGAGCAGCAATCTTGAACATTTGGATCTGTCGTGGAT
GTCCTCCTCTACAGAATCCATTGATTCAGTTGATAATCTACAGGCCTTAA
AGTACTTAGATCTATCAGGAAATTCTTTCTTTCAACGATTGTCTGTCTCA
ATCACAAAATTATCTTATTTGGAGTACTTGATACTTGAAGGCGCAAATTT
TTTTGGAGGATTGCCTGACTCGATGGGGAATCTCGTGTCCTTGAAGTTTT
TAGACTTGAGATCAAACAAATTGAGTGGACAAATTCCATTGTCAATTCTA
AACCTAACGCAGCTGGAATATTTGGGAATATCTAATAATTCTTTAGAAGG
TTCCATTCCAGATGAGGTAACCGCTTTTCCTAATCTAAAATATTTATACT
TATCTGACAATTTACTCAATGGAACACTTCCGTCATGGTTGTATACTGTT
CCCTCCTTAAAGATAATATATCTCTTTCAAAATCAATTCAGTGGGCATAT
CAAAGAATTCCAATCCAAATCACTAGAATTGATAGTGTTAGAGAATAATA
AACTCCAAGGTCCTCTTCCATCTTCAATATTCCAACTTCTCAATCTTACC
CACCTCGTTTTATCCTCAAATAATCTCAGTGGTGTCATAGAGTTTCGCAT
GTTCTCAAACCTTCCAAATCTAGAAGTTCTCGACCTTTCATATAACAGCC
TATCCTTAACATCTAATACTACTTCTACTGTTAATCTTACAAGCTTAATT
TTGTCATCTTGCAATCTTAGTGAATTCCCCCAATTTTTAAAAGGGCTTAA
AAGGTTGGAAAGGTTAGACCTGTCTTGCAACAAAATTGAAGGCAAGATTC
CACAGTGGATGCAAGGGGTGGGGAATGGCTTTTTGACTTACTTAAATGTA
TCTCACAACTCTTTGACAGAAGTTGAGCACTTTCCGTGGAATAATATTGC
AGTTCTGGACTTAAGCTCCAATTTGATCCGTGGAAATCTTCCGATTCCAG
CTTCGACGATCAGTGTCTTTCTGATCTCAAATAATAGTTTCAATGGAGAG
GTCTCTTCTTTAATATGCAATGCCAGTTCTCTTCAAATTCTTGATTTGTC
CTACAATAACTTGAGTGGAACAATTCCGCAATGTTTTGGAAATTTGAGCG
ACAGCCTTGAATTCTTGAATCTGAAGAAGAACAAGTTTTATGGGACGATT
CCTCCAACATTTGCAGAGGGATGCCAGTTGACTAATTTCAACTTAAATGG
AAATCTGTTAGAAGGGCCTTTGACACCATCCATCCTTAATTGTAGAGGTC
TGGAAGTGCTAGATCTTGGTCACAACAAGATCAATGATACATTTCCTCAT
TGGTTGGGAAATCTTCCATATTTGCAAGTTCTTGTATTGAAGTCAAATCA
TATGCATGGTTCTTTGCGTGTCAATAGCTCCAAGTCTAGCCCCTTTTTCT
CTAAAATCCAAATTTTTGACCTCTCAAGTAATTATTTTTCTGGACCCCTA
CCTGTGAGGTACATCAACAGCTTCAAGGCTATCAGAAATCTAGAGAAGAT
TCGTAGTACAGTGTCGTACATGGGGGTGAATTGTCGGAATGGTAGTGGCT
TCTATACCTATTCCATTGGAATTGTTATGAAAGGACAATATATGGAATTG
GTGAAAATTTTCACCATGTGGATGATCATTGATCTATCAAACAATCAGTT
TGAAGGGGGTATTCCAGAGGTTTTTGGAAAGCTTAACTTACTGAAAGGGC
TCAACCTTTCTCATAATAACCTTAGTGGTGGTATCCCCACCTCAATAGGG
AATTTGACAAGTCTTGAATGGTTGGACCTATCTTCAAACAGGTTGTCTGG
GACGATTCCAAATAGATTGGCAGTTCTGCCATTTCTTTCGTCCTTCAATG
TTTCTGAAAATCAACTCTATGGTCAGATTCCTCAAGGAAAACAATTCAAC
ACATTTGGAAATGATTCATATCAAGGGAATAAGGGACTATGTGGGTTTCC
AGTCTCGAAAGGTTGCAACATCATTGAGCCAGCACCTCCAAATGTGCTTG
AAAAAGATGGCTCAAAATCAAACATTACTTTTGGTTGGAAAGTGGTGTTG
ATAGGTTATGGATGCGGAGTGGTGTTCGGAATGTCCGTGGGATATGTTGT
TTTCCAAACTGGTAAGCCGAAATGGTTGGTGAATTTGGTTGAAATCCAAC
ATGAGAAGATGCGAAGAAGAAAGTCAAAGGATGGCAGTCGCAGCAATGGA
CGAAGAAGGATCTAG

Coding sequence (CDS) from alignment at Dt_05_GB713:65425637..65429451+

>genemark-Dt_05_GB713-gene-65.104_NSF_v1 ID=genemark-Dt_05_GB713-gene-65.104_NSF_v1; Name=genemark-Dt_05_GB713-gene-65.104; organism=Gossypium hirsutum; type=CDS; length=3009bp; location=Sequence derived from: Dt_05_GB713:65425637..65429451+ (Gossypium hirsutum
ATGCGCCACTCACGGTGGACGGTTTTGACAGCTGATGACGTTGACAGTGC
TCTTAATCTGAGAAACGTGGAGCCGATATGTGGATTTGCCCCTCGTGATG
CACTACGATTCAAGAAAGCTGCTGGGCATAAGGATTTGTTCTACATTGAT
GACAAAGATGTGGAGTTTAAAGAAGGTACAGATTGCTGCTCATGGGATGG
AGTCACTTGTGACCACCTAAATGCTCATGTTATTGCCCTTGACTTGAGCT
GCAGTTGGCTATATGGCAACTTCCCTTCCAATACCACTCTCTTCCTTCTT
CCTCACCTTCAAAAACTCAACCTTGCCTACAATGATTTTAATCTTTCCAA
AATTCCATCCGAGTTCGGTCGGTTTACAAGCCTATTCTACCTCAACCTTT
CCCATACAGAGTTTGAAGGAGAAGTCCCATCCCAAGTCTCCCACCTGTCA
AAATTGGTTTCACTTGATCTCTCCGTTCGGATTGATTACTGTGGGCATGT
TACAATTGACAAACATGCTCTGGAGGGACTTGTTCACAACCTAACCGAGG
TCAGACATCTGTTTTTGCATGGAATCAACATGTCTTCTGTTAATGCTCAT
GTCTTCATGAATCTATCCTCTTCTCTAAGGTCTCTCAGTCTTGCTTATTG
TGATTTGCAAGGAAAATTCCCAAAAAACATTTTTTATTTTCCAAACCTCA
ATCTCCTCAACTTGGGAGGCAACCAAAACCTCAATCTTGATCCTTTGAAG
TTCAATCGGAGCAGCAATCTTGAACATTTGGATCTGTCGTGGATGTCCTC
CTCTACAGAATCCATTGATTCAGTTGATAATCTACAGGCCTTAAAGTACT
TAGATCTATCAGGAAATTCTTTCTTTCAACGATTGTCTGTCTCAATCACA
AAATTATCTTATTTGGAGTACTTGATACTTGAAGGCGCAAATTTTTTTGG
AGGATTGCCTGACTCGATGGGGAATCTCGTGTCCTTGAAGTTTTTAGACT
TGAGATCAAACAAATTGAGTGGACAAATTCCATTGTCAATTCTAAACCTA
ACGCAGCTGGAATATTTGGGAATATCTAATAATTCTTTAGAAGGTTCCAT
TCCAGATGAGGTAACCGCTTTTCCTAATCTAAAATATTTATACTTATCTG
ACAATTTACTCAATGGAACACTTCCGTCATGGTTGTATACTGTTCCCTCC
TTAAAGATAATATATCTCTTTCAAAATCAATTCAGTGGGCATATCAAAGA
ATTCCAATCCAAATCACTAGAATTGATAGTGTTAGAGAATAATAAACTCC
AAGGTCCTCTTCCATCTTCAATATTCCAACTTCTCAATCTTACCCACCTC
GTTTTATCCTCAAATAATCTCAGTGGTGTCATAGAGTTTCGCATGTTCTC
AAACCTTCCAAATCTAGAAGTTCTCGACCTTTCATATAACAGCCTATCCT
TAACATCTAATACTACTTCTACTGTTAATCTTACAAGCTTAATTTTGTCA
TCTTGCAATCTTAGTGAATTCCCCCAATTTTTAAAAGGGCTTAAAAGGTT
GGAAAGGTTAGACCTGTCTTGCAACAAAATTGAAGGCAAGATTCCACAGT
GGATGCAAGGGGTGGGGAATGGCTTTTTGACTTACTTAAATGTATCTCAC
AACTCTTTGACAGAAGTTGAGCACTTTCCGTGGAATAATATTGCAGTTCT
GGACTTAAGCTCCAATTTGATCCGTGGAAATCTTCCGATTCCAGCTTCGA
CGATCAGTGTCTTTCTGATCTCAAATAATAGTTTCAATGGAGAGGTCTCT
TCTTTAATATGCAATGCCAGTTCTCTTCAAATTCTTGATTTGTCCTACAA
TAACTTGAGTGGAACAATTCCGCAATGTTTTGGAAATTTGAGCGACAGCC
TTGAATTCTTGAATCTGAAGAAGAACAAGTTTTATGGGACGATTCCTCCA
ACATTTGCAGAGGGATGCCAGTTGACTAATTTCAACTTAAATGGAAATCT
GTTAGAAGGGCCTTTGACACCATCCATCCTTAATTGTAGAGGTCTGGAAG
TGCTAGATCTTGGTCACAACAAGATCAATGATACATTTCCTCATTGGTTG
GGAAATCTTCCATATTTGCAAGTTCTTGTATTGAAGTCAAATCATATGCA
TGGTTCTTTGCGTGTCAATAGCTCCAAGTCTAGCCCCTTTTTCTCTAAAA
TCCAAATTTTTGACCTCTCAAGTAATTATTTTTCTGGACCCCTACCTGTG
AGGTACATCAACAGCTTCAAGGCTATCAGAAATCTAGAGAAGATTCGTAG
TACAGTGTCGTACATGGGGGTGAATTGTCGGAATGGTAGTGGCTTCTATA
CCTATTCCATTGGAATTGTTATGAAAGGACAATATATGGAATTGGTGAAA
ATTTTCACCATGTGGATGATCATTGATCTATCAAACAATCAGTTTGAAGG
GGGTATTCCAGAGGTTTTTGGAAAGCTTAACTTACTGAAAGGGCTCAACC
TTTCTCATAATAACCTTAGTGGTGGTATCCCCACCTCAATAGGGAATTTG
ACAAGTCTTGAATGGTTGGACCTATCTTCAAACAGGTTGTCTGGGACGAT
TCCAAATAGATTGGCAGTTCTGCCATTTCTTTCGTCCTTCAATGTTTCTG
AAAATCAACTCTATGGTCAGATTCCTCAAGGAAAACAATTCAACACATTT
GGAAATGATTCATATCAAGGGAATAAGGGACTATGTGGGTTTCCAGTCTC
GAAAGGTTGCAACATCATTGAGCCAGCACCTCCAAATGTGCTTGAAAAAG
ATGGCTCAAAATCAAACATTACTTTTGGTTGGAAAGTGGTGTTGATAGGT
TATGGATGCGGAGTGGTGTTCGGAATGTCCGTGGGATATGTTGTTTTCCA
AACTGGTAAGCCGAAATGGTTGGTGAATTTGGTTGAAATCCAACATGAGA
AGATGCGAAGAAGAAAGTCAAAGGATGGCAGTCGCAGCAATGGACGAAGA
AGGATCTAG

Search form

genemark-Dt_05_GB713-gene-65.104