genemark-Dt_05_GB713-gene-64.80

Gene Overview


Name	genemark-Dt_05_GB713-gene-64.80
Unique Name	genemark-Dt_05_GB713-gene-64.80_NSF_v1
Type	gene
Organism	Gossypium hirsutum (Upland Cotton)

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Dt_05_GB713	chromosome	Dt_05_GB713:64138508..64142736 +	Gossypium hirsutum (AD1) 'B713' genome NSF_v1	n/a

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium hirsutum (AD1) 'B713' genome NSF_v1	2022-01-11

Relationships

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
genemark-Dt_05_GB713-gene-64.80	genemark-Dt_05_GB713-gene-64.80_NSF_v1-protein	Gossypium hirsutum	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
genemark-Dt_05_GB713-gene-64.80-mRNA-1	genemark-Dt_05_GB713-gene-64.80_NSF_v1	Gossypium hirsutum	mRNA

The following exon feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
genemark-Dt_05_GB713-gene-64.80-mRNA-1:exon:2712	genemark-Dt_05_GB713-gene-64.80-mRNA-1:exon:2712	Gossypium hirsutum	exon
genemark-Dt_05_GB713-gene-64.80-mRNA-1:exon:2713	genemark-Dt_05_GB713-gene-64.80-mRNA-1:exon:2713	Gossypium hirsutum	exon
genemark-Dt_05_GB713-gene-64.80-mRNA-1:exon:2714	genemark-Dt_05_GB713-gene-64.80-mRNA-1:exon:2714	Gossypium hirsutum	exon
genemark-Dt_05_GB713-gene-64.80-mRNA-1:exon:2715	genemark-Dt_05_GB713-gene-64.80-mRNA-1:exon:2715	Gossypium hirsutum	exon

The following CDS feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
genemark-Dt_05_GB713-gene-64.80-mRNA-1:cds	genemark-Dt_05_GB713-gene-64.80-mRNA-1:cds	Gossypium hirsutum	CDS

Sequences

The following sequences are available for this feature:

gene from alignment at Dt_05_GB713:64138508..64142736+
coding sequence from alignment at Dt_05_GB713:64138508..64142736+

gene from alignment at Dt_05_GB713:64138508..64142736+

Legend: polypeptidemRNAexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>genemark-Dt_05_GB713-gene-64.80_NSF_v1 ID=genemark-Dt_05_GB713-gene-64.80_NSF_v1; Name=genemark-Dt_05_GB713-gene-64.80; organism=Gossypium hirsutum; type=gene; length=4229bp; location=Sequence derived from: Dt_05_GB713:64138508..64142736+ (Gossypium hirsutum
ATGTCTGTCTTTGGAGAGGCTGCTCTTTCTGCCTTTTTGGAGCTGTTGTC
TGCCAAGTTGCTTGACTCTGTACTCAGCTTTGTGGCCGATCACCGGCAAC
TCCACCAGCAACTCAAGCTGTGGCAATCCATATTCCCCGAGATCAAAGCA
GTGTTGAACCATGCAGAGGAGAAGCAGATCAAGGACGAGGGTGTGAAGAA
TTGGTTGGACGATCTCCAAGACTTAGCTTACGATGTGGATGACATCTTGG
ACGAGTTCGCTTACCAAGAGTTACGTCTCAAGCTCCAAAAAACTCAAGCA
CAAGCCAGCTCTAGTAAGGTACGGAAACTCATTCCAACCTGCTGTACTGG
TGGTCATTTCTCTCCATTCTCTTTTATGTTCAATGCTAAGATGATTTCAA
AGATACAAGCAATCACTGATAGACTGAATAGTTTGAACACTCGAAGAAGT
AGTTTGGGGTTCAGTGAGATCATGTCTCAAGGCGCAACTTCCAAGGGAAA
GAAACCCAGGCTGCAACCAACTTCCCTGATGGATGGAGCAGTGGAGTATA
TTGGTAGAGCCAATGAGAAGCAAGAAACGCTTGAGTTGCTCAAAAGTAAC
AATTCCGATGGAGTTTGTGTCCTTTCCATCCTTGGCATGGGAGGGATGGG
GAAAACAACTCTTGCTCAGCTTGTTTTCAATGATCCCAGCATTAAGGAGT
CTTTCGATCAGAAGTCCTGGGTATGCGTTTCTGATGACTTTGATGCTGTT
AACATAACAAAGACGATTTTAAGATCCCTCGATGCTGACTCACGTGATGA
GAATGACTTGAACTTGCTTCAAGTCAAGTTGAAGGAGAAGTTATCCGGAA
AAAGGTTGTTGCTTGTTTTAGATGACATTTGGAATGAGAGTTACAGTGAT
TGGACCATCTTACGGGCACCATTTGGAGCAGGAACCAAGATTATTGTAAC
AACTCGACTCCAAAAGGTTTCATTTAATGTCGATTCGGTGAAAGCGTTTT
ACTTGGATAAACTCTCGCATCATGATTGTTTATCCATATTTGCTCAGCAT
GCATTGAAAGCAAGAAACTTTGATGGGCATCTCCAATTTAAAGAAATTGG
AGAGAACTTAGTGAGAAGGTGCAACGGCTTACCTTTGGCAGCAAAAGCCA
TTGGAAGCTTATTACGCACAGTTACGGATCATAGTGAATGGGAAAAAGTA
TATGAGAGCGAGATATGGGACCTTCCAGAAGATCCATGTGGCTTAATTCC
AGCTTTGCGATTAAGCTACCATTATCTTCCTCCTCATTTGAAACGATGCT
TTGCATACTGCTCCATATTTCCTAAAGATTATGAATTTGAAGAAGAAGAG
ATAATCTTGTTATGGAGAGCAGAAGGTTTCTTGCAATCAAAAGCTAAAAT
TCAAGGCAAAGGTCTTGGAAACCAATATTTTTAAGATCTAGTGTCAAGGT
CATTTTTTCAAATATCTAGTAAAGACAAATCCCGTTTCGTGATGCATGAT
CTTATGAATGATTTAGCTCAATCAGTTGCAGGAGAATTATGGTGCAGAGT
GGAGGGTGAAAAGCAACAAAAAATTTTGCATCGTTCTCGCCACTCAGCTT
ATGTTATCGATGATCGGTATCAGAGTGTAAAGATGTTTGAGGCATTTTAT
CAAATGACTTCTTTACGTACTTTCTTACACTTAATGGCTCCAAGAAATAA
GGTATTCTATTTATCTAACGCTGTCTTGGATGATTTATTGCCAAGACTTA
GCTACTTAAGGGTTCTTTCTTTGGGTGGGTATGAGATCTATGATTTGCCC
GACTTTTTTGAAAATTTAAAACATCTACGCTACTTAAATTTTTCTAGAAC
CCGAATCAATCGTTTACCTGATTCTTTGTGTACTCTTTATCATTTGGAGA
CTTTAATCTTAAGAGATTGTTCAAAGCTCAAAAATTTACCCTCGAAGATC
GGAAACCTTGTCAACTTGCATTTTCTTGATATTAGAGGTGCGGATTCAAT
AGAAAGGATGCCCTCTGGATTTGATCAGCTAACTCAGCTTCAAACGTTAT
CTAATTTTGTTATAGGGGAAGGTGATGGACGTCTTATAAGAGAATTGAAA
AATTTGTCAAACCTTAGAGGTAATTTTTGTCTTTCTGGATTGGAGAATGT
TAATGGTCAAGATGCGAGGGAAGCTAAGTTAAATGAGAAGCTAGGGATTG
ATGGGTTAGAACTGCAATGGGGTACAGACTTGGAGGAAACAGAAGTTGAA
GAGCGGGTGTTGGACTTTCTTCATCCTCCGAAAAAGCTTGAGCAACTCAT
CATTGAGAATTACGGGGGTGTAAAATTCTCATCTTGGATAGCAGATTCTT
CCCTCAAGAATTTGTCATCTTTGAAGTTCGCGATTGTAAAAACTGCAAGT
CACTACCATCAGTTGGAAGGTTGCCATTGTTAAAAGATCTTTCAATTATT
GGTTTCGATCAAGTACAGAAGATTGGTGTTGAGCTCTTCGGAGAAAATCA
ATTGAATCCATTTGCATCATTAGAGATTCTGTCTTTTGAGAGTCTTCCAA
ACTGGAAGGAGTGGGACACTTGTGAAGGAGACAATAAGGTTTTAAATCTC
CCCAGCCTTCGTGTGCTTTCAATCAAAACCTGTCCTAAATTGTTGGGAAG
GTTGCCTACCCATCTTCCTTCCTTGCAAAAACTTGAAATTCATACGTGTA
CGAGTTTGGTAGTTTCATTATCAAGTTTCCTGTCACTGTGTGAATTAAGT
ATACGAGGGTGTGCAGAACTGGTGGATGATTGCTCTTCTCCTGCAAAGGA
GCTTTCCTCTTTGCAAACTTTGTCTCTTTCTAACATTTCAAAGTTTAATA
TTCCAGCAGATAGGACAATGTTGAGGTTTGGAAACTCAGAACATTTTGAA
ATTGATGGTTGGGAGGAGTTGGCATCTGTATCACGGTATGGGTTTAGTTT
AGTTGGACATCGTTTCATTTCCGTTTCGCGTTGTCCTCAACTGCAGTCTT
TGGAAGCAGAGGAAGCCGAATTGCAACCTGACAAGATGTCACGTGTTGAA
TCTCTAGAGATAGCCTCTTGTGATAGGCTCAATAGACTGCCACAAGTCTT
ACATGCACTCACATTCCTTACAATGATGGAAATTCAGGGTTGTCGAGGCT
TGGTTTCTTTTGCAGAGAATAACTTACCTCCTAATTTAAAAAAGCTGAGA
ATTAGCAACTGTGAGAATTTGGAGTATTTGGTTGATGAAAAAGAAGATAA
TAAGAGTATGAGTAGTACCCTCTGTCTTCTCGAGGACTTGAAAATCTGTG
AGTGTCCATCTCTAATGTCTTTGTCATCGCAGGGGCACAAAAATATTTGC
AATCAGCTTCAACTTCTCAATATTCGCCATTGCTCAAAGTTGAGTTGCCT
ATTTTCAAACACCAAGTTTCCCATAACGCTTAAAGATTTGAGAATTGTGG
GATGTCCAGAGTTGGAATAAATAGCCGAGGAGTTTGAGGAAAGCGCTTGT
CTTGAATTTATGAAAATTATAGTTTCTGGAATAAAATCTCTACCACGAGG
ACTAAACAAGCTCAAACATCTCCAGGAGATTTGTTTGGATTCGTGTTCAA
ATTTGGTTTCTTTTGAAGAAAGTGGGTTGAGCACCAGCTTCAGAGCTTTC
CAAGTTACTGGTTGTGTAAATTTTGGAGCCCTTCCTAAGTGCATTGCCAG
CAGCACCTCCCTTCGACGATTAAGTGTGAGCAACTATTCGGCTGGCATAT
CATTTCCATCGGAGGGATTCCCTGCCAATCTCACATCACTTGCAATCTCA
AACGCACCCAAGATTTATAGGTCACTTGTGGAATGGGGATTAAATAGACT
CACCTCTCTTCAAACATTGGCCATCGGAGGTGGAGGATGCTCAAACGTGG
TGTCGTTCCCAGAAAAAGGCACTGGAATGAAGCTGCCTCCTTCTCTCACC
TGTATCTATCTTTTCCAATTTGAGAACCTGGAATTCATGTTCTCTGAGGG
CTTTCAAGACCTCGCCTCTCTTCAAAGACTGCATATCAGTGAATGTCCCA
AGCTAACATCTCTTCCGGAAAAAGACATGCTTCGTTCGCTTGGATTTTTA
AGTATTTTCGGTTGTCCGTTGCTGCAAGAAGAGTGCTCAAGCTATAAAGG
ACGAGAGTGGTCTAAGATTTCCCATATATCCCTAGTTCAAATCGATCTTA
AAGCAGTCATCCCGAGGGAATCAGATTGA

Coding sequence (CDS) from alignment at Dt_05_GB713:64138508..64142736+

>genemark-Dt_05_GB713-gene-64.80_NSF_v1 ID=genemark-Dt_05_GB713-gene-64.80_NSF_v1; Name=genemark-Dt_05_GB713-gene-64.80; organism=Gossypium hirsutum; type=CDS; length=3093bp; location=Sequence derived from: Dt_05_GB713:64138508..64142736+ (Gossypium hirsutum
ATGTCTGTCTTTGGAGAGGCTGCTCTTTCTGCCTTTTTGGAGCTGTTGTC
TGCCAAGTTGCTTGACTCTGTACTCAGCTTTGTGGCCGATCACCGGCAAC
TCCACCAGCAACTCAAGCTGTGGCAATCCATATTCCCCGAGATCAAAGCA
GTGTTGAACCATGCAGAGGAGAAGCAGATCAAGGACGAGGGTGTGAAGAA
TTGGTTGGACGATCTCCAAGACTTAGCTTACGATGTGGATGACATCTTGG
ACGAGTTCGCTTACCAAGAGTTACGTCTCAAGCTCCAAAAAACTCAAGCA
CAAGCCAGCTCTAGTAAGGTACGGAAACTCATTCCAACCTGCTGTACTGG
TGGTCATTTCTCTCCATTCTCTTTTATGTTCAATGCTAAGATGATTTCAA
AGATACAAGCAATCACTGATAGACTGAATAGTTTGAACACTCGAAGAAGT
AGTTTGGGGTTCAGTGAGATCATGTCTCAAGGCGCAACTTCCAAGGGAAA
GAAACCCAGGCTGCAACCAACTTCCCTGATGGATGGAGCAGTGGAGTATA
TTGGTAGAGCCAATGAGAAGCAAGAAACGCTTGAGTTGCTCAAAAGTAAC
AATTCCGATGGAGTTTGTGTCCTTTCCATCCTTGGCATGGGAGGGATGGG
GAAAACAACTCTTGCTCAGCTTGTTTTCAATGATCCCAGCATTAAGGAGT
CTTTCGATCAGAAGTCCTGGGTATGCGTTTCTGATGACTTTGATGCTGTT
AACATAACAAAGACGATTTTAAGATCCCTCGATGCTGACTCACGTGATGA
GAATGACTTGAACTTGCTTCAAGTCAAGTTGAAGGAGAAGTTATCCGGAA
AAAGGTTGTTGCTTGTTTTAGATGACATTTGGAATGAGAGTTACAGTGAT
TGGACCATCTTACGGGCACCATTTGGAGCAGGAACCAAGATTATTGTAAC
AACTCGACTCCAAAAGGTTTCATTTAATGTCGATTCGGTGAAAGCGTTTT
ACTTGGATAAACTCTCGCATCATGATTGTTTATCCATATTTGCTCAGCAT
GCATTGAAAGCAAGAAACTTTGATGGGCATCTCCAATTTAAAGAAATTGG
AGAGAACTTAGTGAGAAGGTGCAACGGCTTACCTTTGGCAGCAAAAGCCA
TTGGAAGCTTATTACGCACAGTTACGGATCATAGTGAATGGGAAAAAGTA
TATGAGAGCGAGATATGGGACCTTCCAGAAGATCCATGTGGCTTAATTCC
AGCTTTGCGATTAAGCTACCATTATCTTCCTCCTCATTTGAAACGATGCT
TTGCATACTGCTCCATATTTCCTAAAGATTATGAATTTGAAGAAGAAGAG
ATAATCTTGTTATGGAGAGCAGAAGGGGAAGGTGATGGACGTCTTATAAG
AGAATTGAAAAATTTGTCAAACCTTAGAGGTAATTTTTGTCTTTCTGGAT
TGGAGAATGTTAATGGTCAAGATGCGAGGGAAGCTAAGTTAAATGAGAAG
CTAGGGATTGATGGGTTAGAACTGCAATGGGGTACAGACTTGGAGGAAAC
AGAAGTTGAAGAGCGGGTGTTGGACTTTCTTCATCCTCCGAAAAAGCTTG
AGCAACTCATCATTGAGAATTACGGGGGTGTAAAATTCTCATCTTGGATA
GCAGATTCTTCCCTCAAGAATTTGTCATCTTTGAAGTTCGCGATTAAGAT
TGGTGTTGAGCTCTTCGGAGAAAATCAATTGAATCCATTTGCATCATTAG
AGATTCTGTCTTTTGAGAGTCTTCCAAACTGGAAGGAGTGGGACACTTGT
GAAGGAGACAATAAGGTTTTAAATCTCCCCAGCCTTCGTGTGCTTTCAAT
CAAAACCTGTCCTAAATTGTTGGGAAGGTTGCCTACCCATCTTCCTTCCT
TGCAAAAACTTGAAATTCATACGTGTACGAGTTTGGTAGTTTCATTATCA
AGTTTCCTGTCACTGTGTGAATTAAGTATACGAGGGTGTGCAGAACTGGT
GGATGATTGCTCTTCTCCTGCAAAGGAGCTTTCCTCTTTGCAAACTTTGT
CTCTTTCTAACATTTCAAAGTTTAATATTCCAGCAGATAGGACAATGTTG
AGGTTTGGAAACTCAGAACATTTTGAAATTGATGGTTGGGAGGAGTTGGC
ATCTGTATCACGGTATGGGTTTAGTTTAGTTGGACATCGTTTCATTTCCG
TTTCGCGTTGTCCTCAACTGCAGTCTTTGGAAGCAGAGGAAGCCGAATTG
CAACCTGACAAGATGTCACGTGTTGAATCTCTAGAGATAGCCTCTTGTGA
TAGGCTCAATAGACTGCCACAAGTCTTACATGCACTCACATTCCTTACAA
TGATGGAAATTCAGGGTTGTCGAGGCTTGGTTTCTTTTGCAGAGAATAAC
TTACCTCCTAATTTAAAAAAGCTGAGAATTAGCAACTGTGAGAATTTGGA
GTATTTGGTTGATGAAAAAGAAGATAATAAGAAAAGTGGGTTGAGCACCA
GCTTCAGAGCTTTCCAAGTTACTGGTTGTGTAAATTTTGGAGCCCTTCCT
AAGTGCATTGCCAGCAGCACCTCCCTTCGACGATTAAGTGTGAGCAACTA
TTCGGCTGGCATATCATTTCCATCGGAGGGATTCCCTGCCAATCTCACAT
CACTTGCAATCTCAAACGCACCCAAGATTTATAGGTCACTTGTGGAATGG
GGATTAAATAGACTCACCTCTCTTCAAACATTGGCCATCGGAGGTGGAGG
ATGCTCAAACGTGGTGTCGTTCCCAGAAAAAGGCACTGGAATGAAGCTGC
CTCCTTCTCTCACCTGTATCTATCTTTTCCAATTTGAGAACCTGGAATTC
ATGTTCTCTGAGGGCTTTCAAGACCTCGCCTCTCTTCAAAGACTGCATAT
CAGTGAATGTCCCAAGCTAACATCTCTTCCGGAAAAAGACATGCTTCGTT
CGCTTGGATTTTTAAGTATTTTCGGTTGTCCGTTGCTGCAAGAAGAGTGC
TCAAGCTATAAAGGACGAGAGTGGTCTAAGATTTCCCATATATCCCTAGT
TCAAATCGATCTTAAAGCAGTCATCCCGAGGGAATCAGATTGA

Search form

genemark-Dt_05_GB713-gene-64.80