augustus_masked-Dt_05_GB713-gene-63.334

Gene Overview


Name	augustus_masked-Dt_05_GB713-gene-63.334
Unique Name	augustus_masked-Dt_05_GB713-gene-63.334_NSF_v1
Type	gene
Organism	Gossypium hirsutum (Upland Cotton)

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Dt_05_GB713	chromosome	Dt_05_GB713:63618143..63621842 +	Gossypium hirsutum (AD1) 'B713' genome NSF_v1	n/a

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium hirsutum (AD1) 'B713' genome NSF_v1	2022-01-11

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1	augustus_masked-Dt_05_GB713-gene-63.334_NSF_v1	Gossypium hirsutum	mRNA

The following exon feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:exon:2529	augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:exon:2529	Gossypium hirsutum	exon
augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:exon:2530	augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:exon:2530	Gossypium hirsutum	exon
augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:exon:2531	augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:exon:2531	Gossypium hirsutum	exon
augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:exon:2532	augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:exon:2532	Gossypium hirsutum	exon
augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:exon:2533	augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:exon:2533	Gossypium hirsutum	exon

The following CDS feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:cds	augustus_masked-Dt_05_GB713-gene-63.334-mRNA-1:cds	Gossypium hirsutum	CDS

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
augustus_masked-Dt_05_GB713-gene-63.334	augustus_masked-Dt_05_GB713-gene-63.334_NSF_v1-protein	Gossypium hirsutum	polypeptide

Sequences

The following sequences are available for this feature:

gene from alignment at Dt_05_GB713:63618143..63621842+
coding sequence from alignment at Dt_05_GB713:63618143..63621842+

gene from alignment at Dt_05_GB713:63618143..63621842+

Legend: polypeptidemRNAexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>augustus_masked-Dt_05_GB713-gene-63.334_NSF_v1 ID=augustus_masked-Dt_05_GB713-gene-63.334_NSF_v1; Name=augustus_masked-Dt_05_GB713-gene-63.334; organism=Gossypium hirsutum; type=gene; length=3700bp; location=Sequence derived from: Dt_05_GB713:63618143..63621842+ (Gossypium hirsutum
ATGAGTAATTCCCAAGTATCCAAATCAACAAAACCTTCAAAGGTTTCAAC
TTTAGCTCCCCCTTCAAACCCTTCAAAACCCTCTTCACTATCTTCTCACC
TTGCAATGGTAGAATTTAAGCAAAGTATTTTAACCTTACTTTCCAAGCTT
TCAGACCGTGACACTTACCAGATTGCCGTTGAAGATCTTGAAAAGATTAT
CCAATCTCTTGCCCCTGAATCCCTTCCCATCTTACTAAACTGCTTATTTG
ATTCTTCCAATGATCCAAAACCAGCTGTAAAAAAAGAATCTTTAAGGTTA
CTTTCAATGCTATGTAATTGCCATGGTGAATTGGCAGCTCCCCAATTGAC
TAAAATCATTGCCCACATTGTTAAAAGGTTAAAAGATGCAGATTCTGGGG
TGAAAGATGCTTGTCGTGATTCCATTGGTGCCCTTTCAGGACAGTATTTG
AAAGGGGAAAATGGAGGGACTATGGTGGGATTGTTTGTAAAGCCGTTGTT
TGAAGCAATGAGTGAACAGAACAAAGGGGTCCAATCTGGTGCAGCAACAT
GTATGGCTAAAATGGTGGAATGTGCTGGTGATCCTCCTTTGACTGCTTTT
CAGAAGCTTTGTCCAAGGATCTGCAAGTTGTTGAATAGTCAGAATTTTAT
GGCTAAGGCTTCCCTTTTGGCAGTAGTGACAAGTTTGTCACAGGTTTGAG
CAATGTAGTTTTTTTTTAGCTTGATTGTTTGATAATTTACATTGTTGAAT
TCATATGGATATTGATGGTTTTATATTGTTAGTTTTTGGAATGTTAAATG
GCAACTCAAGTGATAGTCTTATAGTTTCTTAATTGTTTTACTTTGTGCTT
GTTTATTTGGTTGCTGTTAATGAGCATTTTCTTGGTAAAAGTACCATGGA
GGCCAAGGGCAAATTGCTTTTGTTTTGGTTATAAATTTCAGTCTTTTGTA
CTGTTAAAAACTGAGGATGTTGACTGAATAACTAGAAAATGACACTTGGT
GTGCCACATTTACCTCCTGCTGATGTAGAAGGACCAGTTTTTAATAGTAG
AACTCAATGAAATTTTTCACAGGAGGACCAGTTTGTTTTTTGATCTAATG
TATATGCATAATTTGCCTATTTTTTGAGTAGGGGGGGGGCAAAATGCAAT
CTGATTTCTAGTATAGGTGTCTCCATGGTACTTTTACCACATTTTCTTAT
GTTTGATTGTGCAAAATAGGTAGAAACCTTTTATTAAAGCATTTCGAGAA
AAACGAACTAAATGAAGTTTTTCGAAAAATCATGATGACATTGTTGCAGG
TGGGAGCAATTGCACCTCAGAGCTTGGAAGCTTTGCTGCAAAGCATCCAT
GAATGCCTTGGGAGCACAGATTGGGCGACACGGAAGGCAGCTTCTGATAC
TTTGAGTGCTTTGGCACTTCATTCAAGCAATTTGATTGCAGATAGAGCAT
CTTCAACAATAACGGTATTGGAGGGTTGCCGCTTTGACAGGGTAGCTTTC
TCGATCCATTTTACTTTCATATACTGTTAACATACACTCAATGCCATATG
TATAAGCAACGTAACTCTTGCATTGTGGTCCTCTAAATGATGCTGTTCCT
AGGTGTTTATATATACATGGTGTTACACTGCCTTATGGAATTCGTATCGT
GTTGAATAATGTTTAATTATTGGTAAAACAGATGAAACCTGTGAGAGATG
CCATGAATGAAGCTTTGCAATTATGGAAGAAGATTGCAGGGAAAGGGGAT
GATGGAGGCATAGATGATCAGAAGTCTCATGGTAAATATATGTTAATTAT
GTGTTTCTAAGTTTTATCGGGTTGTCTTGGATAAATTTATTTCAATTACT
GCAGCAGATGGTGACAATCATCAGTCAGATGAATCATCACAAAAGAATGG
CTTGAAAAATCCGAATACTTGTGATAAAAAAACAGATCCATCGGCAAAGG
ATTCGTCTAATAATCTTTCCCCTTATTTGGATTCTGTTTCAGAAGGCAAA
TGTGGAACCATTCCTGACAAAGCAGTTGTAATTTTAAAGAAGAAAGCACT
TCTATTAACAGACAAAGAGTTAAATCCCGAATTCTTCCAGAAACTTAAAA
CAAGGGGTTCTGGTGATTTGCCGGTTGAAGTAGTTGTTCCTCGTAGATAC
CTTAATTCTTCAAACTCAAAGAACGAGGAAGAATCAGAACCAAATGATTC
AGACTTGAGAAGAAGGTCGAATTATATGGGAAACAACCAGGCAGATGATT
TCCATGCATCCTCTGGCAGCACAAACCATAACATTGATAGAGGAGCTTCT
GGTGTATCGGATAAATGGCCTGAAGAGAAGAAAAATGGAAAAGACTTAAG
AACAAAGGCGTTTGATGGTGATGATAGGATAGATGTAAATCAAAGAGAAC
CATCCGGAAATCGTTTGGGTTTCTCAAAGGTGGATGGACAGTCTGATGGA
TCCTTTATCAACAACAAAGGAAATTGGTTGGCTATCCAAAGGCAGTTATT
GCAGCTTGAGAGGCAGCAAGGGCATCTCATGAACATGTTGCAGGAGTTTA
TGGGCGGTTCTCATGATAGCATGGTAACTTTGGAGAACAGAGTTAGGGGT
CTTGAGAGCATTGTTGAAGACATGGCTCGGGATTTATCAATATCATCGGG
AAGGAGAGGTTGTAATTTTATGGCTGGATTTGAAGGATCGTCTAATAGAC
CTTTAGGGAAGTATACTGGCTACTCTGACTATGGTTCCAAGTTCAATGGA
CGAATCCCATATGGAGAAAGGTTTGCACAGACCGACGGAATTGCTCCAGT
TGGGAGAGGAAGGGGACCTTCTTGGAGATCTGAAACATCTGATGATTGGG
ATTTCCCTGCATTTAATGCTTCGAGGAATGGACAATTTCAATCAAGAAGA
GCTCCAGCTAGCAGCGGCCCGGATGGTAGATCACCCAAATCAGAACACGA
GAGTGATCAGATTGGTGACAGGAGAGGTTGGGACAAGGGTCCTGGGCCTG
TAAGACTTGGTGAAGGACCTTCAGCTAGAAGTGTCTGGCAGGCATCGAAG
GATGAAGCAACCTTGGAAGCAATTCGTGTTGCTGGGGAGGATAATGGAGC
ATCTCGAACTGGACGTGTGCCTGAATTAACTGCTGAAGCTCTAGTAGATG
ATAATGTTGGACCAGAACGAGATCCGGTCTGGACTTCTTGGAGCAATGCA
ATGCATGCCCTTCAAGTAGGCGATATAGATTCTGCTTACGCTGAAGTTCT
ATCAACGGGTGATGATCTCTTGCTTATAAAGCTAATGGACAAATCGGGTC
CTATGGTTGACCAACTATCAAATGAGATAGCAAACGAAACCTTGCATGCT
ATCGTGCAATTCCTTCTAGAACCAGATTTGTTCGATATTTGTCTCTCCTG
GATTCAACAGGTATCAGTTCTCATCTCAATCTCTTACCATTCAAAGTTCA
AGATGCTTTGTCGAGTCTCTAATTAGTTTTATTTCTCTTATAACTTTTTC
AGCTAGTTGAAGTGGTGTTAGAAAATGAATCGAACGCATTAGGTATTCCG
ATGGAGTTGAAGAAAGAGCTTTTATTGAATTTGCATGAAGCGGCATCCAC
AATGGATCCACCGGAGGATTGGGAAGGCTTGGCACCCAACCAACTCTTAT
TGCAGTTAGCATCTGCCTGGGGGATTGAATTGCAACAATTTGGTAAGTAA

Coding sequence (CDS) from alignment at Dt_05_GB713:63618143..63621842+

>augustus_masked-Dt_05_GB713-gene-63.334_NSF_v1 ID=augustus_masked-Dt_05_GB713-gene-63.334_NSF_v1; Name=augustus_masked-Dt_05_GB713-gene-63.334; organism=Gossypium hirsutum; type=CDS; length=2739bp; location=Sequence derived from: Dt_05_GB713:63618143..63621842+ (Gossypium hirsutum
ATGAGTAATTCCCAAGTATCCAAATCAACAAAACCTTCAAAGGTTTCAAC
TTTAGCTCCCCCTTCAAACCCTTCAAAACCCTCTTCACTATCTTCTCACC
TTGCAATGGTAGAATTTAAGCAAAGTATTTTAACCTTACTTTCCAAGCTT
TCAGACCGTGACACTTACCAGATTGCCGTTGAAGATCTTGAAAAGATTAT
CCAATCTCTTGCCCCTGAATCCCTTCCCATCTTACTAAACTGCTTATTTG
ATTCTTCCAATGATCCAAAACCAGCTGTAAAAAAAGAATCTTTAAGGTTA
CTTTCAATGCTATGTAATTGCCATGGTGAATTGGCAGCTCCCCAATTGAC
TAAAATCATTGCCCACATTGTTAAAAGGTTAAAAGATGCAGATTCTGGGG
TGAAAGATGCTTGTCGTGATTCCATTGGTGCCCTTTCAGGACAGTATTTG
AAAGGGGAAAATGGAGGGACTATGGTGGGATTGTTTGTAAAGCCGTTGTT
TGAAGCAATGAGTGAACAGAACAAAGGGGTCCAATCTGGTGCAGCAACAT
GTATGGCTAAAATGGTGGAATGTGCTGGTGATCCTCCTTTGACTGCTTTT
CAGAAGCTTTGTCCAAGGATCTGCAAGTTGTTGAATAGTCAGAATTTTAT
GGCTAAGGCTTCCCTTTTGGCAGTAGTGACAAGTTTGTCACAGGTGGGAG
CAATTGCACCTCAGAGCTTGGAAGCTTTGCTGCAAAGCATCCATGAATGC
CTTGGGAGCACAGATTGGGCGACACGGAAGGCAGCTTCTGATACTTTGAG
TGCTTTGGCACTTCATTCAAGCAATTTGATTGCAGATAGAGCATCTTCAA
CAATAACGGTATTGGAGGGTTGCCGCTTTGACAGGATGAAACCTGTGAGA
GATGCCATGAATGAAGCTTTGCAATTATGGAAGAAGATTGCAGGGAAAGG
GGATGATGGAGGCATAGATGATCAGAAGTCTCATGCAGATGGTGACAATC
ATCAGTCAGATGAATCATCACAAAAGAATGGCTTGAAAAATCCGAATACT
TGTGATAAAAAAACAGATCCATCGGCAAAGGATTCGTCTAATAATCTTTC
CCCTTATTTGGATTCTGTTTCAGAAGGCAAATGTGGAACCATTCCTGACA
AAGCAGTTGTAATTTTAAAGAAGAAAGCACTTCTATTAACAGACAAAGAG
TTAAATCCCGAATTCTTCCAGAAACTTAAAACAAGGGGTTCTGGTGATTT
GCCGGTTGAAGTAGTTGTTCCTCGTAGATACCTTAATTCTTCAAACTCAA
AGAACGAGGAAGAATCAGAACCAAATGATTCAGACTTGAGAAGAAGGTCG
AATTATATGGGAAACAACCAGGCAGATGATTTCCATGCATCCTCTGGCAG
CACAAACCATAACATTGATAGAGGAGCTTCTGGTGTATCGGATAAATGGC
CTGAAGAGAAGAAAAATGGAAAAGACTTAAGAACAAAGGCGTTTGATGGT
GATGATAGGATAGATGTAAATCAAAGAGAACCATCCGGAAATCGTTTGGG
TTTCTCAAAGGTGGATGGACAGTCTGATGGATCCTTTATCAACAACAAAG
GAAATTGGTTGGCTATCCAAAGGCAGTTATTGCAGCTTGAGAGGCAGCAA
GGGCATCTCATGAACATGTTGCAGGAGTTTATGGGCGGTTCTCATGATAG
CATGGTAACTTTGGAGAACAGAGTTAGGGGTCTTGAGAGCATTGTTGAAG
ACATGGCTCGGGATTTATCAATATCATCGGGAAGGAGAGGTTGTAATTTT
ATGGCTGGATTTGAAGGATCGTCTAATAGACCTTTAGGGAAGTATACTGG
CTACTCTGACTATGGTTCCAAGTTCAATGGACGAATCCCATATGGAGAAA
GGTTTGCACAGACCGACGGAATTGCTCCAGTTGGGAGAGGAAGGGGACCT
TCTTGGAGATCTGAAACATCTGATGATTGGGATTTCCCTGCATTTAATGC
TTCGAGGAATGGACAATTTCAATCAAGAAGAGCTCCAGCTAGCAGCGGCC
CGGATGGTAGATCACCCAAATCAGAACACGAGAGTGATCAGATTGGTGAC
AGGAGAGGTTGGGACAAGGGTCCTGGGCCTGTAAGACTTGGTGAAGGACC
TTCAGCTAGAAGTGTCTGGCAGGCATCGAAGGATGAAGCAACCTTGGAAG
CAATTCGTGTTGCTGGGGAGGATAATGGAGCATCTCGAACTGGACGTGTG
CCTGAATTAACTGCTGAAGCTCTAGTAGATGATAATGTTGGACCAGAACG
AGATCCGGTCTGGACTTCTTGGAGCAATGCAATGCATGCCCTTCAAGTAG
GCGATATAGATTCTGCTTACGCTGAAGTTCTATCAACGGGTGATGATCTC
TTGCTTATAAAGCTAATGGACAAATCGGGTCCTATGGTTGACCAACTATC
AAATGAGATAGCAAACGAAACCTTGCATGCTATCGTGCAATTCCTTCTAG
AACCAGATTTGTTCGATATTTGTCTCTCCTGGATTCAACAGCTAGTTGAA
GTGGTGTTAGAAAATGAATCGAACGCATTAGGTATTCCGATGGAGTTGAA
GAAAGAGCTTTTATTGAATTTGCATGAAGCGGCATCCACAATGGATCCAC
CGGAGGATTGGGAAGGCTTGGCACCCAACCAACTCTTATTGCAGTTAGCA
TCTGCCTGGGGGATTGAATTGCAACAATTTGGTAAGTAA

Search form

augustus_masked-Dt_05_GB713-gene-63.334