genemark-At_04_GB713-gene-1.68

Gene Overview


Name	genemark-At_04_GB713-gene-1.68
Unique Name	genemark-At_04_GB713-gene-1.68_NSF_v1
Type	gene
Organism	Gossypium hirsutum (Upland Cotton)

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
At_04_GB713	chromosome	At_04_GB713:1758964..1763557 +	Gossypium hirsutum (AD1) 'B713' genome NSF_v1	n/a

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium hirsutum (AD1) 'B713' genome NSF_v1	2022-01-11

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
genemark-At_04_GB713-gene-1.68-mRNA-1	genemark-At_04_GB713-gene-1.68_NSF_v1	Gossypium hirsutum	mRNA

The following exon feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
genemark-At_04_GB713-gene-1.68-mRNA-1:exon:13	genemark-At_04_GB713-gene-1.68-mRNA-1:exon:13	Gossypium hirsutum	exon
genemark-At_04_GB713-gene-1.68-mRNA-1:exon:14	genemark-At_04_GB713-gene-1.68-mRNA-1:exon:14	Gossypium hirsutum	exon
genemark-At_04_GB713-gene-1.68-mRNA-1:exon:15	genemark-At_04_GB713-gene-1.68-mRNA-1:exon:15	Gossypium hirsutum	exon
genemark-At_04_GB713-gene-1.68-mRNA-1:exon:16	genemark-At_04_GB713-gene-1.68-mRNA-1:exon:16	Gossypium hirsutum	exon
genemark-At_04_GB713-gene-1.68-mRNA-1:exon:17	genemark-At_04_GB713-gene-1.68-mRNA-1:exon:17	Gossypium hirsutum	exon
genemark-At_04_GB713-gene-1.68-mRNA-1:exon:18	genemark-At_04_GB713-gene-1.68-mRNA-1:exon:18	Gossypium hirsutum	exon
genemark-At_04_GB713-gene-1.68-mRNA-1:exon:19	genemark-At_04_GB713-gene-1.68-mRNA-1:exon:19	Gossypium hirsutum	exon
genemark-At_04_GB713-gene-1.68-mRNA-1:exon:20	genemark-At_04_GB713-gene-1.68-mRNA-1:exon:20	Gossypium hirsutum	exon
genemark-At_04_GB713-gene-1.68-mRNA-1:exon:21	genemark-At_04_GB713-gene-1.68-mRNA-1:exon:21	Gossypium hirsutum	exon

The following CDS feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
genemark-At_04_GB713-gene-1.68-mRNA-1:cds	genemark-At_04_GB713-gene-1.68-mRNA-1:cds	Gossypium hirsutum	CDS

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
genemark-At_04_GB713-gene-1.68	genemark-At_04_GB713-gene-1.68_NSF_v1-protein	Gossypium hirsutum	polypeptide

Sequences

The following sequences are available for this feature:

gene from alignment at At_04_GB713:1758964..1763557+
coding sequence from alignment at At_04_GB713:1758964..1763557+

gene from alignment at At_04_GB713:1758964..1763557+

Legend: polypeptidemRNAexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>genemark-At_04_GB713-gene-1.68_NSF_v1 ID=genemark-At_04_GB713-gene-1.68_NSF_v1; Name=genemark-At_04_GB713-gene-1.68; organism=Gossypium hirsutum; type=gene; length=4594bp; location=Sequence derived from: At_04_GB713:1758964..1763557+ (Gossypium hirsutum
ATGGGGCAGATCGTGAAGAGGAAGAAGAAAGGGAGGCCATCGAAGGCGGA
TCTGGCTAAAAGGGGAAGCTCGCCGGCAGCAGCGACGGAATTGGAGCTGC
GGCGGAGTCACCGGCGGAGAAATGTGAGGTATAACATCGATTATGATGAT
TACCTGGACGAAGACTTCGAGGAAGAAGACGAGGAAGAAGAGAGGAGGAG
AGAGAAGAAGCTTAAGCTTATTCTTAAACTTAATCAAGGTCTAGAAGCTG
AACCGCCTTCTCCTCCTGTTTCTTTACCGCCGAGCCGTGGCCGAGGTGTT
GTTTCGTCGTCAGCCGCGCGTGGGAGGCGAACGGCGAAGGAGGAAGTGGA
GGAGGAAGAAGAAGATGAAGATGAGGAAGAGGAAGAAGAGGAAAGTGAGA
GAAGGAAGAGAAAGATTAAAAAGAGAAGAATCAACGTCAGTGATGGAGTT
GATGATGAAGACGAAGAAGAAGAAGAAGACCGACAAGTTGATGATGATGA
AGATGATGATGACGATGGCCGTGTTGATGTGGATGCCGAGGTTTGTATCA
AATCATTTGTACTCTACTGATCTATCAAAGGAGAAGTACAAGCTGAAAGC
AAGCAACTATTTATTGTTTGGGACTTTGGAGGGAACGAGAGAATTTAGGA
GAAAATTAACGGTTTTAAGGGTCAACTGTCAAACCCCCCCCCCAAAAAAA
TCTTCTAACGGAATCTGATCACGCTCCCACCTTTCTCTCTCTATTTATCT
ATCTCTCTCTCCCTCTAAACCATCTGTTTCTCTCTCTAAATCTTTGTGTT
CTACTCTCTGTCTGTAATGTTCGAGTGTACCTATATTGTCCCCTTTAGCT
GTCACTGTCTCCTGTCACTGTCACTGTCTCTGTCTCATTCTCATTTCTCT
CTTCATCTATATATTATATGTAGCTTGTGGGAGACTTTGTAGATGGGTTC
TGGTTTGAGTGTAAGCTTTTATATTTTGATGATTTGTGTTCTTTTAAGGT
TTTGGGTGTTCTGAAGTTTAGGAGTTTTTTTTTGGTTTGACAGATGAGAG
GGAGAAAAGGGGAATCCAAAGGGCAGAACTCGGTTCCAGGTTTGTTTTTG
ATTTATTGTTAGGTCTTCGATTTTTGCTCTGTTTATGGAGCTTTGTTGTA
ATGTGAGTGCTGGGTTTTGAGAATTCAGTGTCTCGGTTTAAGAATGTGGA
ATTTTGATATGGATTTTGGTTGGTTTTTATTAGGGACGCCATCCGATCCT
CCATCAGCGGTTCCATTACCTGATAAGAAGATATTGGAATTGATTCTTGA
TAAACTTCAGAAGTGAGTATTGGACTCCTTTTTTTCTGTTCTTTTTCTTC
TTTCTTCTCTCTACTTGGTGTTGCTTATGCCGGATTGGCTGTGAATCATG
GCAGGAAAGACACGTATGGTGTATATGCGGAACCCGTTGATCCTGAGGAG
GTAAGCAGAATTTACTTCGAAAGTGTTGGCAGCACGTTCCTATTTGGAAT
TCTGGTTTGTTTTGAGTTTAATTTCTTTCGTCTTAGTAAGTTTTTATTGA
TTTTGCAGCTTCCTGATTACCATGATGTGATTGAGCATCCGATGGACTTT
GCCACGGTGAGGAAGAAGTTGGCAAATGGATCTTATTCGACACTGGAACA
ATTTGAGGTATGTGTTCATGGTGTTCTTAGGCTTGGTTTATGTAGCTGAA
GTTCTCTTCTTAGTTGAAGTTCTCCTAATTTTCTACCCCTTTGAACATGG
TATGAAATTAATTGATTTGGGAAAAGAAGAGGCCTCCTTAAGTTCAGCTC
TAGTATTTATTGGAGAAATCGATCTGCATTGCAGCCCCCAAAGTGTATTC
TTGTTCTAAAGATGCCACATGGTGTTCATCAAATTTGAGAAAGTGGAAAT
TGCATAGAACTGGTGTGGAATTTTTTCAATCTTCATAGATGCTTGTGCAT
TATCCTGTAACTGTTTTGGCATCGGGTATGTTTTATGGGTTTTGGGCAAG
AGTGTTGTGGATTGCTGTAATGCAATACAAGATCTGACATATGGAACTTG
AAAATCTTTGTGATAAAGATAAAAGGTTTGGTTGGCATGGCTCAAGTGTT
GAATGTTGCATTTTTGGTCTATTCTATTGGAGAGTTGCTAATATTCATCA
TAATTTTACCAACATTGTTTTCAATTGGCAAATAGTGGTGGCTAGAGTTT
TTATGGTGGTCCTATTGCATTTTCTTTCCTCACTAAGATAACAGATTTGT
TTAAGGTATCTTGAAAGCATAAAAGTAACTCCTTTTGATGGCTGCTGAGG
TTGCAAATTTTCAGATTAGAACACTTTGGTGAAGGTGAAACTTTCTAAAT
GAGCTTGCAAAAACCAAGAAGTACCCCACCATGTTAATTGAGATAGATTG
CCTCTGATTCAGAGCTTCATCTTTCATTTGATCTTGTTTGGTTAATTGGT
TTTCGACATTGTGGAACTGAGGGATATGTTCAGTCTTTGGACAATATGTT
TCCTAGTTCTTGGCTGGGTTTCTACTTCATCATCTTGTTGTCATAGGCTT
TTATTTTTTTAGCATTTTGCAATTAGCTGAATTTTTTGGTTAGGTAAATA
GATTTCGGTTTTTGGTGCTTGTAAATGGAGATGCCTCTGCTTTGTGTTTA
CATTGAGTAGTGTGAACAATATCACCGAATGAACTAAAATGTAGCATTTT
GGTCCACAGTGATCCCCGCTTTCACATTTGCCTTCTCTTGGATTTTTATG
CTTGTTTTTTCTTGGATGCAGAGTGATGTCTTCTTAATATGCTCAAACGC
AATGCAATACAATGCGCCAGATACAGTATACCATAAACAGGTATAATGTT
TTTTTCGCCTCTTCGTTCCTTCCGAATTATAGTTTACTTTTGATTATCTT
TTGGTTTTCTGAGTTCTGACTATAAGTTATTATGCGAAGGCAAGGTCCAT
TCAAGAGCTGGCCATGAAAAAGTTTGAGAAGTTAAGGATTGATGTAGACC
GGTCTGAGAAAGATAGCAAGATTGAACAGAAAACAAAATCAAACTTCTTA
GCAAAGAAGCAAACCAGAAAACCTTTATACCTTACAACACAGGAACCTGT
TGGTTCTGATTTCTCTTCAGGGGCCATTCTTGCCACTTCTGGAGATATCC
TGAACACTTCCATCGCTATCCAAGCTAATGCTTGTGGGAGGCCTAGCCAT
ACTGATGTACTCGTAGATGGTAACTCATCTGTGCCTGATTATAATCGAGA
GAAAACTGAAGAACTATCGTCAGGTATTGAGTTCCCTTTCGGACCCATAT
TTCCACTTTCAATAGTGGCTTTTTAATTGTTGATAAGGGCCTTATACATG
TGGCAGTGTTGTTTTAGCTCTTAAATTATTCTTTCGTGTCTTAGGGAAGG
GTCTTCTTTCTAAATTTGGGAGGAGGACAACTGCACTTGATGATAATCGT
CGTGCAACATATAACATATCTAATCAACCGGTGGTTAGATCGGATTCGAT
ATTTACGACCTTTGAGGCTGAAATCAAGCAGCTGGTTGCTGTATGTAACA
AGCAAACTGATTTTATCATCTTCAATTATTATTAGCCTTCTTAGTTATTT
TTCTTTTCTGATTCAGGTTGGGCTTCAAGCAGAACTTTCGTATGCTAGGA
GTCTTGCTCGCTTTGCTGCAACGCTTGGACCTGTTGCATGGAAAGTTGCA
TCCCGCAGGATTGAGCAAGCACTGCCTGTTGGCTGTAAGTTTGGTTGTGG
GTGGGTCGGAGAGTATGAACCACTTCCAACACCGGTATTAACCTTCGAGA
CTCGTGCTCCTAAGGAATCAGCCCTTTTCACAAAGTTGCAGCATGCTGCT
GATGTTCATCCTCGAAAGGATGATGCTACTCATAGGACGACCCCGGTTCC
TGCAACTGATGTTCGAAAGGATGTTGGAACTTATAGGACCCCAGTTCCTG
CTAAGCCACATCCTCTTGATGTCCCCGTTTCTGAATCGAAATCCTCTTCA
TTTTGTTCCGCAAATGGGTCAACATCAGAAGGGAGGCCATCTTTGTTTAC
TCCACCAGCTATGCCATCTGTTCCACCTATTAGAAGAGATGAGTCCAGCA
ATGCTGCCGCTGTCGCTGCTCGTGCATGGATGTCTATAGGAGCTGGAGCC
TTTAAGGAAGCAAATGAAAACTTTGGCACTTCGAAAGGAAAAATATCCGC
AGATTCGTTATACAACCCGGCTAGGGAACTTCATCCACAAGCTCCACAAG
TTCGAGGGCAATTCCCTCTTTCTGCGGGGATGCATTTTCAACCTCAGCCA
GAGAAGAATAATTTTCCCCTCCATGGTTTCCCACCGCAACATGTTCGCAT
GATGAATGAAGCTCAGTTCCAAAACCGACCCATGGTTTTCCCTCAATTCG
TGGCGACCGACTTGTCTCGGTTCCAAGTTCAGCCTCATTGGCAAGGTCTT
AGCCCTCGAGCACAGCCGAGGCAGAAGCAGGATTCACTTCCTCCCGATCT
TAATATCGGGTTCCAATCTCCAGGGTCACCGGTGAAACAATCGTCAGGTG
TTTTGGTTGATTCCCAGCAGCCAGATCTGGCTTTGCAGCTTTGA

Coding sequence (CDS) from alignment at At_04_GB713:1758964..1763557+

>genemark-At_04_GB713-gene-1.68_NSF_v1 ID=genemark-At_04_GB713-gene-1.68_NSF_v1; Name=genemark-At_04_GB713-gene-1.68; organism=Gossypium hirsutum; type=CDS; length=2337bp; location=Sequence derived from: At_04_GB713:1758964..1763557+ (Gossypium hirsutum
ATGGGGCAGATCGTGAAGAGGAAGAAGAAAGGGAGGCCATCGAAGGCGGA
TCTGGCTAAAAGGGGAAGCTCGCCGGCAGCAGCGACGGAATTGGAGCTGC
GGCGGAGTCACCGGCGGAGAAATGTGAGGTATAACATCGATTATGATGAT
TACCTGGACGAAGACTTCGAGGAAGAAGACGAGGAAGAAGAGAGGAGGAG
AGAGAAGAAGCTTAAGCTTATTCTTAAACTTAATCAAGGTCTAGAAGCTG
AACCGCCTTCTCCTCCTGTTTCTTTACCGCCGAGCCGTGGCCGAGGTGTT
GTTTCGTCGTCAGCCGCGCGTGGGAGGCGAACGGCGAAGGAGGAAGTGGA
GGAGGAAGAAGAAGATGAAGATGAGGAAGAGGAAGAAGAGGAAAGTGAGA
GAAGGAAGAGAAAGATTAAAAAGAGAAGAATCAACGTCAGTGATGGAGTT
GATGATGAAGACGAAGAAGAAGAAGAAGACCGACAAGTTGATGATGATGA
AGATGATGATGACGATGGCCGTGTTGATGTGGATGCCGAGATGAGAGGGA
GAAAAGGGGAATCCAAAGGGCAGAACTCGGTTCCAGGGACGCCATCCGAT
CCTCCATCAGCGGTTCCATTACCTGATAAGAAGATATTGGAATTGATTCT
TGATAAACTTCAGAAGAAAGACACGTATGGTGTATATGCGGAACCCGTTG
ATCCTGAGGAGCTTCCTGATTACCATGATGTGATTGAGCATCCGATGGAC
TTTGCCACGGTGAGGAAGAAGTTGGCAAATGGATCTTATTCGACACTGGA
ACAATTTGAGAGTGATGTCTTCTTAATATGCTCAAACGCAATGCAATACA
ATGCGCCAGATACAGTATACCATAAACAGGCAAGGTCCATTCAAGAGCTG
GCCATGAAAAAGTTTGAGAAGTTAAGGATTGATGTAGACCGGTCTGAGAA
AGATAGCAAGATTGAACAGAAAACAAAATCAAACTTCTTAGCAAAGAAGC
AAACCAGAAAACCTTTATACCTTACAACACAGGAACCTGTTGGTTCTGAT
TTCTCTTCAGGGGCCATTCTTGCCACTTCTGGAGATATCCTGAACACTTC
CATCGCTATCCAAGCTAATGCTTGTGGGAGGCCTAGCCATACTGATGTAC
TCGTAGATGGTAACTCATCTGTGCCTGATTATAATCGAGAGAAAACTGAA
GAACTATCGTCAGGGAAGGGTCTTCTTTCTAAATTTGGGAGGAGGACAAC
TGCACTTGATGATAATCGTCGTGCAACATATAACATATCTAATCAACCGG
TGGTTAGATCGGATTCGATATTTACGACCTTTGAGGCTGAAATCAAGCAG
CTGGTTGCTGTTGGGCTTCAAGCAGAACTTTCGTATGCTAGGAGTCTTGC
TCGCTTTGCTGCAACGCTTGGACCTGTTGCATGGAAAGTTGCATCCCGCA
GGATTGAGCAAGCACTGCCTGTTGGCTGTAAGTTTGGTTGTGGGTGGGTC
GGAGAGTATGAACCACTTCCAACACCGGTATTAACCTTCGAGACTCGTGC
TCCTAAGGAATCAGCCCTTTTCACAAAGTTGCAGCATGCTGCTGATGTTC
ATCCTCGAAAGGATGATGCTACTCATAGGACGACCCCGGTTCCTGCAACT
GATGTTCGAAAGGATGTTGGAACTTATAGGACCCCAGTTCCTGCTAAGCC
ACATCCTCTTGATGTCCCCGTTTCTGAATCGAAATCCTCTTCATTTTGTT
CCGCAAATGGGTCAACATCAGAAGGGAGGCCATCTTTGTTTACTCCACCA
GCTATGCCATCTGTTCCACCTATTAGAAGAGATGAGTCCAGCAATGCTGC
CGCTGTCGCTGCTCGTGCATGGATGTCTATAGGAGCTGGAGCCTTTAAGG
AAGCAAATGAAAACTTTGGCACTTCGAAAGGAAAAATATCCGCAGATTCG
TTATACAACCCGGCTAGGGAACTTCATCCACAAGCTCCACAAGTTCGAGG
GCAATTCCCTCTTTCTGCGGGGATGCATTTTCAACCTCAGCCAGAGAAGA
ATAATTTTCCCCTCCATGGTTTCCCACCGCAACATGTTCGCATGATGAAT
GAAGCTCAGTTCCAAAACCGACCCATGGTTTTCCCTCAATTCGTGGCGAC
CGACTTGTCTCGGTTCCAAGTTCAGCCTCATTGGCAAGGTCTTAGCCCTC
GAGCACAGCCGAGGCAGAAGCAGGATTCACTTCCTCCCGATCTTAATATC
GGGTTCCAATCTCCAGGGTCACCGGTGAAACAATCGTCAGGTGTTTTGGT
TGATTCCCAGCAGCCAGATCTGGCTTTGCAGCTTTGA

Search form

genemark-At_04_GB713-gene-1.68