Palmeri x K-101, F2 (2007) | Cottongen

Map Overview


Name	Palmeri x K-101, F2 (2007)
Species	Gossypium hirsutum x barbadense
Population type	F2
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	Palmeri (unknown ID)
Paternal parent	AZK 101
Population size	57
Number of loci	2636
Number of QTL	329
Number of linkage groups	26
Publication	[view all]
Contact	Paterson, Andrew H.

Stock

Name

Type

Details

Palmeri x K-101, F2

population

Alias:	PK-F2
Description:	genetic mapping
Population size:	57
Secondary id:	cdbpop_000030
Pedigree:	Palmeri / AZK 101

Contact

Name

Details

Paterson, Andrew H.

First name:	Andrew
Last name:	Paterson
Title:	Director
Institution:	Univ. GA, Plant Genome Mapping Laboratory
Address:	111 Riverbend Road, Rm 228, Athens, GA 30602
Country:	United States
Email:	paterson@uga.edu
Last update:	19-Feb-2007

Publication


Year	Publications
1994	Reinisch A, Dong J, Brubaker C, Stelly D, Wendel J, Paterson A. A detailed RFLP map of cotton, Gossypium hirsutum X Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome. Genetics. 1994 Nov; 138(3):829-847.
2004	Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, Trolinder NL, Wendel JF, Wilkins TA, Williams-Coplin TD, Wing RA, Wright RJ, Zhao X, Zhu L, Paterson AH. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics. 2004 Jan; 166(1):389-417.
2005	Rong J, Pierce G, Waghmare V, Rogers C, Desai A, Chee P, May O, Gannaway J, Wendel J, Wilkins T. Genetic mapping and comparative analysis of seven mutants related to seed fiber development in cotton. Theoretical and applied genetics. 2005; 111(6):1137-1146.

Map Loci

This map contains 2,636 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Palmeri x K-101, F2 (2007).chr26	Unig24C07	Unig24C07	marker_locus	138.9 cM
Palmeri x K-101, F2 (2007).chr26	Gate1CB02	Gate1CB02	marker_locus	140.7 cM
Palmeri x K-101, F2 (2007).chr26	pVNC093	pVNC093	marker_locus	145.9 cM
Palmeri x K-101, F2 (2007).chr26	A1685	A1685b	marker_locus	145.9 cM
Palmeri x K-101, F2 (2007).chr26	G1005	G1005	marker_locus	145.9 cM
Palmeri x K-101, F2 (2007).chr26	pAR03C01	PAR03C01	marker_locus	147 cM
Palmeri x K-101, F2 (2007).chr26	Gate4AH02	Gate4AH02	marker_locus	148.9 cM
Palmeri x K-101, F2 (2007).chr26	pAR0764	pAR764b	marker_locus	148.9 cM
Palmeri x K-101, F2 (2007).chr26	G1045	G1045c	marker_locus	154.4 cM
Palmeri x K-101, F2 (2007).chr26	Gate4CF12	Gate4CF12a	marker_locus	156.9 cM
Palmeri x K-101, F2 (2007).chr26	pAR0177	pAR177b	marker_locus	157.4 cM
Palmeri x K-101, F2 (2007).chr26	M16-041	M16_041	marker_locus	164.1 cM

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Map QTL

This map contains 329 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Palmeri x K-101, F2 (2007).chr25	qOP.PK-F2_ch25	QTL	71 cM	80.7 cM	-
Palmeri x K-101, F2 (2007).chr06	qOP.PK-F2_ch06	QTL	60.2 cM	74.3 cM	-
Palmeri x K-101, F2 (2007).chr07	qOP.PK-F2_ch07	QTL	26.5 cM	54.3 cM	-
Palmeri x K-101, F2 (2007).chr08/lgA02	qOP.PK-F2_ch08	QTL	31.1 cM	50.5 cM	-

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