g.barbadense_cottongen_reftransV1_0097368, g.barbadense_cottongen_reftransV1_0097368 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.237e-65 Identity = 112/216 (51.85%), Postives = 164/216 (75.93%), Query Frame = 3 Query: 138 VTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKE--KVEDLDFKELSTMTEGYSGSDLKVV 779 V FADI D K++LQE+V+LP RP+LF G L P RG+LLFGPPG GKTMLAKA+A E+ A+F N+S +++TSK+ GE EK VRALF++A ++ P+IIF+DEVDS+L +R R GEH+A R++K EF+ +DG+ + +R+LV+ ATNRP +LD+A++RRF +R+ V LP+ E+R ++L+ LL+K+ + + + +LS +TEGYSGSD+ + Sbjct: 323 VKFADIAGQDLAKQALQEIVILPSIRPELFTG-LRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCER-REGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVALPNEETRLVLLKNLLSKQGNPLSEKELTQLSRLTEGYSGSDITAL 536
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy Swiss-Prot
Match: YJNA_SCHPO (Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC24B10.10c PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 6.665e-64 Identity = 118/235 (50.21%), Postives = 160/235 (68.09%), Query Frame = 3 Query: 84 NEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLF--NGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVE-DLDFKELSTMTEGYSGSDLKVV 779 NE+E+ + +++ +EI V+F DIG MD+ L + V+ PL+ P++F +GGLL +G+LL+GPPG GKTMLAKA+A ++ A+FINVS+ +T KWFGE K V ALFTLA K+ PTIIF+DE+D+ L QR R +HEAM +IK EFM+ WDGLL+ R+LVL ATNRP D+DEAI RR + + LP+ E R IL L K +E + D+ + T G SGS +K V Sbjct: 68 NEYEQIVASQLVLPSEIDVSFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQRQRT-DHEAMAQIKAEFMSMWDGLLS-GQSRVLVLGATNRPADIDEAIRRRMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIKEV 300
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.380e-63 Identity = 112/217 (51.61%), Postives = 161/217 (74.19%), Query Frame = 3 Query: 135 GVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKE--KVEDLDFKELSTMTEGYSGSDLKVV 779 V F DI + K++LQE+V+LP RP+LF G L P RG+LLFGPPG GKTMLAKA+A E+ A+F N+S +++TSK+ GE EK VRALF +A ++ P+IIF+DEVDS+L +R R GEH+A R++K EF+ +DG+ + +RILV+ ATNRP +LD+A++RRF +R+ V LP+ E+R I+L+ LL+K+ + + +L+ MT+GYSGSDL + Sbjct: 335 AVKFDDIAGQELAKQALQEIVILPSLRPELFTG-LRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCER-REGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGYSGSDLTAL 549
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 1.493e-63 Identity = 135/374 (36.10%), Postives = 203/374 (54.28%), Query Frame = 3 Query: 6 TEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGG-LLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVED-LDFKELSTMTEGYSGSDLKVVFFYLTAFTINLYLTVIN*WPKKKHYWKQNLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTA--LRPLNMED-------MRQAKNQVNLFNDPLNM 1094 T+K S KK E E E+E I ++ I VT+ D+ +D+I +Q+ V+LP ++ LF+G LL+P +G+LL+GPPG GKT++AKA A +G FIN+ ST+T KW+GE +K A+F+LA K+ P IIF+DE+DS L R+ + +HEA +K +FM+ WDGL T +++V+ ATNRP D+D AI+RR VGLP+ RE ILR +L+ E + + ++ KE+++ +EGYSGSDLK LC AA VR+ ++++++K + A + + EEE V + LRP+ D MR++K Q DP N+ Sbjct: 47 TQKQKSQAKKRAEQLMKQIGVEGVSLTEYEMNIATLLVDPRSIKVTWRDVAGLDEIISEMQDTVILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSM-DHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILRRMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLK------------------------------ELCRDAAMYRVRDYVRKQQMK--------------QIAQQFQLDEEEEHVDSRQLRPVTQLDLLFGLDKMRESK-QATATTDPANL 374
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 8.259e-62 Identity = 112/216 (51.85%), Postives = 164/216 (75.93%), Query Frame = 3 Query: 138 VTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKE--KVEDLDFKELSTMTEGYSGSDLKVV 779 V FADI D K++LQE+V+LP RP+LF G L P RG+LLFGPPG GKTMLAKA+A E+ A+F N+S +++TSK+ GE EK VRALF++A ++ P+IIF+DEVDS+L +R R GEH+A R++K EF+ +DG+ + +R+LV+ ATNRP +LD+A++RRF +R+ V LP+ E+R ++L+ LL+K+ + + + +LS +TEGYSGSD+ + Sbjct: 326 VKFADIAGQDLAKQALQEIVILPSIRPELFTG-LRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCER-REGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLLLLKNLLSKQGNPLNEKELTQLSRLTEGYSGSDITAL 539
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy Swiss-Prot
Match: ATAD1_MOUSE (ATPase family AAA domain-containing protein 1 OS=Mus musculus GN=Atad1 PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 8.409e-62 Identity = 105/232 (45.26%), Postives = 158/232 (68.10%), Query Frame = 3 Query: 84 NEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLF-NGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVE-DLDFKELSTMTEGYSGSDLK 773 +E+E I ++ + VT++DI +DD+ L++ V+LP+++ LF N LL+P +G+LL+GPPG GKT++AKA A EAG FIN+ ST+T KW+GE +K A+F+LA K+ P+IIF+DE+DS L R+ +HEA +K +FM+ WDGL T +++V+ ATNRP DLD AI+RR R + P+++ RE IL+ +L E V+ +D E++ T+G+SGSDLK Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSS-SDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLK 300
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy Swiss-Prot
Match: ATAD1_HUMAN (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 8.409e-62 Identity = 105/232 (45.26%), Postives = 158/232 (68.10%), Query Frame = 3 Query: 84 NEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLF-NGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVE-DLDFKELSTMTEGYSGSDLK 773 +E+E I ++ + VT++DI +DD+ L++ V+LP+++ LF N LL+P +G+LL+GPPG GKT++AKA A EAG FIN+ ST+T KW+GE +K A+F+LA K+ P+IIF+DE+DS L R+ +HEA +K +FM+ WDGL T +++V+ ATNRP DLD AI+RR R + P+++ RE IL+ +L E V+ +D E++ T+G+SGSDLK Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSS-SDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLK 300
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy Swiss-Prot
Match: ATAD1_BOVIN (ATPase family AAA domain-containing protein 1 OS=Bos taurus GN=ATAD1 PE=2 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 8.496e-62 Identity = 105/232 (45.26%), Postives = 158/232 (68.10%), Query Frame = 3 Query: 84 NEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLF-NGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVE-DLDFKELSTMTEGYSGSDLK 773 +E+E I ++ + VT++DI +DD+ L++ V+LP+++ LF N LL+P +G+LL+GPPG GKT++AKA A EAG FIN+ ST+T KW+GE +K A+F+LA K+ P+IIF+DE+DS L R+ +HEA +K +FM+ WDGL T +++V+ ATNRP DLD AI+RR R + P+++ RE IL+ +L E V+ +D E++ T+G+SGSDLK Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSS-SDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLK 300
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy Swiss-Prot
Match: ATAD1_RAT (ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 8.583e-62 Identity = 105/232 (45.26%), Postives = 158/232 (68.10%), Query Frame = 3 Query: 84 NEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLF-NGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVE-DLDFKELSTMTEGYSGSDLK 773 +E+E I ++ + VT++DI +DD+ L++ V+LP+++ LF N LL+P +G+LL+GPPG GKT++AKA A EAG FIN+ ST+T KW+GE +K A+F+LA K+ P+IIF+DE+DS L R+ +HEA +K +FM+ WDGL T +++V+ ATNRP DLD AI+RR R + P+++ RE IL+ +L E V+ +D E++ T+G+SGSDLK Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSS-SDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLK 300
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy Swiss-Prot
Match: SPAST_DANRE (Spastin OS=Danio rerio GN=spast PE=2 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 1.318e-61 Identity = 116/232 (50.00%), Postives = 168/232 (72.41%), Query Frame = 3 Query: 81 DNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEK--VEDLDFKELSTMTEGYSGSDL 770 D++ I E++ + + V F DI D K++LQE+V+LP RP+LF G L P RG+LLFGPPG GKTMLAKA+A E+ A+F N+S +T+TSK+ GE EK VRALF +A ++ P+IIF+DE+DS+L +R R GEH+A R++K EF+ +DG+ + ER+LV+ ATNRP +LDEA++RRF +RI V LP+ E+R +L+ LL+K + + + +L+ +T+GYSGSDL Sbjct: 274 DSKLASLILNEIVDSGSV-VRFDDIAGQDLAKQALQEIVILPALRPELFTG-LRAPARGLLLFGPPGNGKTMLAKAVAMESNATFFNISAATLTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSLLCER-REGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFAKRIYVALPTEETRLKLLKNLLSKHRNPLSQKELSQLARLTDGYSGSDL 502
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy TrEMBL
Match: A0A0D2UAN1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G272700 PE=3 SV=1) HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0 Identity = 323/355 (90.99%), Postives = 324/355 (91.27%), Query Frame = 3 Query: 3 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELSTMTEGYSGSDLKVVFFYLTAFTINLYLTVIN*WPKKKHYWKQNLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 1067 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFM HWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKEL+TMTEGYSGSDLK NLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV Sbjct: 477 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELATMTEGYSGSDLK------------------------------NLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 801 HSP 2 Score: 76.6406 bits (187), Expect = 3.073e-11 Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 1375 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 1485 VAASFASEGSVMAELKQWN+LYGEGGSRKK+QLTYFL Sbjct: 801 VAASFASEGSVMAELKQWNDLYGEGGSRKKEQLTYFL 837
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy TrEMBL
Match: A0A0D2T7X4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G272700 PE=3 SV=1) HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0 Identity = 323/355 (90.99%), Postives = 324/355 (91.27%), Query Frame = 3 Query: 3 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELSTMTEGYSGSDLKVVFFYLTAFTINLYLTVIN*WPKKKHYWKQNLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 1067 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFM HWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKEL+TMTEGYSGSDLK NLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV Sbjct: 476 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELATMTEGYSGSDLK------------------------------NLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 800 HSP 2 Score: 76.6406 bits (187), Expect = 3.018e-11 Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 1375 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 1485 VAASFASEGSVMAELKQWN+LYGEGGSRKK+QLTYFL Sbjct: 800 VAASFASEGSVMAELKQWNDLYGEGGSRKKEQLTYFL 836
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy TrEMBL
Match: A0A0D2TDT5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G272700 PE=3 SV=1) HSP 1 Score: 645.966 bits (1665), Expect = 0.000e+0 Identity = 323/355 (90.99%), Postives = 324/355 (91.27%), Query Frame = 3 Query: 3 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELSTMTEGYSGSDLKVVFFYLTAFTINLYLTVIN*WPKKKHYWKQNLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 1067 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFM HWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKEL+TMTEGYSGSDLK NLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV Sbjct: 357 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELATMTEGYSGSDLK------------------------------NLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 681 HSP 2 Score: 76.6406 bits (187), Expect = 2.635e-11 Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 1375 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 1485 VAASFASEGSVMAELKQWN+LYGEGGSRKK+QLTYFL Sbjct: 681 VAASFASEGSVMAELKQWNDLYGEGGSRKKEQLTYFL 717
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy TrEMBL
Match: A0A0B0MGH2_GOSAR (Spastin OS=Gossypium arboreum GN=F383_19058 PE=3 SV=1) HSP 1 Score: 644.04 bits (1660), Expect = 0.000e+0 Identity = 322/355 (90.70%), Postives = 323/355 (90.99%), Query Frame = 3 Query: 3 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELSTMTEGYSGSDLKVVFFYLTAFTINLYLTVIN*WPKKKHYWKQNLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 1067 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKEL+TMTEGYSGSDLK NLCITAAYRPVRELIKQER KDQERKRREEASKNSEDASDTKDENEEERV ALRPLNMEDMRQAKNQV Sbjct: 477 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELATMTEGYSGSDLK------------------------------NLCITAAYRPVRELIKQERFKDQERKRREEASKNSEDASDTKDENEEERVIALRPLNMEDMRQAKNQV 801 HSP 2 Score: 76.6406 bits (187), Expect = 3.126e-11 Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 1375 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 1485 VAASFASEGSVMAELKQWN+LYGEGGSRKK+QLTYFL Sbjct: 801 VAASFASEGSVMAELKQWNDLYGEGGSRKKEQLTYFL 837
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy TrEMBL
Match: A0A061G2D6_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theobroma cacao GN=TCM_015292 PE=3 SV=1) HSP 1 Score: 602.053 bits (1551), Expect = 0.000e+0 Identity = 297/355 (83.66%), Postives = 314/355 (88.45%), Query Frame = 3 Query: 3 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELSTMTEGYSGSDLKVVFFYLTAFTINLYLTVIN*WPKKKHYWKQNLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 1067 ETEKS+ KKDG+NPPA KAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMD+IKESLQELVMLPLRRPDLF GGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFM HWDGLLTK GERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESRE+IL+TLLAKEKVEDLDFKEL+TMTEGYSGSDLK NLC+TAAYRPVRELI+QERLKD E+K+REEA K+SEDAS+TK+E++EERV LRPLN+ED+RQAKNQV Sbjct: 492 ETEKSIPAAKKDGDNPPAPKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKTGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESRELILKTLLAKEKVEDLDFKELATMTEGYSGSDLK------------------------------NLCVTAAYRPVRELIQQERLKDLEKKKREEAGKSSEDASETKEEDKEERVITLRPLNLEDLRQAKNQV 816 HSP 2 Score: 75.8702 bits (185), Expect = 5.118e-11 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1375 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 1485 VAASFASEGS+M ELKQWN+LYGEGGSRKKQQLTYFL Sbjct: 816 VAASFASEGSIMGELKQWNDLYGEGGSRKKQQLTYFL 852
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy TrEMBL
Match: A0A067ESI4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003231mg PE=3 SV=1) HSP 1 Score: 582.793 bits (1501), Expect = 0.000e+0 Identity = 289/355 (81.41%), Postives = 309/355 (87.04%), Query Frame = 3 Query: 3 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELSTMTEGYSGSDLKVVFFYLTAFTINLYLTVIN*WPKKKHYWKQNLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 1067 E EKS+ VKKD ENPP AKAPE PPDNEFEKRIRPEVIPANEIGVTFADIGA+++IKESLQELVMLPLRRPDLF GGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKV+PTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFM HWDGLLT+ GERILVLAATNRPFDLDEAIIRRFERRIMVGLPS E+RE+IL+TLLAKEKVEDLDFKEL+ MTEGYSGSDLK NLC+TAAYRPVRELI++ER KD E+K+REEA+K+SEDAS+TK+E +EERV LRPLNMEDMRQAKNQV Sbjct: 477 EMEKSVPVVKKDSENPPPAKAPEFPPDNEFEKRIRPEVIPANEIGVTFADIGALNEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTRNGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILKTLLAKEKVEDLDFKELAAMTEGYSGSDLK------------------------------NLCVTAAYRPVRELIQEERKKDMEKKKREEAAKSSEDASETKEEAKEERVITLRPLNMEDMRQAKNQV 801 HSP 2 Score: 74.7146 bits (182), Expect = 1.189e-10 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1375 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 1485 VAASFASEGSVM ELKQWN+LYGEGGSRKK+QLTYFL Sbjct: 801 VAASFASEGSVMNELKQWNDLYGEGGSRKKEQLTYFL 837
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy TrEMBL
Match: V4U7R9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004310mg PE=3 SV=1) HSP 1 Score: 582.793 bits (1501), Expect = 0.000e+0 Identity = 289/355 (81.41%), Postives = 309/355 (87.04%), Query Frame = 3 Query: 3 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELSTMTEGYSGSDLKVVFFYLTAFTINLYLTVIN*WPKKKHYWKQNLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 1067 E EKS+ VKKD ENPP AKAPE PPDNEFEKRIRPEVIPANEIGVTFADIGA+++IKESLQELVMLPLRRPDLF GGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKV+PTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFM HWDGLLT+ GERILVLAATNRPFDLDEAIIRRFERRIMVGLPS E+RE+IL+TLLAKEKVEDLDFKEL+ MTEGYSGSDLK NLC+TAAYRPVRELI++ER KD E+K+REEA+K+SEDAS+TK+E +EERV LRPLNMEDMRQAKNQV Sbjct: 477 EMEKSVPVVKKDSENPPPAKAPEFPPDNEFEKRIRPEVIPANEIGVTFADIGALNEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTRNGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILKTLLAKEKVEDLDFKELAAMTEGYSGSDLK------------------------------NLCVTAAYRPVRELIQEERKKDMEKKKREEAAKSSEDASETKEEAKEERVITLRPLNMEDMRQAKNQV 801 HSP 2 Score: 74.7146 bits (182), Expect = 1.189e-10 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1 Query: 1375 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 1485 VAASFASEGSVM ELKQWN+LYGEGGSRKK+QLTYFL Sbjct: 801 VAASFASEGSVMNELKQWNDLYGEGGSRKKEQLTYFL 837
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy TrEMBL
Match: A0A0D2QJJ5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G013700 PE=3 SV=1) HSP 1 Score: 582.022 bits (1499), Expect = 0.000e+0 Identity = 286/355 (80.56%), Postives = 311/355 (87.61%), Query Frame = 3 Query: 3 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELSTMTEGYSGSDLKVVFFYLTAFTINLYLTVIN*WPKKKHYWKQNLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 1067 E +KS+S KKDGENPPA KA EVPPDNEFEKR+RPEVIPA EIGVTF DIGA+++ KESLQELVMLPLRRPDLFNGGLLKPC+GILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFM HWDGL+TKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESRE+ILRTLL+KEK E+LD+KEL+TMTEGYSGSDLK NLC+TAAYRPVRELI+QERLKDQE+KR+EEA K++ED +++K+E++EERV LRPLNMEDMRQAKNQV Sbjct: 459 ENDKSISAKKKDGENPPAPKA-EVPPDNEFEKRLRPEVIPAKEIGVTFNDIGALNETKESLQELVMLPLRRPDLFNGGLLKPCKGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREMILRTLLSKEKAENLDYKELATMTEGYSGSDLK------------------------------NLCVTAAYRPVRELIQQERLKDQEKKRQEEAGKSTEDVTESKEEHKEERVVTLRPLNMEDMRQAKNQV 782 HSP 2 Score: 79.337 bits (194), Expect = 4.864e-12 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 1375 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 1485 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL Sbjct: 782 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 818
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy TrEMBL
Match: A0A0B0PIU0_GOSAR (Spastin OS=Gossypium arboreum GN=F383_06514 PE=3 SV=1) HSP 1 Score: 578.941 bits (1491), Expect = 0.000e+0 Identity = 286/355 (80.56%), Postives = 311/355 (87.61%), Query Frame = 3 Query: 3 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELSTMTEGYSGSDLKVVFFYLTAFTINLYLTVIN*WPKKKHYWKQNLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 1067 E +KS+S KKDGENPPA KA EVPPDNEFEKRIRPEVIPA +IGVTF DIGA+++ KESLQELVMLPLRRPDLFNGGLLKPC+GILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFM HWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESRE+ILRTLL+KEK E+LD+KEL+TMTEGYSGSDLK NLC+TAAYRPVRELI+QERLKDQE+KR+EEA K++E+ +++K+E++EERV LRPLNMEDMRQAKNQV Sbjct: 459 ENDKSISAKKKDGENPPAPKA-EVPPDNEFEKRIRPEVIPAKDIGVTFNDIGALNETKESLQELVMLPLRRPDLFNGGLLKPCKGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREMILRTLLSKEKAENLDYKELATMTEGYSGSDLK------------------------------NLCVTAAYRPVRELIQQERLKDQEKKRQEEAGKSTENVTESKEEHKEERVITLRPLNMEDMRQAKNQV 782 HSP 2 Score: 79.337 bits (194), Expect = 5.123e-12 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 1375 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 1485 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL Sbjct: 782 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 818
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy TrEMBL
Match: A0A068UA01_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_15 OS=Coffea canephora GN=GSCOC_T00020063001 PE=3 SV=1) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 288/355 (81.13%), Postives = 306/355 (86.20%), Query Frame = 3 Query: 3 ETEKSLSGVKKDGENPPAAKAPEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDDIKESLQELVMLPLRRPDLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLLTKAGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREIILRTLLAKEKVEDLDFKELSTMTEGYSGSDLKVVFFYLTAFTINLYLTVIN*WPKKKHYWKQNLCITAAYRPVRELIKQERLKDQERKRREEASKNSEDASDTKDENEEERVTALRPLNMEDMRQAKNQV 1067 ETEKS+ KKDGENPPA KAP+VPPDNEFEKRIRPEVIPANEIGVTFADIGA+D+IKESLQELVMLPLRRPDLF GGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKV+PTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFM+HWDGLLTK GERILVLAATNRPFDLDEAIIRRFERRIMVGLPS+ESRE+ILRTLL+KEKVEDLDFKEL+ MTEGYSGSDLK NLCITAAYRPVRELI+QER KD E+K+R E ++SEDA D +E +EE V ALRPLNM D+RQAKNQV Sbjct: 482 ETEKSVP--KKDGENPPAPKAPDVPPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFQGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVESREMILRTLLSKEKVEDLDFKELAAMTEGYSGSDLK------------------------------NLCITAAYRPVRELIQQERKKDMEKKQRAEEGQSSEDADDRNEEAKEESVIALRPLNMGDIRQAKNQV 804 HSP 2 Score: 76.2554 bits (186), Expect = 4.023e-11 Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 1 Query: 1375 VAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL 1485 VAASFASEGS+MAELKQWN+LYGEGGSRKKQQL+YFL Sbjct: 804 VAASFASEGSIMAELKQWNDLYGEGGSRKKQQLSYFL 840 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097368 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097368 ID=g.barbadense_cottongen_reftransV1_0097368; Name=g.barbadense_cottongen_reftransV1_0097368; organism=Gossypium barbadense; type=contig; length=1957bpback to top |