g.barbadense_cottongen_reftransV1_0097269, g.barbadense_cottongen_reftransV1_0097269 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097269
Unique Nameg.barbadense_cottongen_reftransV1_0097269
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2091
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A0D2M751_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G056100 PE=4 SV=1)

HSP 1 Score: 1004.2 bits (2595), Expect = 0.000e+0
Identity = 508/531 (95.67%), Postives = 512/531 (96.42%), Query Frame = -3
Query:  356 MYRPKKLKQFYIIPALFLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTANNQSGPFVPLICDPYKHGDSQESCGDEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKKL 1948
            MYRPKKLKQFY IPALFLILSTLFSVSHGR+NENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLCACICCCCCHRNKPYGYSRLAYACSLIFLILFTIA VAGCALMFTGEGKFLASVNDVSHYIV QGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQIN+ALITITVFMLLL FLGF         C    VVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTANNQSGP VPLICDPYKHGDSQESCGDEVPLKNATEEW+KYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTL+NITTNHCPGLKKYSEWVY GLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKKL
Sbjct:    1 MYRPKKLKQFYNIPALFLILSTLFSVSHGRQNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLCACICCCCCHRNKPYGYSRLAYACSLIFLILFTIAAVAGCALMFTGEGKFLASVNDVSHYIVTQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINSALITITVFMLLLEFLGFCKLF-----CSQKLVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTANNQSGPLVPLICDPYKHGDSQESCGDEVPLKNATEEWEKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLRNITTNHCPGLKKYSEWVYCGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKKL 526          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A061G951_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_027328 PE=4 SV=1)

HSP 1 Score: 670.618 bits (1729), Expect = 0.000e+0
Identity = 341/560 (60.89%), Postives = 430/560 (76.79%), Query Frame = -3
Query:  356 KQQNQKKKRLTKMIIAMMYRPKKLKQFYIIPALFLILSTLFSVSHG---RKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTA--------NNQSGPFVPLICDPYKHGDSQESCGD-EVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKKL 1999
            K +  +++R+ KM       P +LK F++I ALFLI ST F +SHG   + ++  D  S G M LVK +++E  S N+S ILAK+ET R DPL+ F  Y GGW+I S HYLASV +SSAPFA++AIVWF+LFG+FL CACICCCCC RNKPYGYSRLAYA SLIFL+LFTIA + GC +M+ GEG+F  SVN  + YIVNQG+S+ +N+I + N+L SAKN+ LN +F+P DL  ++D  N LI++ G+LP + S  ITD I   L  +N ALI ITVF+LLLAFLGFLFSILGM+ CVY+FVVIGWI+ITLTF LCG+FLVFHNIV+DTC+AMDEW+Q+PMADSAM E+LPC+D  FG+ +  A + VTT+V+ LLN++I ++ANN+T         +NQSGP VP++C+PY    +Q+ CG+ EV L +A EEWKKYVC+VS  G CTT GRLTPDMY +M  AVN+S GL++Y  F+AG+ DC++++DT   I+ NHCPGL+KYSEWVY GLV ATGSVM SL  WVLYARERRHRKYTKRINKGYDESPLVGG+KL
Sbjct:   11 KNREIQRRRIMKM-------PVRLKPFFLIIALFLISSTFFPLSHGQDEKDDQPSDGNSQGAMSLVKERLDEAGSGNASFILAKKETYRKDPLDNFNYYTGGWNIASVHYLASVAFSSAPFAIIAIVWFVLFGLFLFCACICCCCCRRNKPYGYSRLAYALSLIFLVLFTIAAIVGCVIMYIGEGRFQGSVNGATKYIVNQGISVVNNLINVYNYLSSAKNIALNQQFLPPDLVSQIDNVNSLINATGNLPHVTSTHITDSILVFLNPVNMALIIITVFLLLLAFLGFLFSILGMQACVYLFVVIGWIIITLTFILCGIFLVFHNIVADTCVAMDEWVQNPMADSAMKELLPCWDRGFGQNVLNASRSVTTSVDSLLNEYIVLVANNDTLPPETVPLYHNQSGPLVPVLCNPYT---TQQGCGEGEVALSDAAEEWKKYVCEVSAAGICTTIGRLTPDMYNQMTSAVNVSYGLHNYGHFLAGIVDCTVLRDTFNGISQNHCPGLRKYSEWVYMGLVTATGSVMLSLILWVLYARERRHRKYTKRINKGYDESPLVGGRKL 560          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: D7T4Z4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00590 PE=4 SV=1)

HSP 1 Score: 435.261 bits (1118), Expect = 1.459e-140
Identity = 232/523 (44.36%), Postives = 328/523 (62.72%), Query Frame = -3
Query:  407 IIPALFLILSTLFSVSHG----------RKNENVDLQSDG--IMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESC-GDEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTK 1915
            ++P    I ST F+ SHG          R  E    + +G  +    +R + E    NSS+ILA + T R DP + F  Y GGW+I++ HY ASV Y++ PF ++  +WF+LFG+  L     C CC R +PYGYSR AYA SLI LILFTIA + GC +++TG+GKF  S      Y+V+Q  +  +N+  +  +L +AK + + + F+P +++  +D A   I++  +    K+Q  + +I+ LL  +  ALI +   MLLL FLGFLFSILG++  VY  V+IGWI++T TF LCG+FL+ HN+V+DTC+AMDEW+Q+P A +A+ ++LPC D A  +E     K VT  +  ++N  IT ++N N A        NQSGP VP++C+P+    +   C   EV L NAT+ W  YVCQVS  G CTTPGRLTP  Y +M  AVNIS GLY Y P++  + DC+ ++ T   I+ +HCP L+KYS+W+Y+GLV  + +VM SL FWV+YARERRHR YTK
Sbjct:   14 LLPFCIFIASTSFTFSHGSSQLHHPQPLRVQEVFGGRENGGLVPWKTRRSLAEGSGDNSSLILAAKRTHRKDPSDGFSYYTGGWNISNGHYWASVSYTAVPFFVLGGIWFVLFGL-CLSLICLCYCCCRREPYGYSRTAYALSLILLILFTIAAIIGCVVLYTGQGKFHGSTTSTLGYVVDQAETTSENLKNVSEYLSAAKRIGIGSSFLPANVQTNIDHAETKINASATTLDTKTQKNSKDIQDLLDAVRLALIVLAAVMLLLVFLGFLFSILGLQCLVYFLVIIGWILVTSTFILCGIFLLLHNVVADTCVAMDEWVQNPTARTALDDILPCVDNATAQETLLRTKDVTYQLVTVVNTVITNVSNINFAPNFVPLYFNQSGPLVPVLCNPFNADLTARQCSAGEVDLDNATQVWSNYVCQVSASGICTTPGRLTPSYYNQMAAAVNISYGLYHYGPYLVDLQDCTFVRQTFTVISDDHCPELRKYSKWIYTGLVMVSVAVMMSLIFWVIYARERRHRVYTK 535          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A078CZL6_BRANA (BnaC09g08450D protein OS=Brassica napus GN=BnaC09g08450D PE=4 SV=1)

HSP 1 Score: 431.795 bits (1109), Expect = 1.886e-139
Identity = 226/516 (43.80%), Postives = 328/516 (63.57%), Query Frame = -3
Query:  377 FLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1900
            FL+++T  S++   + E   ++ +    + +R M E +  NSS+ILA   T+R DP   F  Y GGW+I++ HY  SV Y++APF ++A VWF++FG+ L   C+C CCC R +PYGYSR+AYA SLI LI FTIA + GC  ++TG+GKF AS  D   Y+V Q     +N+  + ++L +AK V + +  +P D+   +D     I+S  +   +++ +  D I+ +L  +  ALI I   ML LAF+GFL SI G++  VY  V++GWI++T TF LCGLFL+ HN+V DTC+AMD+W+Q+P A +A+ ++LPC D A   E     K VT  + ++++ F+  +AN N          NQSGP +PL+C+P+    S   C   EV L NATE WK Y C+    G C+TPGRLTP+ YT+M  AVN+S GLY Y PF+A +  C+ ++ T  +I  +HCPGL++Y++W+Y GLV  + +VM SL FWV+YARERRHR YTK  N  + E+P
Sbjct:   15 FLLVATGISIA---EKEAASVEEEWGTSVKERFMAEEKGENSSLILAANRTKRKDPTENFNIYTGGWNISNTHYWTSVAYTAAPFFVIAGVWFVIFGLSLSLICLCYCCCAR-QPYGYSRVAYALSLILLISFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTAENLRNVSDYLNAAKKVDVQSIVLPGDVLSSIDNIQGKINSSATTLSVQTMENQDRIQDVLDNMRLALIIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFVLCGLFLLLHNVVGDTCVAMDQWVQNPKAHTALDDILPCVDNATATETLSQTKLVTYQLVEIVDNFMNTIANKNFPPQARPLYYNQSGPLMPLLCNPFNADLSDHLCKPGEVHLNNATEMWKSYTCEYITTGTCSTPGRLTPNHYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLRRYTQWIYVGLVLVSTAVMLSLVFWVVYARERRHRVYTKDYNAMHSEAP 526          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: R0I948_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10016344mg PE=4 SV=1)

HSP 1 Score: 431.024 bits (1107), Expect = 3.462e-139
Identity = 228/525 (43.43%), Postives = 327/525 (62.29%), Query Frame = -3
Query:  365 IIPALFLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGG 1915
            ++ +L L+ +T      GR  E     +     +++R + E  + NSS+ILA ++T+R DP + FK Y GGW+I++ HY  SVGY++APF ++A VWF+ FG+ L   C+C CCC R +PYGYSR+AYA SLI LI FTIA + GC  ++TG+GKF AS  D   Y+V+Q     +N+  + ++L +AK V +   F+P D+   +D     I+S  +   +K+ +  D+I+ +L  +  AL+ I   ML LAF+GFL SI G++  VY  V++GWI++T TF LCG FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A   E     K VT  + +LL+  I  +AN N          NQSGP +PL+C+P+    S + C   EV L NATE W+ + CQ+   G C+T GRLTP +Y +M   VN+S GLY Y PF+A +  C  ++ T  +I  +HCPGLK+Y++W+Y GLV  +  VM SL FWV+YARERRHR YTK  N  + E P   G
Sbjct:   18 VLSSLLLVAATGVGNEEGRGVEEWIRTTS----VIERVIAEEAAVNSSLILAAKKTKRKDPQDNFKLYTGGWNISNSHYWTSVGYTAAPFIIIAGVWFVFFGLSLSLICLCYCCCAR-QPYGYSRIAYALSLILLIAFTIAAIIGCVFLYTGQGKFHASTTDTLDYVVSQANLTSENLRNVSDYLNAAKKVDVQATFLPQDVLSSIDNIQGKINSSATTLSVKTMENQDKIQNVLDNMRLALVIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFILCGAFLLLHNVVGDTCVAMDQWVQHPTAHTALDDILPCVDNATARETLTRSKLVTYQLVNLLDNAIRNMANRNLPPQMRPLYYNQSGPLMPLLCNPFNADLSDKQCQPGEVHLNNATEVWRSFTCQIVTPGTCSTQGRLTPKLYDQMAAGVNVSYGLYKYGPFLADLQGCDFVRSTFTDIERDHCPGLKRYTKWIYVGLVLVSAGVMLSLVFWVIYARERRHRVYTKDYNAMHSEDPRSKG 537          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: M4F7Z0_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra037201 PE=4 SV=1)

HSP 1 Score: 430.639 bits (1106), Expect = 4.747e-139
Identity = 227/522 (43.49%), Postives = 329/522 (63.03%), Query Frame = -3
Query:  359 FLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKK 1900
            FL+++T  S++   + E   ++ +    + +R M E +  NSS+ILA   T+R DP   F  Y GGW+I++ HY  SV Y++ PF ++A VWF++FG+ L   C+C CCC R +PYGYSR+AYA SLI LILFTIA + GC  ++TG+GKF AS  D   Y+V Q     +N+  + ++L +AK V + +  +P D+   +D     I+S  +   +++ +  D I+ +L  +  ALI I   ML LAF+GFL SI G++  VY  V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A   E     K VT  + ++++ F+  +AN N          NQSGP +PL+C+P+    S   C   EV L NATE WK Y C+    G C+TPGRLTPD YT+M  AVN+S GLY Y PF+A +  C+ ++ T  +I  +HCPGL++Y++W+Y GLV  + +VM SL FWV+YARERRHR YTK  N  + E+P   G +
Sbjct:   15 FLLVATGISIA---EKEAASVEEEWGTSVKERFMAEEKGENSSLILAANRTKRKDPTENFNIYTGGWNISNTHYWTSVAYTATPFFVIAGVWFVVFGLSLSLICLCYCCCAR-QPYGYSRVAYALSLILLILFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTAENLRNVSDYLNAAKKVDVQSIVLPGDVLSSIDNIQGKINSSATTLSVQTMENQDRIQDVLDNMRLALIIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFVLCGVFLLLHNVVGDTCVAMDQWVQHPKAHTALDDILPCVDNATATETLSQTKLVTYQLVEIVDNFMNTIANKNFPPQARPLYYNQSGPLMPLLCNPFNADLSDHLCKPGEVHLSNATEVWKNYTCKYITPGICSTPGRLTPDHYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLRRYTQWIYVGLVLVSTAVMLSLVFWVVYARERRHRVYTKDYNAMHSEAPRDKGPQ 532          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A0D3BDK1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 429.483 bits (1103), Expect = 1.451e-138
Identity = 221/492 (44.92%), Postives = 314/492 (63.82%), Query Frame = -3
Query:  377 GIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1828
            G   +  R M E    NSS+ILA + T+R DP   FK Y GGW+I+S HY+ SV Y++ PFA++A VWF+ FG+ L   C C CCC R +PYGYSR+AYA SLI LI FTIA + GC  ++TG+GKF AS  D   Y+V Q     +N+  + ++L +A+ V + +  +P D+  +++   + I+S  +   +K+ +  D+I+ +L  +  ALI I   ML LAF+GFL SI G++  VY  V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A   E     K VT  + +LL+  I  + N N          NQSGP +PL+C+P+    S   C   EV L NATE WK Y CQ+   G C+T GR+TP +YT+M  AVN+S GLY Y PF+A +  C+ ++ T  +I  +HCPGLK+Y++W+Y GL+  + +VM SL FWV+Y+RERRHR YTK  N  + E+P
Sbjct:   35 GTTSVKGRFMAEESGENSSLILAAKRTKRKDPTEHFKLYTGGWNISSSHYIFSVAYTALPFAVIAGVWFVFFGLSLSLICFCYCCCAR-QPYGYSRIAYALSLILLISFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTSENLRNVSDYLNAAEKVDVQSLVLPGDVLTKINDIQRKINSSATTLSVKTMENQDKIQSVLNNMRLALILIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFILCGVFLILHNVVGDTCVAMDQWVQHPTAHTALDDILPCVDNATARETLTQSKLVTYQLVNLLDSAINTMTNRNFPPQARPFYYNQSGPLMPLLCNPFNADLSDHQCQPGEVHLSNATEVWKNYTCQIITVGTCSTQGRMTPKLYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLKRYTQWIYVGLMLVSTAVMLSLVFWVIYSRERRHRVYTKDYNATHSEAP 525          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: M1B9S6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400015625 PE=4 SV=1)

HSP 1 Score: 429.483 bits (1103), Expect = 1.470e-138
Identity = 225/499 (45.09%), Postives = 330/499 (66.13%), Query Frame = -3
Query:  404 SVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKR 1876
            S+S   +NEN  L S G  RL+    E+    NSS+ILA + T R DPLN FK Y GGW+I+++HY ASV +++APF ++A++WF++F + LL  C+C CCC R  PYGYSR+AYA SLI LILFTI  V GC +++ G+GKF +S  +   Y+V+Q  +  D++  +  +L +AK + ++   +P  ++ ++D+    I+S  +    K++D  D+I  L++ +  ALI ++  MLLL FLGF+ SI GM+  VY+ V+ GWI++T T  LCG+FLV HN+ +DTC+AM++W+Q P+A +A+ ++LPC D A  +E     K VT+ + D++NQ IT ++NNN +        NQSGP +P++C+P+    +  SC   EV L NAT+ W  YVCQVS  G C+T GRLTP +Y +M  AVN+S GLY Y PF+  + DC  ++ T  +I + +CPGL++YS+WVY GLV    +V+ SL FWV+Y RERRHR YTK 
Sbjct:   39 SISGEIRNENDVLVSWGTKRLLT---EDEPPLNSSLILAAKRTYRKDPLNNFKRYTGGWNISNRHYWASVAFTAAPFFVVALIWFVIFALCLLFICLCYCCCRR-VPYGYSRIAYALSLILLILFTITAVVGCIILYIGQGKFHSSTVNTLDYVVHQANTTADSLRNVSGYLAAAKLIAVDQVLLPGSVQTDIDRIQTKINSSANTLASKTEDNKDDIAGLVESVRLALIILSAIMLLLTFLGFVLSIFGMQAFVYILVIFGWILVTGTLILCGIFLVLHNVTADTCVAMNQWVQHPLAHTALDDILPCVDNATAQETLTKSKEVTSKLVDVVNQVITNISNNNFSPSFRPLYYNQSGPKLPILCNPFYSDLTDRSCSPGEVDLSNATKVWDNYVCQVSPSGTCSTTGRLTPVIYGQMAAAVNVSFGLYHYGPFLVDLEDCDFVRQTFGDIYSIYCPGLQRYSKWVYIGLVMVGLAVLLSLTFWVIYGRERRHRVYTKE 533          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A078HHK0_BRANA (BnaA09g08220D protein OS=Brassica napus GN=BnaA09g08220D PE=4 SV=1)

HSP 1 Score: 429.098 bits (1102), Expect = 1.546e-138
Identity = 226/522 (43.30%), Postives = 329/522 (63.03%), Query Frame = -3
Query:  359 FLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKK 1900
            FL+++T  S++   + E   ++ +    + +R M E +  NSS+ILA   T+R DP   F  Y GGW+I++ HY  SV Y++ PF ++A VWF++FG+ L   C+C CCC R +PYGYSR+AYA SLI LILFTIA + GC  ++TG+GKF AS  D   Y+V Q     +N+  + ++L +AK V + +  +P D+   +D     I+S  +   +++ +  D I+ +L  +  ALI I   ML LAF+GFL SI G++  VY  V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A   E     K VT  + ++++ F+  +AN N          NQSGP +PL+C+P+    S   C   EV L NATE WK Y C+    G C+TPGRLTP+ YT+M  AVN+S GLY Y PF+A +  C+ ++ T  +I  +HCPGL++Y++W+Y GLV  + +VM SL FWV+YARERRHR YTK  N  + E+P   G +
Sbjct:   15 FLLVATGISIA---EKEAASVEEEWGTSVKERFMAEEKGENSSLILAANRTKRKDPTENFNIYTGGWNISNTHYWTSVAYTATPFFVIAGVWFVVFGLSLSLICLCYCCCAR-QPYGYSRVAYALSLILLILFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTAENLRNVSDYLNAAKKVDVQSIVLPGDVLSSIDNIQGKINSSATTLSVQTMENQDRIQDVLDNMRLALIIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFVLCGVFLLLHNVVGDTCVAMDQWVQHPKAHTALDDILPCVDNATATETLSQTKLVTYQLVEIVDNFMNTIANKNFPPQARPLYYNQSGPLMPLLCNPFNADLSDHLCKPGEVHLSNATEVWKNYTCEYITPGICSTPGRLTPNHYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLRRYTQWIYVGLVLVSTAVMLSLVFWVVYARERRHRVYTKDYNAMHSEAPRDKGPQ 532          
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: M5VUR6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003792mg PE=4 SV=1)

HSP 1 Score: 428.713 bits (1101), Expect = 4.270e-138
Identity = 220/477 (46.12%), Postives = 320/477 (67.09%), Query Frame = -3
Query:  404 KRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKR 1810
            +R + E   +NSS+ILA++ T R DPL+ FK Y GGW+I++ HY ASVG+++APF ++A VWF+LFG+ L   C+C CCC R +PYGYSR AYA SLIFLILFT+A + GC +++TG+GKF +S  +   Y+V+Q  +  +N+  +  +L +AK + ++  F+P D++  +D     I+S  +    K++  +  I+  L  +  ALI +   ML LAFLGFLFSILGM+  VY  V++GW+++  TF LCG+FL+ HN+V+D C++MDEW+ +P A +A+ +VLPC D A  +E     K  T  +  ++N+ IT ++N N          NQSGP +P++C+P+    +   C   E  L+NATE WKKYVC+VS  G CTTPGRLTP  Y++M  AVN+S GLY Y PF+  + DC+ ++D   +++  +CPGL+KYS W+Y GLV  + +VM SL FWV+YARERRHR YTK+
Sbjct:   59 RRSLAEGTVQNSSLILAEKRTYRKDPLDGFKKYTGGWNISNDHYWASVGFTAAPFFVIAGVWFVLFGLSLSFICLCYCCCPR-EPYGYSRTAYALSLIFLILFTLAAIVGCIVLYTGQGKFHSSTTNTLKYVVSQADTTVENLRNLSGYLGAAKRIGVDAVFLPADVQSNIDNVLTKINSASNTLSDKTEKNSKRIQDGLDSMRLALIIVAAVMLFLAFLGFLFSILGMQVLVYFLVIVGWVLVAGTFILCGVFLLLHNVVADACVSMDEWVTNPTAHTALDDVLPCVDNATAQETSSRTKETTYRLATVVNRVITNVSNKNYPPIAGPLYFNQSGPLLPVLCNPFNSDLTDRQCSPGEAKLQNATEVWKKYVCEVSAAGICTTPGRLTPTFYSQMEAAVNVSYGLYRYGPFLVDLQDCTFVRDAFTDVSNRNCPGLRKYSGWIYIGLVMVSTAVMLSLIFWVIYARERRHRVYTKQ 534          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2M751_GOSRA0.000e+095.67Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061G951_THECC0.000e+060.89Uncharacterized protein OS=Theobroma cacao GN=TCM_... [more]
D7T4Z4_VITVI1.459e-14044.36Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A078CZL6_BRANA1.886e-13943.80BnaC09g08450D protein OS=Brassica napus GN=BnaC09g... [more]
R0I948_9BRAS3.462e-13943.43Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
M4F7Z0_BRARP4.747e-13943.49Uncharacterized protein OS=Brassica rapa subsp. pe... [more]
A0A0D3BDK1_BRAOL1.451e-13844.92Uncharacterized protein OS=Brassica oleracea var. ... [more]
M1B9S6_SOLTU1.470e-13845.09Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
A0A078HHK0_BRANA1.546e-13843.30BnaA09g08220D protein OS=Brassica napus GN=BnaA09g... [more]
M5VUR6_PRUPE4.270e-13846.12Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31414:SF1TRANSMEMBRANE PROTEIN DDB_G0292058coord: 51..529
NoneNo IPR availablePANTHERPTHR31414FAMILY NOT NAMEDcoord: 51..529
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 257..278
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 279..284
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..256
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 309..485
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 510..536
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 285..308
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 486..509
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 486..508
NoneNo IPR availableTMHMMTMhelixcoord: 104..126
NoneNo IPR availableTMHMMTMhelixcoord: 286..308
NoneNo IPR availableTMHMMTMhelixcoord: 257..279
NoneNo IPR availableTMHMMTMhelixcoord: 146..168

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097269 ID=g.barbadense_cottongen_reftransV1_0097269; Name=g.barbadense_cottongen_reftransV1_0097269; organism=Gossypium barbadense; type=contig; length=2091bp
GGGGATAATGTTGTAACTTTACCACTACTAGATTAAAAGGAAATATGGGT
TTTCCGGAGGCTTGTCGCACGGTAGGGTACATTCCAAAATCCAAATGCAC
GGTGCAATACAATTGTTATGACTTCTCCCATTTTCTCATTGGATTTGCGG
CTGAATCTAAAGAAACTCTCGTTAGTTTAAGCAAAATGACATGTACCACA
TATTTGATGTCATTCTAAAACTCTTTCGTTCTACTGTATTTTCCATTTCT
TCTTATACCAAAGAAAGGGTTGCACATCTAGAGGTAGACATAAACGGAAA
ATATATTTTTTCCAGCCATTGATGATGTGAAAAATGTTTAAGAAAGGTTT
CGTTACAGCTTCTTCCCTCCAACAAGAGGCGACTCATCGTATCCTTTATT
GATCCTTTTCGTATACTTCCGATGCCGCCTTTCTCTAGCGTATAACACCC
AAAAGAACAACGAAAACATCACAGAACCAGTGGCGGCGACTAAGCCACTG
TAAACCCATTCGCTGTATTTCTTCAGACCTGGACAATGGTTTGTGGTTAT
ATTTTTCAAAGTGTCTTGGATTATGCTGCAGTCAGCAACGCCAGCAATGA
AGGGATTATAGTCATATAACCCGTTGCTTATATTCACTGCTTTAATCATC
TCAGTATACATGTCTGGTGTTAGACGGCCTGGTGTGGTGCAATCACCATC
TTCTGAAACTTGACATACATATTTCTTCCACTCCTCTGTTGCATTTTTCA
AGGGAACTTCATCACCGCAACTCTCCTGAGAGTCGCCATGTTTGTATGGG
TCGCAGATTAAAGGCACGAATGGACCGGATTGATTGTTTGCGGTATTGTT
GTTGGCTAAAACGGTAATGAATTGGTTCAGTAAATCGTTAACATTTGTGG
TTACTCCTTTCCCTGCTTCCTTGATCTCTTCGCCGAATGCCATGTCAAAA
CAAGGGAGAACTTCCCCCATTGCTGAATCGGCCATCGGGTCTTGAATCCA
TTCGTCCATTGCAATGCATGTATCTGACACTATGTTGTGAAAAACGAGAA
ACAGGCCGCACAAGAAAAATGTGAGTGTGATCACAATCCACCCAATGACC
ACGAACATATACACACAAGTTTTCATGCCAAGAATGGAAAACAAGAATCC
AAGAAATGCCAAGAGGAGCATGAAAACAGTAATAGTGATAAGAGCAGTGT
TGATTTGTTTGAGTAACTTTCTTATTTCATCTGTGATGTCTTGCGATTTG
ATACGAGGAAGGCTTCCTACGGAGTCGATTAACTTGTTGGCCTTGTCAAC
CTCGCCTTTAAGATCATCGGGTACAAACTTATTGTTCAGAACAACATTCT
TTGCAGATATAAGAAAATTTTGTATGCCTATAATATTATCGTAGATGCTT
AATCCTTGATTCACAATGTAATGTGATACATCATTTACACTGGCCAGGAA
CTTTCCTTCTCCAGTGAACATTAAAGCACATCCAGCAACAGTCGCAATGG
TGAAAAGTATGAGAAAGATGAGAGAACATGCATAAGCAAGTCGAGAATAG
CCGTAGGGCTTGTTGCGGTGGCAACAGCAGCAACAGATGCAAGCACAAAG
TAGAAAAATACCGAACAACATAAACCAGACTATAGCCATGAGGGCGAAAG
GAGCTGAACTATAACCAACAGAAGCAAGGTAATGTTTGCTTGTTATATCC
CATCCTCCTTTGTAATCTTTAAATTTATTCAAGGGATCAGGCCTCTCTGT
CTCTTCCTTAGCTAATATAATTGACGAATTTCTTGATTCAGTTTCTTCCA
TTTTTCGCTTCACCAACCTCATAATTCCATCGGATTGCAAATCAACATTC
TCATTTTTTCTACCATGAGAAACAGAAAACAATGTTGATAAAATAAGAAA
CAAAGCTGGTATAATATAAAATTGCTTCAATTTTTTAGGCCTATACATCA
TCGCTATTATCATTTTAGTTAACCTTTTTTTTTTTTGGTTCTGTTGTTTA
GTCTCTAGGTTCGATCTTTCCCTGGAGAAACAAAGAAGGGTTTAGGCATT
GCATTTCATTTAACGTGAACATTCTGTATGTTAAATGCATG
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