g.barbadense_cottongen_reftransV1_0097269, g.barbadense_cottongen_reftransV1_0097269 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A0D2M751_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G056100 PE=4 SV=1) HSP 1 Score: 1004.2 bits (2595), Expect = 0.000e+0 Identity = 508/531 (95.67%), Postives = 512/531 (96.42%), Query Frame = -3 Query: 356 MYRPKKLKQFYIIPALFLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTANNQSGPFVPLICDPYKHGDSQESCGDEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKKL 1948 MYRPKKLKQFY IPALFLILSTLFSVSHGR+NENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLCACICCCCCHRNKPYGYSRLAYACSLIFLILFTIA VAGCALMFTGEGKFLASVNDVSHYIV QGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQIN+ALITITVFMLLL FLGF C VVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTANNQSGP VPLICDPYKHGDSQESCGDEVPLKNATEEW+KYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTL+NITTNHCPGLKKYSEWVY GLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKKL Sbjct: 1 MYRPKKLKQFYNIPALFLILSTLFSVSHGRQNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLCACICCCCCHRNKPYGYSRLAYACSLIFLILFTIAAVAGCALMFTGEGKFLASVNDVSHYIVTQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINSALITITVFMLLLEFLGFCKLF-----CSQKLVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTANNQSGPLVPLICDPYKHGDSQESCGDEVPLKNATEEWEKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLRNITTNHCPGLKKYSEWVYCGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKKL 526
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A061G951_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_027328 PE=4 SV=1) HSP 1 Score: 670.618 bits (1729), Expect = 0.000e+0 Identity = 341/560 (60.89%), Postives = 430/560 (76.79%), Query Frame = -3 Query: 356 KQQNQKKKRLTKMIIAMMYRPKKLKQFYIIPALFLILSTLFSVSHG---RKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTA--------NNQSGPFVPLICDPYKHGDSQESCGD-EVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKKL 1999 K + +++R+ KM P +LK F++I ALFLI ST F +SHG + ++ D S G M LVK +++E S N+S ILAK+ET R DPL+ F Y GGW+I S HYLASV +SSAPFA++AIVWF+LFG+FL CACICCCCC RNKPYGYSRLAYA SLIFL+LFTIA + GC +M+ GEG+F SVN + YIVNQG+S+ +N+I + N+L SAKN+ LN +F+P DL ++D N LI++ G+LP + S ITD I L +N ALI ITVF+LLLAFLGFLFSILGM+ CVY+FVVIGWI+ITLTF LCG+FLVFHNIV+DTC+AMDEW+Q+PMADSAM E+LPC+D FG+ + A + VTT+V+ LLN++I ++ANN+T +NQSGP VP++C+PY +Q+ CG+ EV L +A EEWKKYVC+VS G CTT GRLTPDMY +M AVN+S GL++Y F+AG+ DC++++DT I+ NHCPGL+KYSEWVY GLV ATGSVM SL WVLYARERRHRKYTKRINKGYDESPLVGG+KL Sbjct: 11 KNREIQRRRIMKM-------PVRLKPFFLIIALFLISSTFFPLSHGQDEKDDQPSDGNSQGAMSLVKERLDEAGSGNASFILAKKETYRKDPLDNFNYYTGGWNIASVHYLASVAFSSAPFAIIAIVWFVLFGLFLFCACICCCCCRRNKPYGYSRLAYALSLIFLVLFTIAAIVGCVIMYIGEGRFQGSVNGATKYIVNQGISVVNNLINVYNYLSSAKNIALNQQFLPPDLVSQIDNVNSLINATGNLPHVTSTHITDSILVFLNPVNMALIIITVFLLLLAFLGFLFSILGMQACVYLFVVIGWIIITLTFILCGIFLVFHNIVADTCVAMDEWVQNPMADSAMKELLPCWDRGFGQNVLNASRSVTTSVDSLLNEYIVLVANNDTLPPETVPLYHNQSGPLVPVLCNPYT---TQQGCGEGEVALSDAAEEWKKYVCEVSAAGICTTIGRLTPDMYNQMTSAVNVSYGLHNYGHFLAGIVDCTVLRDTFNGISQNHCPGLRKYSEWVYMGLVTATGSVMLSLILWVLYARERRHRKYTKRINKGYDESPLVGGRKL 560
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: D7T4Z4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00590 PE=4 SV=1) HSP 1 Score: 435.261 bits (1118), Expect = 1.459e-140 Identity = 232/523 (44.36%), Postives = 328/523 (62.72%), Query Frame = -3 Query: 407 IIPALFLILSTLFSVSHG----------RKNENVDLQSDG--IMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESC-GDEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTK 1915 ++P I ST F+ SHG R E + +G + +R + E NSS+ILA + T R DP + F Y GGW+I++ HY ASV Y++ PF ++ +WF+LFG+ L C CC R +PYGYSR AYA SLI LILFTIA + GC +++TG+GKF S Y+V+Q + +N+ + +L +AK + + + F+P +++ +D A I++ + K+Q + +I+ LL + ALI + MLLL FLGFLFSILG++ VY V+IGWI++T TF LCG+FL+ HN+V+DTC+AMDEW+Q+P A +A+ ++LPC D A +E K VT + ++N IT ++N N A NQSGP VP++C+P+ + C EV L NAT+ W YVCQVS G CTTPGRLTP Y +M AVNIS GLY Y P++ + DC+ ++ T I+ +HCP L+KYS+W+Y+GLV + +VM SL FWV+YARERRHR YTK Sbjct: 14 LLPFCIFIASTSFTFSHGSSQLHHPQPLRVQEVFGGRENGGLVPWKTRRSLAEGSGDNSSLILAAKRTHRKDPSDGFSYYTGGWNISNGHYWASVSYTAVPFFVLGGIWFVLFGL-CLSLICLCYCCCRREPYGYSRTAYALSLILLILFTIAAIIGCVVLYTGQGKFHGSTTSTLGYVVDQAETTSENLKNVSEYLSAAKRIGIGSSFLPANVQTNIDHAETKINASATTLDTKTQKNSKDIQDLLDAVRLALIVLAAVMLLLVFLGFLFSILGLQCLVYFLVIIGWILVTSTFILCGIFLLLHNVVADTCVAMDEWVQNPTARTALDDILPCVDNATAQETLLRTKDVTYQLVTVVNTVITNVSNINFAPNFVPLYFNQSGPLVPVLCNPFNADLTARQCSAGEVDLDNATQVWSNYVCQVSASGICTTPGRLTPSYYNQMAAAVNISYGLYHYGPYLVDLQDCTFVRQTFTVISDDHCPELRKYSKWIYTGLVMVSVAVMMSLIFWVIYARERRHRVYTK 535
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A078CZL6_BRANA (BnaC09g08450D protein OS=Brassica napus GN=BnaC09g08450D PE=4 SV=1) HSP 1 Score: 431.795 bits (1109), Expect = 1.886e-139 Identity = 226/516 (43.80%), Postives = 328/516 (63.57%), Query Frame = -3 Query: 377 FLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1900 FL+++T S++ + E ++ + + +R M E + NSS+ILA T+R DP F Y GGW+I++ HY SV Y++APF ++A VWF++FG+ L C+C CCC R +PYGYSR+AYA SLI LI FTIA + GC ++TG+GKF AS D Y+V Q +N+ + ++L +AK V + + +P D+ +D I+S + +++ + D I+ +L + ALI I ML LAF+GFL SI G++ VY V++GWI++T TF LCGLFL+ HN+V DTC+AMD+W+Q+P A +A+ ++LPC D A E K VT + ++++ F+ +AN N NQSGP +PL+C+P+ S C EV L NATE WK Y C+ G C+TPGRLTP+ YT+M AVN+S GLY Y PF+A + C+ ++ T +I +HCPGL++Y++W+Y GLV + +VM SL FWV+YARERRHR YTK N + E+P Sbjct: 15 FLLVATGISIA---EKEAASVEEEWGTSVKERFMAEEKGENSSLILAANRTKRKDPTENFNIYTGGWNISNTHYWTSVAYTAAPFFVIAGVWFVIFGLSLSLICLCYCCCAR-QPYGYSRVAYALSLILLISFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTAENLRNVSDYLNAAKKVDVQSIVLPGDVLSSIDNIQGKINSSATTLSVQTMENQDRIQDVLDNMRLALIIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFVLCGLFLLLHNVVGDTCVAMDQWVQNPKAHTALDDILPCVDNATATETLSQTKLVTYQLVEIVDNFMNTIANKNFPPQARPLYYNQSGPLMPLLCNPFNADLSDHLCKPGEVHLNNATEMWKSYTCEYITTGTCSTPGRLTPNHYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLRRYTQWIYVGLVLVSTAVMLSLVFWVVYARERRHRVYTKDYNAMHSEAP 526
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: R0I948_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10016344mg PE=4 SV=1) HSP 1 Score: 431.024 bits (1107), Expect = 3.462e-139 Identity = 228/525 (43.43%), Postives = 327/525 (62.29%), Query Frame = -3 Query: 365 IIPALFLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGG 1915 ++ +L L+ +T GR E + +++R + E + NSS+ILA ++T+R DP + FK Y GGW+I++ HY SVGY++APF ++A VWF+ FG+ L C+C CCC R +PYGYSR+AYA SLI LI FTIA + GC ++TG+GKF AS D Y+V+Q +N+ + ++L +AK V + F+P D+ +D I+S + +K+ + D+I+ +L + AL+ I ML LAF+GFL SI G++ VY V++GWI++T TF LCG FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A E K VT + +LL+ I +AN N NQSGP +PL+C+P+ S + C EV L NATE W+ + CQ+ G C+T GRLTP +Y +M VN+S GLY Y PF+A + C ++ T +I +HCPGLK+Y++W+Y GLV + VM SL FWV+YARERRHR YTK N + E P G Sbjct: 18 VLSSLLLVAATGVGNEEGRGVEEWIRTTS----VIERVIAEEAAVNSSLILAAKKTKRKDPQDNFKLYTGGWNISNSHYWTSVGYTAAPFIIIAGVWFVFFGLSLSLICLCYCCCAR-QPYGYSRIAYALSLILLIAFTIAAIIGCVFLYTGQGKFHASTTDTLDYVVSQANLTSENLRNVSDYLNAAKKVDVQATFLPQDVLSSIDNIQGKINSSATTLSVKTMENQDKIQNVLDNMRLALVIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFILCGAFLLLHNVVGDTCVAMDQWVQHPTAHTALDDILPCVDNATARETLTRSKLVTYQLVNLLDNAIRNMANRNLPPQMRPLYYNQSGPLMPLLCNPFNADLSDKQCQPGEVHLNNATEVWRSFTCQIVTPGTCSTQGRLTPKLYDQMAAGVNVSYGLYKYGPFLADLQGCDFVRSTFTDIERDHCPGLKRYTKWIYVGLVLVSAGVMLSLVFWVIYARERRHRVYTKDYNAMHSEDPRSKG 537
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: M4F7Z0_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra037201 PE=4 SV=1) HSP 1 Score: 430.639 bits (1106), Expect = 4.747e-139 Identity = 227/522 (43.49%), Postives = 329/522 (63.03%), Query Frame = -3 Query: 359 FLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKK 1900 FL+++T S++ + E ++ + + +R M E + NSS+ILA T+R DP F Y GGW+I++ HY SV Y++ PF ++A VWF++FG+ L C+C CCC R +PYGYSR+AYA SLI LILFTIA + GC ++TG+GKF AS D Y+V Q +N+ + ++L +AK V + + +P D+ +D I+S + +++ + D I+ +L + ALI I ML LAF+GFL SI G++ VY V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A E K VT + ++++ F+ +AN N NQSGP +PL+C+P+ S C EV L NATE WK Y C+ G C+TPGRLTPD YT+M AVN+S GLY Y PF+A + C+ ++ T +I +HCPGL++Y++W+Y GLV + +VM SL FWV+YARERRHR YTK N + E+P G + Sbjct: 15 FLLVATGISIA---EKEAASVEEEWGTSVKERFMAEEKGENSSLILAANRTKRKDPTENFNIYTGGWNISNTHYWTSVAYTATPFFVIAGVWFVVFGLSLSLICLCYCCCAR-QPYGYSRVAYALSLILLILFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTAENLRNVSDYLNAAKKVDVQSIVLPGDVLSSIDNIQGKINSSATTLSVQTMENQDRIQDVLDNMRLALIIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFVLCGVFLLLHNVVGDTCVAMDQWVQHPKAHTALDDILPCVDNATATETLSQTKLVTYQLVEIVDNFMNTIANKNFPPQARPLYYNQSGPLMPLLCNPFNADLSDHLCKPGEVHLSNATEVWKNYTCKYITPGICSTPGRLTPDHYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLRRYTQWIYVGLVLVSTAVMLSLVFWVVYARERRHRVYTKDYNAMHSEAPRDKGPQ 532
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A0D3BDK1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 429.483 bits (1103), Expect = 1.451e-138 Identity = 221/492 (44.92%), Postives = 314/492 (63.82%), Query Frame = -3 Query: 377 GIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESP 1828 G + R M E NSS+ILA + T+R DP FK Y GGW+I+S HY+ SV Y++ PFA++A VWF+ FG+ L C C CCC R +PYGYSR+AYA SLI LI FTIA + GC ++TG+GKF AS D Y+V Q +N+ + ++L +A+ V + + +P D+ +++ + I+S + +K+ + D+I+ +L + ALI I ML LAF+GFL SI G++ VY V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A E K VT + +LL+ I + N N NQSGP +PL+C+P+ S C EV L NATE WK Y CQ+ G C+T GR+TP +YT+M AVN+S GLY Y PF+A + C+ ++ T +I +HCPGLK+Y++W+Y GL+ + +VM SL FWV+Y+RERRHR YTK N + E+P Sbjct: 35 GTTSVKGRFMAEESGENSSLILAAKRTKRKDPTEHFKLYTGGWNISSSHYIFSVAYTALPFAVIAGVWFVFFGLSLSLICFCYCCCAR-QPYGYSRIAYALSLILLISFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTSENLRNVSDYLNAAEKVDVQSLVLPGDVLTKINDIQRKINSSATTLSVKTMENQDKIQSVLNNMRLALILIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFILCGVFLILHNVVGDTCVAMDQWVQHPTAHTALDDILPCVDNATARETLTQSKLVTYQLVNLLDSAINTMTNRNFPPQARPFYYNQSGPLMPLLCNPFNADLSDHQCQPGEVHLSNATEVWKNYTCQIITVGTCSTQGRMTPKLYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLKRYTQWIYVGLMLVSTAVMLSLVFWVIYSRERRHRVYTKDYNATHSEAP 525
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: M1B9S6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400015625 PE=4 SV=1) HSP 1 Score: 429.483 bits (1103), Expect = 1.470e-138 Identity = 225/499 (45.09%), Postives = 330/499 (66.13%), Query Frame = -3 Query: 404 SVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKR 1876 S+S +NEN L S G RL+ E+ NSS+ILA + T R DPLN FK Y GGW+I+++HY ASV +++APF ++A++WF++F + LL C+C CCC R PYGYSR+AYA SLI LILFTI V GC +++ G+GKF +S + Y+V+Q + D++ + +L +AK + ++ +P ++ ++D+ I+S + K++D D+I L++ + ALI ++ MLLL FLGF+ SI GM+ VY+ V+ GWI++T T LCG+FLV HN+ +DTC+AM++W+Q P+A +A+ ++LPC D A +E K VT+ + D++NQ IT ++NNN + NQSGP +P++C+P+ + SC EV L NAT+ W YVCQVS G C+T GRLTP +Y +M AVN+S GLY Y PF+ + DC ++ T +I + +CPGL++YS+WVY GLV +V+ SL FWV+Y RERRHR YTK Sbjct: 39 SISGEIRNENDVLVSWGTKRLLT---EDEPPLNSSLILAAKRTYRKDPLNNFKRYTGGWNISNRHYWASVAFTAAPFFVVALIWFVIFALCLLFICLCYCCCRR-VPYGYSRIAYALSLILLILFTITAVVGCIILYIGQGKFHSSTVNTLDYVVHQANTTADSLRNVSGYLAAAKLIAVDQVLLPGSVQTDIDRIQTKINSSANTLASKTEDNKDDIAGLVESVRLALIILSAIMLLLTFLGFVLSIFGMQAFVYILVIFGWILVTGTLILCGIFLVLHNVTADTCVAMNQWVQHPLAHTALDDILPCVDNATAQETLTKSKEVTSKLVDVVNQVITNISNNNFSPSFRPLYYNQSGPKLPILCNPFYSDLTDRSCSPGEVDLSNATKVWDNYVCQVSPSGTCSTTGRLTPVIYGQMAAAVNVSFGLYHYGPFLVDLEDCDFVRQTFGDIYSIYCPGLQRYSKWVYIGLVMVGLAVLLSLTFWVIYGRERRHRVYTKE 533
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: A0A078HHK0_BRANA (BnaA09g08220D protein OS=Brassica napus GN=BnaA09g08220D PE=4 SV=1) HSP 1 Score: 429.098 bits (1102), Expect = 1.546e-138 Identity = 226/522 (43.30%), Postives = 329/522 (63.03%), Query Frame = -3 Query: 359 FLILSTLFSVSHGRKNENVDLQSDGIMRLVKRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKRINKGYDESPLVGGKK 1900 FL+++T S++ + E ++ + + +R M E + NSS+ILA T+R DP F Y GGW+I++ HY SV Y++ PF ++A VWF++FG+ L C+C CCC R +PYGYSR+AYA SLI LILFTIA + GC ++TG+GKF AS D Y+V Q +N+ + ++L +AK V + + +P D+ +D I+S + +++ + D I+ +L + ALI I ML LAF+GFL SI G++ VY V++GWI++T TF LCG+FL+ HN+V DTC+AMD+W+Q P A +A+ ++LPC D A E K VT + ++++ F+ +AN N NQSGP +PL+C+P+ S C EV L NATE WK Y C+ G C+TPGRLTP+ YT+M AVN+S GLY Y PF+A + C+ ++ T +I +HCPGL++Y++W+Y GLV + +VM SL FWV+YARERRHR YTK N + E+P G + Sbjct: 15 FLLVATGISIA---EKEAASVEEEWGTSVKERFMAEEKGENSSLILAANRTKRKDPTENFNIYTGGWNISNTHYWTSVAYTATPFFVIAGVWFVVFGLSLSLICLCYCCCAR-QPYGYSRVAYALSLILLILFTIAAIVGCVFLYTGQGKFHASTTDTLDYVVRQANFTAENLRNVSDYLNAAKKVDVQSIVLPGDVLSSIDNIQGKINSSATTLSVQTMENQDRIQDVLDNMRLALIIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTGTFVLCGVFLLLHNVVGDTCVAMDQWVQHPKAHTALDDILPCVDNATATETLSQTKLVTYQLVEIVDNFMNTIANKNFPPQARPLYYNQSGPLMPLLCNPFNADLSDHLCKPGEVHLSNATEVWKNYTCEYITPGICSTPGRLTPNHYTQMAAAVNVSYGLYKYGPFLADLRGCNFVRSTFTDIERDHCPGLRRYTQWIYVGLVLVSTAVMLSLVFWVVYARERRHRVYTKDYNAMHSEAPRDKGPQ 532
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Match: M5VUR6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003792mg PE=4 SV=1) HSP 1 Score: 428.713 bits (1101), Expect = 4.270e-138 Identity = 220/477 (46.12%), Postives = 320/477 (67.09%), Query Frame = -3 Query: 404 KRKMEETESRNSSIILAKEETERPDPLNKFKDYKGGWDITSKHYLASVGYSSAPFALMAIVWFMLFGIFLLXXXXXXXXCHRNKPYGYSRLAYACSLIFLILFTIATVAGCALMFTGEGKFLASVNDVSHYIVNQGLSIYDNIIGIQNFLISAKNVVLNNKFVPDDLKGEVDKANKLIDSVGSLPRIKSQDITDEIRKLLKQINTALITITVXXXXXXXXXXXXXXLGMKTCVYMFVVIGWIVITLTFFLCGLFLVFHNIVSDTCIAMDEWIQDPMADSAMGEVLPCFDMAFGEEIKEAGKGVTTNVNDLLNQFITVLANNNTAN-------NQSGPFVPLICDPYKHGDSQESCG-DEVPLKNATEEWKKYVCQVSEDGDCTTPGRLTPDMYTEMIKAVNISNGLYDYNPFIAGVADCSIIQDTLKNITTNHCPGLKKYSEWVYSGLVAATGSVMFSLFFWVLYARERRHRKYTKR 1810 +R + E +NSS+ILA++ T R DPL+ FK Y GGW+I++ HY ASVG+++APF ++A VWF+LFG+ L C+C CCC R +PYGYSR AYA SLIFLILFT+A + GC +++TG+GKF +S + Y+V+Q + +N+ + +L +AK + ++ F+P D++ +D I+S + K++ + I+ L + ALI + ML LAFLGFLFSILGM+ VY V++GW+++ TF LCG+FL+ HN+V+D C++MDEW+ +P A +A+ +VLPC D A +E K T + ++N+ IT ++N N NQSGP +P++C+P+ + C E L+NATE WKKYVC+VS G CTTPGRLTP Y++M AVN+S GLY Y PF+ + DC+ ++D +++ +CPGL+KYS W+Y GLV + +VM SL FWV+YARERRHR YTK+ Sbjct: 59 RRSLAEGTVQNSSLILAEKRTYRKDPLDGFKKYTGGWNISNDHYWASVGFTAAPFFVIAGVWFVLFGLSLSFICLCYCCCPR-EPYGYSRTAYALSLIFLILFTLAAIVGCIVLYTGQGKFHSSTTNTLKYVVSQADTTVENLRNLSGYLGAAKRIGVDAVFLPADVQSNIDNVLTKINSASNTLSDKTEKNSKRIQDGLDSMRLALIIVAAVMLFLAFLGFLFSILGMQVLVYFLVIVGWVLVAGTFILCGVFLLLHNVVADACVSMDEWVTNPTAHTALDDVLPCVDNATAQETSSRTKETTYRLATVVNRVITNVSNKNYPPIAGPLYFNQSGPLLPVLCNPFNSDLTDRQCSPGEAKLQNATEVWKKYVCEVSAAGICTTPGRLTPTFYSQMEAAVNVSYGLYRYGPFLVDLQDCTFVRDAFTDVSNRNCPGLRKYSGWIYIGLVMVSTAVMLSLIFWVIYARERRHRVYTKQ 534 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0097269 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097269 ID=g.barbadense_cottongen_reftransV1_0097269; Name=g.barbadense_cottongen_reftransV1_0097269; organism=Gossypium barbadense; type=contig; length=2091bpback to top |