g.barbadense_cottongen_reftransV1_0097259, g.barbadense_cottongen_reftransV1_0097259 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097259
Unique Nameg.barbadense_cottongen_reftransV1_0097259
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length4005
Homology
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy TrEMBL
Match: A0A0D2T6F8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G113400 PE=4 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 4.346e-95
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 3 
Query:   51 MEELRKLEQLHTTLTFMQSHNFVRSSTLDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERDYQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 515
            MEELRKLEQLHTTLTFMQSHNFV SSTLDSNRFIANL+LLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERDYQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES
Sbjct:    1 MEELRKLEQLHTTLTFMQSHNFVPSSTLDSNRFIANLILLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERDYQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 155

HSP 2 Score: 178.718 bits (452), Expect = 6.613e-46
Identity = 86/94 (91.49%), Postives = 87/94 (92.55%), Query Frame = 1 
Query:  943 YNMQLDGLNEKILSIPTEGDASLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKMEVDI 1224
            Y  QLDGLNEKILSIPTEGD SLAKEFEKMNYQCWA TFANMLEKDPFRPLLNVLELRGLL DRIREEFRSGEEYWALERKLC ALTHKME+ I
Sbjct:  156 YIYQLDGLNEKILSIPTEGDTSLAKEFEKMNYQCWAETFANMLEKDPFRPLLNVLELRGLLNDRIREEFRSGEEYWALERKLCRALTHKMEISI 249
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy TrEMBL
Match: A0A0B0PJ00_GOSAR (ATP synthase subunit b 2 OS=Gossypium arboreum GN=F383_02542 PE=4 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 1.229e-93
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 3 
Query:   51 MEELRKLEQLHTTLTFMQSHNFVRSSTLDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERDYQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 515
            MEELRKLEQLHTTLTFMQSHNFVRSS+LDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERDYQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIF+YFPVLAFTES
Sbjct:    1 MEELRKLEQLHTTLTFMQSHNFVRSSSLDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERDYQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFEYFPVLAFTES 155

HSP 2 Score: 188.734 bits (478), Expect = 5.569e-48
Identity = 89/94 (94.68%), Postives = 90/94 (95.74%), Query Frame = 1 
Query:  943 YNMQLDGLNEKILSIPTEGDASLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKMEVDI 1224
            Y  QLDGLNEKILSIPTEGD SLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKME+ I
Sbjct:  156 YIYQLDGLNEKILSIPTEGDTSLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKMEISI 249

HSP 3 Score: 77.0258 bits (188), Expect = 1.135e-25
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 2 
Query: 3257 IQAKNITDAEERYDNLLKTLDPQLSSKYQRRCEEAAKEG 3373
            + AKNITDAEERYDNLLKTLDPQLSSKYQRRCEEA KEG
Sbjct:  332 MLAKNITDAEERYDNLLKTLDPQLSSKYQRRCEEATKEG 370

HSP 4 Score: 70.0922 bits (170), Expect = 1.135e-25
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 1 
Query: 3457 SGGKVSGHPLGTWSIPPVIVNEDLYRSNCLNTE 3555
             GGKVSG+PLGTWSIPPVIVNEDLYRSNCLNTE
Sbjct:  369 EGGKVSGNPLGTWSIPPVIVNEDLYRSNCLNTE 401
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy TrEMBL
Match: A0A0D2RKP6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G113400 PE=4 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 1.738e-93
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 3 
Query:   51 MEELRKLEQLHTTLTFMQSHNFVRSSTLDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERDYQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 515
            MEELRKLEQLHTTLTFMQSHNFV SSTLDSNRFIANL+LLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERDYQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES
Sbjct:    1 MEELRKLEQLHTTLTFMQSHNFVPSSTLDSNRFIANLILLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERDYQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 155

HSP 2 Score: 178.718 bits (452), Expect = 1.346e-44
Identity = 86/94 (91.49%), Postives = 87/94 (92.55%), Query Frame = 1 
Query:  943 YNMQLDGLNEKILSIPTEGDASLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKMEVDI 1224
            Y  QLDGLNEKILSIPTEGD SLAKEFEKMNYQCWA TFANMLEKDPFRPLLNVLELRGLL DRIREEFRSGEEYWALERKLC ALTHKME+ I
Sbjct:  156 YIYQLDGLNEKILSIPTEGDTSLAKEFEKMNYQCWAETFANMLEKDPFRPLLNVLELRGLLNDRIREEFRSGEEYWALERKLCRALTHKMEISI 249

HSP 3 Score: 73.9442 bits (180), Expect = 3.313e-25
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 2 
Query: 3257 IQAKNITDAEERYDNLLKTLDPQLSSKYQRRCEEAAKEG 3373
            + AK ITDAEERYDNLLKTLDPQLSSKYQRRCEEA KEG
Sbjct:  329 MLAKYITDAEERYDNLLKTLDPQLSSKYQRRCEEATKEG 367

HSP 4 Score: 71.633 bits (174), Expect = 3.313e-25
Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = 1 
Query: 3457 SGGKVSGHPLGTWSIPPVIVNEDLYRSNCLNTE 3555
             GGK SGHPLGTWSIPPVIVNEDLYRSNCLNTE
Sbjct:  366 EGGKASGHPLGTWSIPPVIVNEDLYRSNCLNTE 398
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy TrEMBL
Match: A0A061DHW9_THECC (Uncharacterized protein isoform 5 OS=Theobroma cacao GN=TCM_001073 PE=4 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 3.605e-59
Identity = 123/159 (77.36%), Postives = 137/159 (86.16%), Query Frame = 3 
Query:   51 MEELRKLEQLHTTLTFMQSHNFVRSSTLDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERD----YQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 515
            MEELRKLEQL  T TFMQS +FV SS++DSNRF+ANL+LLLLQPCGELNLD K  LLSEY+PKISV+FLEEASQWV  ETDERD    Y E+N+P  K DC  LQINH++VAMVGLEAMERANSTLEDFCRSYFMFHG+DI SP +IFKYFPVL+FTES
Sbjct:    1 MEELRKLEQLQRTFTFMQSRSFVSSSSIDSNRFLANLILLLLQPCGELNLDNKCNLLSEYIPKISVTFLEEASQWVSLETDERDSQENYVELNNPPDKTDCRSLQINHKDVAMVGLEAMERANSTLEDFCRSYFMFHGIDITSPQVIFKYFPVLSFTES 159

HSP 2 Score: 122.094 bits (305), Expect = 1.647e-26
Identity = 63/91 (69.23%), Postives = 70/91 (76.92%), Query Frame = 1 
Query:  952 QLDGLNEKILSIPTEGDASLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKMEVDI 1224
            QLDGLNEKIL IP EG  +  KE EK  +Q WA    N+ EKDPFRPLLNVL+ RGLLT+RIREEF+SGE YWALERKLC AL  KME+ I
Sbjct:  163 QLDGLNEKILYIPMEGVTTPEKELEKEKFQGWA---MNVFEKDPFRPLLNVLKCRGLLTERIREEFKSGEVYWALERKLCSALMCKMEISI 250
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy TrEMBL
Match: A0A061DHS3_THECC (Uncharacterized protein isoform 4 OS=Theobroma cacao GN=TCM_001073 PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.453e-59
Identity = 123/159 (77.36%), Postives = 137/159 (86.16%), Query Frame = 3 
Query:   51 MEELRKLEQLHTTLTFMQSHNFVRSSTLDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERD----YQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 515
            MEELRKLEQL  T TFMQS +FV SS++DSNRF+ANL+LLLLQPCGELNLD K  LLSEY+PKISV+FLEEASQWV  ETDERD    Y E+N+P  K DC  LQINH++VAMVGLEAMERANSTLEDFCRSYFMFHG+DI SP +IFKYFPVL+FTES
Sbjct:    1 MEELRKLEQLQRTFTFMQSRSFVSSSSIDSNRFLANLILLLLQPCGELNLDNKCNLLSEYIPKISVTFLEEASQWVSLETDERDSQENYVELNNPPDKTDCRSLQINHKDVAMVGLEAMERANSTLEDFCRSYFMFHGIDITSPQVIFKYFPVLSFTES 159

HSP 2 Score: 122.094 bits (305), Expect = 2.658e-26
Identity = 63/91 (69.23%), Postives = 70/91 (76.92%), Query Frame = 1 
Query:  952 QLDGLNEKILSIPTEGDASLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKMEVDI 1224
            QLDGLNEKIL IP EG  +  KE EK  +Q WA    N+ EKDPFRPLLNVL+ RGLLT+RIREEF+SGE YWALERKLC AL  KME+ I
Sbjct:  163 QLDGLNEKILYIPMEGVTTPEKELEKEKFQGWA---MNVFEKDPFRPLLNVLKCRGLLTERIREEFKSGEVYWALERKLCSALMCKMEISI 250
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy TrEMBL
Match: A0A061DIG9_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_001073 PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.186e-58
Identity = 123/159 (77.36%), Postives = 137/159 (86.16%), Query Frame = 3 
Query:   51 MEELRKLEQLHTTLTFMQSHNFVRSSTLDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERD----YQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 515
            MEELRKLEQL  T TFMQS +FV SS++DSNRF+ANL+LLLLQPCGELNLD K  LLSEY+PKISV+FLEEASQWV  ETDERD    Y E+N+P  K DC  LQINH++VAMVGLEAMERANSTLEDFCRSYFMFHG+DI SP +IFKYFPVL+FTES
Sbjct:    1 MEELRKLEQLQRTFTFMQSRSFVSSSSIDSNRFLANLILLLLQPCGELNLDNKCNLLSEYIPKISVTFLEEASQWVSLETDERDSQENYVELNNPPDKTDCRSLQINHKDVAMVGLEAMERANSTLEDFCRSYFMFHGIDITSPQVIFKYFPVLSFTES 159

HSP 2 Score: 122.479 bits (306), Expect = 7.841e-26
Identity = 63/91 (69.23%), Postives = 70/91 (76.92%), Query Frame = 1 
Query:  952 QLDGLNEKILSIPTEGDASLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKMEVDI 1224
            QLDGLNEKIL IP EG  +  KE EK  +Q WA    N+ EKDPFRPLLNVL+ RGLLT+RIREEF+SGE YWALERKLC AL  KME+ I
Sbjct:  163 QLDGLNEKILYIPMEGVTTPEKELEKEKFQGWA---MNVFEKDPFRPLLNVLKCRGLLTERIREEFKSGEVYWALERKLCSALMCKMEISI 250

HSP 3 Score: 73.1738 bits (178), Expect = 1.571e-24
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 2 
Query: 3251 LTIQAKNITDAEERYDNLLKTLDPQLSSKYQRRCEEAAKEG 3373
            +  QAK ITD+EERYDNLLKTLDPQLSSKY+RRCEEA KEG
Sbjct:  337 VLFQAKYITDSEERYDNLLKTLDPQLSSKYRRRCEEATKEG 377

HSP 4 Score: 70.0922 bits (170), Expect = 1.571e-24
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 1 
Query: 3457 SGGKVSGHPLGTWSIPPVIVNEDLYRSNCLNTE 3555
             GGKVSGHPLGTWSIPP+IVNEDLYRSNCLNT+
Sbjct:  376 EGGKVSGHPLGTWSIPPLIVNEDLYRSNCLNTK 408
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy TrEMBL
Match: A0A061DJC4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_001073 PE=4 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.008e-57
Identity = 123/159 (77.36%), Postives = 137/159 (86.16%), Query Frame = 3 
Query:   51 MEELRKLEQLHTTLTFMQSHNFVRSSTLDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERD----YQEVNDPSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 515
            MEELRKLEQL  T TFMQS +FV SS++DSNRF+ANL+LLLLQPCGELNLD K  LLSEY+PKISV+FLEEASQWV  ETDERD    Y E+N+P  K DC  LQINH++VAMVGLEAMERANSTLEDFCRSYFMFHG+DI SP +IFKYFPVL+FTES
Sbjct:    1 MEELRKLEQLQRTFTFMQSRSFVSSSSIDSNRFLANLILLLLQPCGELNLDNKCNLLSEYIPKISVTFLEEASQWVSLETDERDSQENYVELNNPPDKTDCRSLQINHKDVAMVGLEAMERANSTLEDFCRSYFMFHGIDITSPQVIFKYFPVLSFTES 159

HSP 2 Score: 122.094 bits (305), Expect = 8.310e-26
Identity = 63/91 (69.23%), Postives = 70/91 (76.92%), Query Frame = 1 
Query:  952 QLDGLNEKILSIPTEGDASLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKMEVDI 1224
            QLDGLNEKIL IP EG  +  KE EK  +Q WA    N+ EKDPFRPLLNVL+ RGLLT+RIREEF+SGE YWALERKLC AL  KME+ I
Sbjct:  163 QLDGLNEKILYIPMEGVTTPEKELEKEKFQGWA---MNVFEKDPFRPLLNVLKCRGLLTERIREEFKSGEVYWALERKLCSALMCKMEISI 250

HSP 3 Score: 70.8626 bits (172), Expect = 9.083e-24
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 2 
Query: 3263 AKNITDAEERYDNLLKTLDPQLSSKYQRRCEEAAKEG 3373
            AK ITD+EERYDNLLKTLDPQLSSKY+RRCEEA KEG
Sbjct:  332 AKYITDSEERYDNLLKTLDPQLSSKYRRRCEEATKEG 368

HSP 4 Score: 70.0922 bits (170), Expect = 9.083e-24
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 1 
Query: 3457 SGGKVSGHPLGTWSIPPVIVNEDLYRSNCLNTE 3555
             GGKVSGHPLGTWSIPP+IVNEDLYRSNCLNT+
Sbjct:  367 EGGKVSGHPLGTWSIPPLIVNEDLYRSNCLNTK 399
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy TrEMBL
Match: M5W5C9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006607mg PE=4 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.370e-40
Identity = 88/159 (55.35%), Postives = 115/159 (72.33%), Query Frame = 3 
Query:   51 MEELRKLEQLHTTLTFMQSHNF-VRSSTLDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFET-DERDYQEVND--PSGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 515
            MEELRKLE++   LTF+QS      SS  D + F+  L+LLL+QPCGEL+L  K  L+SEY+PKIS +FL+EAS+W+  E  +ER  +       S K +   L  ++EE+AMVGL+AM+RANSTLEDFCRSYFMFHG+DI+ P  +F+Y PVL+FTES
Sbjct:    1 MEELRKLEEVQRMLTFVQSRGIPTTSSPDDCSCFLTKLILLLVQPCGELDLGKKCSLVSEYMPKISAAFLDEASKWLNGEGYEERSVENALQLACSHKPESSSLDNSYEEMAMVGLDAMQRANSTLEDFCRSYFMFHGMDINKPQSVFQYLPVLSFTES 159

HSP 2 Score: 84.3445 bits (207), Expect = 1.085e-13
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 1 
Query:  943 YNMQLDGLNEKILSIPTEGDASLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKMEVDI 1224
            Y  QLD LNEK L  P+  + ++ +   +   Q       NM + DPFRPL  +LE  GLLT RI++EF+SGE YWALERKLC AL +K E+ +
Sbjct:  160 YIYQLDRLNEKTLHAPS-NEMNMLERGSQTEGQWLISRCTNMFKSDPFRPLSCLLECHGLLTKRIQDEFKSGEGYWALERKLCYALINKTEISV 252
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy TrEMBL
Match: A0A0A0KXR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G026840 PE=4 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 7.888e-39
Identity = 88/159 (55.35%), Postives = 109/159 (68.55%), Query Frame = 3 
Query:   51 MEELRKLEQLHTTLTFMQSHNFVRSSTLDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERDYQEVN--DP--SGKKDCLPLQINHEEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 515
            MEELRKLEQ+HT +T M S     +S+  SNRFIAN +LLL+QPCGEL+ D KF L+SEY+PK S  FL + S  +  + D R  +  N   P    K D    Q    E+AMVGL+AM+RANSTLEDF RSYFMFHG+D + P  +FKYFP+L+FTES
Sbjct:    1 MEELRKLEQVHTLITLMDSRGIPITSSSSSNRFIANFLLLLVQPCGELDFDDKFDLVSEYMPKFSEEFLGDVSLLLG-DGDYRGKEMENTLQPYCDNKLDLGSSQNYCGEMAMVGLDAMQRANSTLEDFFRSYFMFHGMDANKPQSVFKYFPILSFTES 158

HSP 2 Score: 69.707 bits (169), Expect = 2.542e-9
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 1 
Query:  943 YNMQLDGLNEKILSIPTEGDASLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKMEVDI 1224
            Y  QLD LNEKI+     G  +   E ++ N +  +    + +  DP +PL+N+L+  GLLTDR+  E RSGEEYWALER LC AL    +V I
Sbjct:  159 YIYQLDTLNEKIVL----GGFAFG-ESQETNEK--STKILSAIRSDPLQPLINLLKSHGLLTDRLVHELRSGEEYWALERDLCGALASNGKVSI 245
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy TrEMBL
Match: A0A072V0G8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g087010 PE=4 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.065e-37
Identity = 76/162 (46.91%), Postives = 113/162 (69.75%), Query Frame = 3 
Query:   51 MEELRKLEQLHTTLTFMQSHNF-VRSSTLDSNRFIANLVLLLLQPCGELNLDMKFRLLSEYLPKISVSFLEEASQWVRFETDERDYQEVNDPSGKKDCLPLQINH------EEVAMVGLEAMERANSTLEDFCRSYFMFHGVDIDSPLMIFKYFPVLAFTES 515
            MEELRKLE++   ++FM SH   V +S    NRF+AN +L LL+PCG+L +D+K  L+SE +P++S  F+E+A Q+V  E +   +++  D +    C  ++ N+      E +AM+GL++M++ANSTLEDFCRSYFMFHG+D+  P  IFK+ P+L+FTES
Sbjct:    1 MEELRKLEKVQRMVSFMDSHGVSVSNSDHHCNRFLANFMLFLLEPCGDLAIDVKCCLISELMPRLSSPFVEDAYQYVVAEQESNGFEQNLDGNALHSCSQMKDNNLLHGYNENIAMIGLDSMQKANSTLEDFCRSYFMFHGLDVSKPQSIFKFLPILSFTES 162

HSP 2 Score: 77.0258 bits (188), Expect = 9.796e-12
Identity = 42/94 (44.68%), Postives = 54/94 (57.45%), Query Frame = 1 
Query:  943 YNMQLDGLNEKILSIPTEGDASLAKEFEKMNYQCWAGTFANMLEKDPFRPLLNVLELRGLLTDRIREEFRSGEEYWALERKLCCALTHKMEVDI 1224
            Y  QLD +NE +L  P   D    ++       C++         DPF PL+ + E RGLLT+RI EE R GEEYWALERKLC AL ++ E+ I
Sbjct:  163 YIYQLDKMNENLLQTPRRKDEKATQDL----VSCFS--------TDPFGPLVTIFEQRGLLTERITEELRHGEEYWALERKLCHALINEEEILI 244
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of g.barbadense_cottongen_reftransV1_0097259 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2T6F8_GOSRA4.346e-9598.71Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0B0PJ00_GOSAR1.229e-9398.71ATP synthase subunit b 2 OS=Gossypium arboreum GN=... [more]
A0A0D2RKP6_GOSRA1.738e-9398.71Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061DHW9_THECC3.605e-5977.36Uncharacterized protein isoform 5 OS=Theobroma cac... [more]
A0A061DHS3_THECC4.453e-5977.36Uncharacterized protein isoform 4 OS=Theobroma cac... [more]
A0A061DIG9_THECC8.186e-5877.36Uncharacterized protein isoform 2 OS=Theobroma cac... [more]
A0A061DJC4_THECC1.008e-5777.36Uncharacterized protein isoform 1 OS=Theobroma cac... [more]
M5W5C9_PRUPE2.370e-4055.35Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
A0A0A0KXR8_CUCSA7.888e-3955.35Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
A0A072V0G8_MEDTR1.065e-3746.91Uncharacterized protein OS=Medicago truncatula GN=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35754FAMILY NOT NAMEDcoord: 2..170

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097259 ID=g.barbadense_cottongen_reftransV1_0097259; Name=g.barbadense_cottongen_reftransV1_0097259; organism=Gossypium barbadense; type=contig; length=4005bp
AAGATTTGTAGCAGACTGAAATGTAGAGCAAAGATAGAGGAAAAGTAGAA
ATGGAGGAACTGAGGAAGCTTGAACAACTCCACACAACTCTTACATTTAT
GCAATCTCATAACTTCGTTCGCTCTTCAACTCTCGATTCAAATCGCTTCA
TCGCCAATCTCGTCCTTCTCTTATTACAACCATGCGGCGAACTCAATCTT
GACATGAAATTCCGTTTACTTTCTGAATATTTACCAAAAATTTCAGTCAG
CTTTCTGGAAGAAGCATCACAATGGGTTCGTTTTGAAACTGATGAAAGAG
ATTATCAAGAGGTTAATGATCCGTCAGGTAAGAAGGATTGCCTCCCATTG
CAGATAAACCACGAGGAGGTAGCAATGGTGGGACTGGAAGCAATGGAACG
AGCAAATTCTACACTTGAGGATTTTTGCAGATCTTATTTTATGTTTCATG
GAGTGGACATAGACAGCCCACTTATGATATTTAAATATTTCCCTGTTCTT
GCATTCACTGAAAGTTATATTTATCAGGTAATAATCGTTATCCAAAGAAA
TGTTGTTATATTTACAAGTAATCTTTACATTCAATGCAGGAATATTGCAT
AAATTTCAATATATTTGTTGGAGCTAGTCTTATCGCTTTCAATGCAATGG
TGTTGAGAAGTTGCAGTTGGAATTGGGCGAAATTTCTCTCTCTTGTAAAC
TTCCATTATGACAAATTAATTTTCTCTCCAAGAAGGAACGAGCCTTGCCT
TGGCTTCCATTCCTTCCATTCTTGTCTTTGCAAAGTAAAATTGTTTTACT
TCAGTGTAAAGGACATTCTAGAAGTTAGCGATGAATTCTCTTGTAACCTT
TGGAAACATTGCAACCACTAACTTTCAAGATCTCATACCATGGCTTCTTT
CTTCCTTTCTTCTTTCTTTCCTCAGTACTTTATTTATTTATTTATAATAT
GCAGTTAGATGGTTTGAATGAGAAGATACTCTCTATACCAACAGAAGGAG
ACGCTTCTCTAGCAAAAGAATTTGAGAAGATGAACTATCAGTGTTGGGCT
GGAACATTTGCAAACATGTTAGAAAAGGATCCATTCAGACCACTTTTAAA
TGTACTTGAACTCCGGGGACTCCTTACTGACAGGATCAGAGAAGAATTTA
GGTCTGGAGAGGAGTACTGGGCATTGGAAAGAAAGCTATGTTGTGCACTA
ACACACAAAATGGAGGTAGATATACCTCCTTAATTCTTGCTACTTTGCTC
AAATTAATTATATTTTAACTTTTACTATTTCTAAAGAATTAAGAAAGAAT
TTTCTCTACCTAGTACTGATTTTCCGCACAAAAAGTAGATGACTACTGCT
TTTCTTATTTTTCTGTCTAAACAGAAAAGGGAACAATGGTCTATCTAATG
GTATTGAGTGAATAGATCTTTGATCTTAGCACTGCCTTGTTGAGCAAAGT
TTCTCCTCATGCTTATGAACTATGGATGGTTTTGACATAAAGATATCAAG
GCTTTTTGACATATAGATATCCAGGCTGCAAACCTTGCTTGAGGCTCTAC
ATATATATTAGAAATGGGTAACATTTTAATAAATAGCACCGAGTTCTATG
AGATGTGCTCAAGTAATGAATGGATAAAAGAATAATATCGTTCAAGGGGA
AAGGGTTTAAAAGACTTGTACTAGTAGGAGGAAATGCACAAAAAATGTTT
ATGTATTAAATGTTTGCTTCTCCAGATATCTATCAAAAATGTTATGAGGG
CAATTCATCTAAAGTCGTTTGACTATCGGGTGCTGAATCTTCTTCTGTAT
CAGTTAAGAGGTCAAGAGGTAATTTGCTGTTAGCCAATTTATAAGTTTGT
CTTTTGCATGTTTGTGCATGCACTTACATCTGTTTGATTTTTTGAACCAT
GCTGGCATTCTAACATTCTATTTTGGATGCAAGTTCAAAACACTATTTAA
GGGTTTTGATAGAAGGGGAAGGAAAAGGAAATGTCTAAAGCACTACATAA
TTCTTTCTGACTTAATAAAATGACAACTAAAATGACAACTCCATGATGCC
GTGATTTGCTATGTTGGTTTTCATCAAGTTTTTTGGAAGTACATACAATG
ATTCTTGCTTACAGTTTCTGCCTTACTGTAATTGTGATATTGTTAATCTT
CAGTTTCAATCTTTAAACAATAAGCAGAACTGAAATTTTATATCTGCTTA
TAAATGTTATGCAGTCTGCATTCATACATTACAAGACATTATCAAAATGT
ATCCATCGCCTTTATGTTTTTACTATGATATATCTTGCACTCTATATTTT
GTTTCTGGTAACTTAGATTAACAAGGCTAAATGTACTTTCTTCGAAGTTG
TTTTAAAGGTTAATGACTTGCACATGGAATTCCTGTCAGTCTCTGAATTC
CTCGTAGAAATATCAGATGATCTGTAAGTGTTTTTTTTCCCGTGTTTTCT
GATTTTAGCTTAGATTTAAGTGGACAGTGTCAGTGGTATAGGCACTTTCA
AACACACAGAAATCAACCGATTTCAATCTCATTCCTCTTGTGCCGTTTTC
TTTTCATTTTTTTTTGGATAAGTGATGTTCTCATTCATTTTTGTTATAAT
ATGCTGTAAGCATGGTGTCAATTATATACTCAACTCCCAGATGATATAAC
AATGCTCCAGGTTTGACTATGAGGTATTTCCGTTCTTTTATGTTTTCTAA
TTGTTCTGATTACATGATTCAGTTTATATGTCATATTCTTTTATTGTTTT
GGTGGCTACGCTGCAGGATGACGTATTAGAAAATAATTTCAATATTTTGC
GCATGTTTGTCAAAATATATGGACCTTCAACTGCCCCAGCTATGTTGGTG
AGTATCAGATTGAAGTCATTCTGTGAAAGAAATTAGTAGGGTTTGAGTTT
TGAGTGGTGAGCTTATTGCTTTGATTACATGGAACCTAGGTCTGAAGTGT
GATGTTAAACATATGGATCCATTCCTTCCTATTTTCTCCTTGTTTCTAAA
ATCTAATCCTTGAAGTATCTCTGTCTGAATGGTATGGGGATAAGATCCTT
TTAAGGATCCTCCAAATACATCGAAATCTTGGAATATACTAGTGTCGGAT
ACTCACACCCAATTCCAAGTAACTTTTGCTTAAAATTACTTTTAGTCTCC
ACCTGATTTATCTTATGAGTGATTCTCGTAATACAGTCACTGTTAAAAGG
GACAAGTTTCCCATACGAACTCTTATGTCAGATGGTTCTTCTCTTTTCCA
TTGACAATTCAGGCAAAAAACATAACAGATGCTGAAGAGAGGTATGACAA
TTTATTGAAAACTTTGGATCCTCAGTTGTCCTCGAAATACCAGAGAAGAT
GCGAAGAAGCCGCTAAAGAAGGTAATTTGCAGACATTTAAATTTCGATAT
GGAAGTTCACCATCGTTGTTCTAGATGGATGCATTTAGGTATTAGTTGTG
GAAATTTCAGGTGGCAAGGTTTCAGGACACCCCCTTGGAACATGGAGTAT
TCCACCTGTGATCGTAAACGAGGATCTTTATCGATCAAACTGTCTAAATA
CTGAATGAACAGCTTAGGGGTTGAATGATCTAATTTGATATAAGAAGCCT
CTAGTTTCAGGAGAATAGTATACCCTTCCTGTATCTAACTCTAGCTTGGA
TGGTGGATTTGGCACTATACATTTCCTTGAAAACCTGTTATAGTTGCAGT
AATATGTTGATCCTGACACTGGTTTTTCTCTTAAAGTATACATATACGGT
GTCATGTATGCTTCACTGAAATACAAGGAACATGGGTTTGTGCTGAGTGG
GCTGACATGTGGTACAAGGTTTTTGGTTCCGTTGGGTACACTCTGTTATT
ATCTCAAATCAAACTTAATAGTAAGATGAAAATCGAGGTTGGATTTTTTA
AAACAATTTTCTTTTATAGTCAGAATGTACTCTGTTTGTCTGAAACTGAC
AGTTTTTCCTTATTCAATTGCATTGCCAGATTGGCGACATACAGCTGGTT
AAACG
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