g.barbadense_cottongen_reftransV1_0094847, g.barbadense_cottongen_reftransV1_0094847 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0094847
Unique Name	g.barbadense_cottongen_reftransV1_0094847
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2849

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
At05	chromosome	g.barbadense_cottongen_reftransV1_0094847:1..2849 . At05:11514993..11523093 +		n/a

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: BAC1_ARATH (Mitochondrial arginine transporter BAC1 OS=Arabidopsis thaliana GN=BAC1 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.717e-77
Identity = 138/237 (58.23%), Postives = 172/237 (72.57%), Query Frame = -1

Query:  399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109
            ++G +    PRP++I+PSA F GAIISFVLCP+ELVKCRMQIQGTDSLVP    Y+S LDCA++T+K+DGV                           TG FRGGS T LRE  GNAVFF+VYEY+RY++H +L+        LVDMGIG+L+GGLGG+A WS VLP DVAKTIIQT+ +K++  NPF+VL+SI++ +GL+GCY GLGPTI+RAFPANAAAIV WE +MK LGIK +
Sbjct:  102 LRGTLPDDGPRPEIIVPSAMFGGAIISFVLCPTELVKCRMQIQGTDSLVPNFRRYNSPLDCAVQTVKNDGV---------------------------TGIFRGGSATLLRECTGNAVFFTVYEYLRYHIHSRLEDSKLKDGYLVDMGIGVLTGGLGGIACWSAVLPFDVAKTIIQTSSEKATERNPFKVLSSIHKRAGLKGCYAGLGPTIVRAFPANAAAIVAWEFSMKMLGIKRD 311

HSP 2 Score: 100.908 bits (250), Expect = 1.567e-21
Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = -3

Query: 2464 YKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2640
            YKEYVAG+ AG+ATV VGHPFDTVKVKLQKHNT+VQG+ Y+NG HC +RIL TEGV  L
Sbjct:   15 YKEYVAGMMAGLATVAVGHPFDTVKVKLQKHNTDVQGLRYKNGLHCASRILQTEGVKGL 73

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BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCFS_DICDI (Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.697e-28
Identity = 77/217 (35.48%), Postives = 108/217 (49.77%), Query Frame = -1

Query:  411 SAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYV-RYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLG 1058
            +  FAG   S VL P ELVKCR+Q+Q T         Y  SLDC ++ +K  G+R                           GA+RG + T  RE +GN  FFS YE   RY+ + + K    D  NL  + I    GG   +A+W+ + P+DVAK+ IQ +       +  +VL  IY   G++G + G  PTI+R+FPANAA    +E+ +K LG
Sbjct:  104 AGGFAGVGASVVLTPVELVKCRLQVQTTGP-----QKYKGSLDCLVQILKEGGIR---------------------------GAYRGFTPTIAREFVGNMAFFSTYETCKRYFKNKENKPNDDDELNLPALIISGGLGG---MAYWTVLYPVDVAKSKIQISEGAGPSPSIVKVLKEIYSKEGVKGLFRGYTPTIIRSFPANAAMFSVYELVIKLLG 285

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BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCAT_ARATH (Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.344e-20
Identity = 74/224 (33.04%), Postives = 108/224 (48.21%), Query Frame = -1

Query:  411 SAAFAGAIISFVLCPSELVKCRMQIQG------TDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSP--TNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLG 1058
            + A AG  +SF+ CP+EL+KCR+Q QG      T S V     Y   +D A   ++S+G                      G R    G F+G   TF RE  GNA  F+ YE  + ++     +G SD ++L   G  I++GG+ G +FW  V P DV K+++Q   D  +P  T        I +  G++G Y G GP + R+ PANAA  + +E+    LG
Sbjct:  110 AGAGAGFAVSFLACPTELIKCRLQAQGALAGASTTSSVVAAVKYGGPMDVARHVLRSEG----------------------GAR----GLFKGLFPTFAREVPGNATMFAAYEAFKRFL-----AGGSDTSSL-GQGSLIMAGGVAGASFWGIVYPTDVVKSVLQV-DDYKNPRYTGSMDAFRKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEMTRSSLG 300

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BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCAT_MOUSE (Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus GN=Slc25a20 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.447e-17
Identity = 64/232 (27.59%), Postives = 105/232 (45.26%), Query Frame = -1

Query:  414 VQSSRPRPQVIIP----SAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFL 1097
            +Q   P  ++  P    +   +G   + ++ P E +KC +QIQ +       + YS +LDCA K  +  G+R                           G ++G   T +R+   + ++F  YE+++     + KS S      + +   +++GG  G+  W+  +P DV K+  QTAP    P     VL  + R  G+   Y G    ++RAFPANAA  + +EIAMKFL
Sbjct:   99 LQQKSPEDELSYPQLFTAGMLSGVFTTGIMTPGERIKCLLQIQASSGE----NKYSGTLDCAKKLYQEFGIR---------------------------GFYKGTVLTLMRDVPASGMYFMTYEWLKNLFTPEGKSVSD-----LSVPRILVAGGFAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIREEGVTSLYKGFNAVMIRAFPANAACFLGFEIAMKFL 294

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BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCAT_RAT (Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus GN=Slc25a20 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.813e-17
Identity = 63/232 (27.16%), Postives = 105/232 (45.26%), Query Frame = -1

Query:  414 VQSSRPRPQVIIP----SAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFL 1097
            +Q   P  ++  P    +   +G   + ++ P E +KC +QIQ +       + YS +LDCA K  +  G+R                           G ++G + T +R+   + ++F  YE+++   +L    G S H+  + +   +++GG  G+  W   +P DV K+  QTAP    P     VL  + R  G+   Y G    ++RAFPANAA  + +EI MK L
Sbjct:   99 LQQKSPEDELTYPQLFTAGMLSGVFTTGIMTPGERIKCLLQIQASSG----KNKYSGTLDCAKKLYQEFGIR---------------------------GFYKGTALTLMRDVPASGMYFMTYEWLK---NLFTPQGKSVHD--LSVPRVLVAGGFRGIFNWVVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIREEGVTSLYKGFNAVMIRAFPANAACFLGFEIPMKIL 294

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: DIF1_CAEEL (Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.413e-16
Identity = 68/225 (30.22%), Postives = 97/225 (43.11%), Query Frame = -1

Query:  399 SAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSG--YSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEI---AMKFLGIKNN 1058
            + A AG   + V+ P E +KC +Q+Q   S     SG  Y   LD   K  K  G+ +                            +RG   T LR+   +A + SVYEY      L+ K         +  G  +++GGL G+A W   +P DV K+ +QTAP+   P     VL  + R  G R  + G  P +LRAFPANAA     E+   A ++ GI  +
Sbjct:  110 AGALAGVFTTIVMVPGERIKCLLQVQQAGS---AGSGVHYDGPLDVVKKLYKQGGISSI---------------------------YRGTGATLLRDIPASAAYLSVYEY------LKKKFSGEGAQRTLSPGATLMAGGLAGIANWGVCIPADVLKSRLQTAPEGKYPDGIRGVLREVLREEGPRALFKGFWPVMLRAFPANAACFFGLELTLAAFRYFGIGGH 298

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BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCAT_HUMAN (Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.526e-16
Identity = 61/221 (27.60%), Postives = 101/221 (45.70%), Query Frame = -1

Query:  414 PQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFL 1076
            PQ +  +   +G   + ++ P E +KC +QIQ +       S Y+ +LDCA K  +  G+R                           G ++G   T +R+   + ++F  YE+++     + K  S      +     +++GG+ G+  W+  +P DV K+  QTAP    P     VL  + R  G+   Y G    ++RAFPANAA  + +E+AMKFL
Sbjct:  111 PQ-LFAAGMLSGVFTTGIMTPGERIKCLLQIQASSGE----SKYTGTLDCAKKLYQEFGIR---------------------------GIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSE-----LSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFL 294

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCFD_DICDI (Mitochondrial substrate carrier family protein D OS=Dictyostelium discoideum GN=mcfD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.936e-16
Identity = 67/229 (29.26%), Postives = 108/229 (47.16%), Query Frame = -1

Query:  402 IISFVLCPSELVKCRMQIQ----GTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLK-----------SGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSP--TNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKN 1037
            +IS ++ P +LVK ++Q+Q    G+ ++  +   Y   +D   +TIK DG++                           G F+G  +TF R+  G+AV+F VYE+++  +    K           + +S     V   + I +GG  G++FW ++ P+DV KT IQT PD   P  T+  Q +  IYR  G+   + G   TILRAFP +A   + +E     L  K+
Sbjct:  134 VISLLITPRDLVKSKLQVQCRPFGSTNVSLQ---YKGPIDVIRQTIKRDGIK---------------------------GMFKGIRSTFCRDIPGDAVYFVVYEFMKRKLLALSKNNNNNNNNNDNNDNSSPKAGVPAWVAIGAGGCAGMSFWMSIYPMDVVKTRIQTQPDHLPPQYTSVLQTITKIYREEGISVFFRGFSATILRAFPTSAVNFLMYETTRNLLNSKD 332

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCFL_DICDI (Mitochondrial substrate carrier family protein L OS=Dictyostelium discoideum GN=mcfL PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.043e-16
Identity = 71/221 (32.13%), Postives = 98/221 (44.34%), Query Frame = -1

Query:  414 IIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSP---TNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFL 1067
            I+ S A  G I+SFV CP E VK ++Q+Q T   +     Y+  +DC    IK  G+R                     Y+  +        T F R S+    +F  YE  + Y  L+ + GS      + MG   ++GG+ G  FW T  P DV ++ I T P   SP            IYR+ GL+G + G  P +LR FPAN A  V +E  MKF 
Sbjct:  108 IMVSGAITGWIVSFVACPIETVKSKLQVQYTGVKL-----YNGPIDC----IKKIGIRGL-------------------YKALI-------PTGFQRNSL--YAYFGCYELAQRY--LRREDGS------MTMGRSFIAGGIAGTGFWLTNFPFDVIRSRIMTMPYNESPPRYKGMIDCAKHIYRVDGLKGFWKGFSPCLLRTFPANGATFVAYECVMKFF 283

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Match: MCAT_MACFA (Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis GN=SLC25A20 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.852e-15
Identity = 58/215 (26.98%), Postives = 98/215 (45.58%), Query Frame = -1

Query:  414 SAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFL 1058
            +   +G   + ++ P E +KC +QIQ +       + Y+ +LDCA K  +  G+R                           G ++G   T +R+   + ++F  YE+V+     + K  S      + +   +++GG+ G+  W+  +P DV K+  QTAP    P     VL  +    G+   Y G    ++RAFPANAA  + +E+AMKFL
Sbjct:  116 AGMLSGIFTTGIMTPGERIKCLLQIQASSGE----TKYTGTLDCAKKLYQEFGIR---------------------------GIYKGTVVTLMRDVPASGMYFMTYEWVKNIFTPEGKRVSE-----LSVPRVLVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIPDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFL 294

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: A0A0D2UNK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G167400 PE=3 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 1.276e-122
Identity = 204/237 (86.08%), Postives = 208/237 (87.76%), Query Frame = -1

Query:  399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109
            ++GGVQSSRP+PQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDC LKTIKSDGV                           TGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMGIGILSGGLGGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWE+AMK LGIKNN
Sbjct:   19 LQGGVQSSRPQPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCTLKTIKSDGV---------------------------TGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMGIGILSGGLGGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEVAMKLLGIKNN 228

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: A0A0D2TRA1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G167400 PE=3 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 1.507e-121
Identity = 204/237 (86.08%), Postives = 208/237 (87.76%), Query Frame = -1

Query:  399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109
            ++GGVQSSRP+PQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDC LKTIKSDGV                           TGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMGIGILSGGLGGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWE+AMK LGIKNN
Sbjct:   88 LQGGVQSSRPQPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCTLKTIKSDGV---------------------------TGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMGIGILSGGLGGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEVAMKLLGIKNN 297

HSP 2 Score: 107.457 bits (267), Expect = 1.027e-21
Identity = 55/70 (78.57%), Postives = 55/70 (78.57%), Query Frame = -3

Query: 2464 MVMEDSRKPSGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2673
            MVMEDSRKP  YKEYVAGLFAGVATVVVGHPFDTVK           GITYRNGFHCTARILATEGV  L
Sbjct:    1 MVMEDSRKPYSYKEYVAGLFAGVATVVVGHPFDTVK-----------GITYRNGFHCTARILATEGVRGL 59

HSP 3 Score: 71.2478 bits (173), Expect = 4.530e-10
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = -3

Query: 1264 VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ 1365
            VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ
Sbjct:   56 VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ 89

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: A0A0D2QHQ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G167400 PE=3 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 1.854e-121
Identity = 204/237 (86.08%), Postives = 208/237 (87.76%), Query Frame = -1

Query:  399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109
            ++GGVQSSRP+PQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDC LKTIKSDGV                           TGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMGIGILSGGLGGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWE+AMK LGIKNN
Sbjct:   99 LQGGVQSSRPQPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCTLKTIKSDGV---------------------------TGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMGIGILSGGLGGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEVAMKLLGIKNN 308

HSP 2 Score: 138.658 bits (348), Expect = 4.106e-32
Identity = 66/70 (94.29%), Postives = 66/70 (94.29%), Query Frame = -3

Query: 2464 MVMEDSRKPSGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2673
            MVMEDSRKP  YKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGV  L
Sbjct:    1 MVMEDSRKPYSYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVRGL 70

HSP 3 Score: 70.4774 bits (171), Expect = 1.154e-9
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = -3

Query: 1264 VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ 1365
            VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ
Sbjct:   67 VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ 100

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: A0A061GMA1_THECC (Mitochondrial substrate carrier family protein OS=Theobroma cacao GN=TCM_029831 PE=3 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 1.904e-101
Identity = 175/237 (73.84%), Postives = 194/237 (81.86%), Query Frame = -1

Query:  399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109
            ++GGVQS+ P+PQVIIPSAAF GAIISF+LCPSELVKCRMQ+QGTDS+VPK   YSS LDCALKTIK DGV                           TG FRGGSTT LRES+GNAVFFSVYEYVR+Y+HLQL +GS +H+NL++MGIGILSGGLGGVAFWS VLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYR +GLRGCY GLGPTI+RAFPANAAAIVTWE+AMK L IKN+
Sbjct:   97 LQGGVQSTGPQPQVIIPSAAFGGAIISFILCPSELVKCRMQVQGTDSVVPKSCSYSSPLDCALKTIKGDGV---------------------------TGIFRGGSTTLLRESLGNAVFFSVYEYVRHYLHLQLNTGSFNHSNLINMGIGILSGGLGGVAFWSAVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRRAGLRGCYAGLGPTIVRAFPANAAAIVTWELAMKLLEIKND 306

HSP 2 Score: 115.931 bits (289), Expect = 1.753e-24
Identity = 54/68 (79.41%), Postives = 57/68 (83.82%), Query Frame = -3

Query: 2464 MEDSRKPSGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2667
            M +S  PSGYKEY+AGL AGVATV+ GHPFDTVKVKLQKHNT V GI YRNG HCTARILATEGV  L
Sbjct:    1 MGESSAPSGYKEYLAGLLAGVATVITGHPFDTVKVKLQKHNTEVHGIKYRNGLHCTARILATEGVRGL 68

HSP 3 Score: 63.5438 bits (153), Expect = 2.146e-7
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = -3

Query: 1264 VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ 1365
            VRGLY GAT SFVG+AFESSLLFGIYSQTKQSLQ
Sbjct:   65 VRGLYTGATSSFVGVAFESSLLFGIYSQTKQSLQ 98

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: A0A0B0NDS1_GOSAR (Mitochondrial substrate carrier family protein S OS=Gossypium arboreum GN=F383_09970 PE=3 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 4.440e-98
Identity = 173/202 (85.64%), Postives = 175/202 (86.63%), Query Frame = -1

Query:  399 VKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1004
            ++CRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGV                           TGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMGIGILSGGLGGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN
Sbjct:   99 LQCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGV---------------------------TGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMGIGILSGGLGGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 273

HSP 2 Score: 143.28 bits (360), Expect = 4.560e-34
Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = -3

Query: 2464 MVMEDSRKPSGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2673
            MVMEDSRKPSGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGV  L
Sbjct:    1 MVMEDSRKPSGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVRGL 70

HSP 3 Score: 73.559 bits (179), Expect = 6.647e-11
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = -3

Query: 1255 VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQVRI 1365
            VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ R+
Sbjct:   67 VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQCRM 103

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: A0A067GQD0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021924mg PE=3 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 2.051e-96
Identity = 166/237 (70.04%), Postives = 190/237 (80.17%), Query Frame = -1

Query:  399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109
            ++GGVQS  P+P VIIPSAAF G+IISFVLCPSELVKCRMQ+QGTDSLVPK   Y+S LDCAL+T+K +GV                              FRGGSTTFLRE+IGNAVFFSVYE+VRYYMHL+LK+ SSDH+NL+DMGIGI+SGGLGGVAFWS VLPLDVAKTIIQTAPDK++ TNPFQ+LNSIYR +GL+GCYTGLGPTI+RAFPANA AIVTWE+A K LGIK+ 
Sbjct:   96 LQGGVQSGGPQPNVIIPSAAFGGSIISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGV---------------------------MAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVAFWSAVLPLDVAKTIIQTAPDKNASTNPFQILNSIYRRAGLKGCYTGLGPTIMRAFPANATAIVTWELAGKLLGIKHG 305

HSP 2 Score: 109.383 bits (272), Expect = 2.769e-22
Identity = 54/68 (79.41%), Postives = 57/68 (83.82%), Query Frame = -3

Query: 2464 MEDSRKPSGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2667
            ME+S   SGYKEYVAGL AGVATV+VGHPFDTVKVKLQKHNT V GI Y+NG HCTARIL TEGV  L
Sbjct:    1 MEESWG-SGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEGVRGL 67

HSP 3 Score: 64.6994 bits (156), Expect = 7.398e-8
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = -3

Query: 1264 VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ 1365
            VRGLY GATPSF+GMAFESSLLFGIYSQTKQ LQ
Sbjct:   64 VRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQ 97

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: V4TQ13_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016062mg PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 2.658e-96
Identity = 166/237 (70.04%), Postives = 190/237 (80.17%), Query Frame = -1

Query:  399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109
            ++GGVQS  P+P VIIPSAAF G+IISFVLCPSELVKCRMQ+QGTDSLVPK   Y+S LDCAL+T+K +GV                              FRGGSTTFLRE+IGNAVFFSVYE+VRYYMHL+LK+ SSDH+NL+DMGIGI+SGGLGGVAFWS VLPLDVAKTIIQTAPDK++ TNPFQ+LNSIYR +GL+GCYTGLGPTI+RAFPANA AIVTWE+A K LGIK+ 
Sbjct:   96 LQGGVQSGGPQPNVIIPSAAFGGSIISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGV---------------------------MAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVAFWSAVLPLDVAKTIIQTAPDKNASTNPFQILNSIYRRAGLKGCYTGLGPTIMRAFPANATAIVTWELAGKLLGIKHG 305

HSP 2 Score: 107.457 bits (267), Expect = 1.079e-21
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = -3

Query: 2464 SGYKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2646
            SGYKEYVAGL AG+ATV+VGHPFDTVKVKLQKHNT V GI Y+NG HCTARIL TEGV  L
Sbjct:    7 SGYKEYVAGLIAGIATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEGVRGL 67

HSP 3 Score: 64.6994 bits (156), Expect = 7.467e-8
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = -3

Query: 1264 VRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ 1365
            VRGLY GATPSF+GMAFESSLLFGIYSQTKQ LQ
Sbjct:   64 VRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQ 97

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: B9N3H8_POPTR (Mitochondrial substrate carrier family protein OS=Populus trichocarpa GN=POPTR_0011s05500g PE=3 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 4.991e-95
Identity = 169/236 (71.61%), Postives = 185/236 (78.39%), Query Frame = -1

Query:  402 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKN 1109
            ++GG QS  PRPQVIIPSAA+ GAIISFVLCPSELVKCRMQIQGTDSLVPK S YSS LDCAL+T+K++GV                           TG FRGG TT LRESIG+AVFFSVYEYVRYYMHLQLK   SDH+NL DMGIGI++GGL GVAFWS VLPLDVAKTIIQTAPDKSS  NPF VLNSIY  +GL+GCYTG GPTI+RAFPANAAAIVTWE+AMK LG K+
Sbjct:   94 LQGGGQSDVPRPQVIIPSAAYGGAIISFVLCPSELVKCRMQIQGTDSLVPKFSRYSSPLDCALQTMKNEGV---------------------------TGIFRGGFTTLLRESIGSAVFFSVYEYVRYYMHLQLKPTLSDHSNLTDMGIGIVTGGLSGVAFWSAVLPLDVAKTIIQTAPDKSSTRNPFAVLNSIYSRAGLKGCYTGFGPTIVRAFPANAAAIVTWELAMKMLGDKS 302

HSP 2 Score: 98.5969 bits (244), Expect = 7.010e-19
Identity = 45/59 (76.27%), Postives = 48/59 (81.36%), Query Frame = -3

Query: 2464 YKEYVAGLFAGVATVVVGHPFDTVKVKLQKHNTNVQGITYRNGFHCTARILATEGVCSL 2640
            YKEY+AGL AGVATV+ GHPFDTVKV LQKHNT   GI Y+NG HCTARIL TEGV  L
Sbjct:    7 YKEYLAGLLAGVATVITGHPFDTVKVMLQKHNTEAHGIKYKNGLHCTARILQTEGVKGL 65

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: A0A0D2S2P4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G167400 PE=3 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 1.995e-91
Identity = 170/237 (71.73%), Postives = 177/237 (74.68%), Query Frame = -1

Query:  399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109
            ++GGVQSSRP+PQVIIPSAAFAGAIISFVL                              C  + +K                        +  RLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMGIGILSGGLGGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWE+AMK LGIKNN
Sbjct:   19 LQGGVQSSRPQPQVIIPSAAFAGAIISFVL------------------------------CPSELVKD-----------------------ANSRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMGIGILSGGLGGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEVAMKLLGIKNN 202

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Match: B9RBB5_RICCO (Mitochondrial carnitine/acylcarnitine carrier protein, putative OS=Ricinus communis GN=RCOM_1674030 PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 3.323e-91
Identity = 162/237 (68.35%), Postives = 184/237 (77.64%), Query Frame = -1

Query:  399 IKGGVQSSRPRPQVIIPSAAFAGAIISFVLCPSELVKCRMQIQGTDSLVPKCSGYSSSLDCALKTIKSDGVRNTLPFGNLICT*FKLMEHLSGYRLQVTGAFRGGSTTFLRESIGNAVFFSVYEYVRYYMHLQLKSGSSDHNNLVDMXXXXXXXXXXGVAFWSTVLPLDVAKTIIQTAPDKSSPTNPFQVLNSIYRMSGLRGCYTGLGPTILRAFPANAAAIVTWEIAMKFLGIKNN 1109
            ++GG+ S  P PQVIIPSAA+ GAIISFVLCPSEL+KCRMQ+QGTD LVPK S YS  LDCA +T+K DGV                           +G FRGG  T LRES GNAVFFSVYEYVRYYMHLQLK  SS+H++L+DMGIGI+SGGLGGVAFWS VLPLDVAKT+IQTAPDKS   NPF+VLNSIYR +GLRGCY GLGPTI+RAFPANAAAIVTWE+AMK LGI+++
Sbjct:   60 LQGGLHSDVPIPQVIIPSAAYGGAIISFVLCPSELIKCRMQVQGTDILVPKFSRYSGPLDCAHQTVKHDGV---------------------------SGIFRGGLATLLRESFGNAVFFSVYEYVRYYMHLQLKDSSSNHSHLIDMGIGIMSGGLGGVAFWSAVLPLDVAKTVIQTAPDKSFTRNPFRVLNSIYRRAGLRGCYAGLGPTIVRAFPANAAAIVTWELAMKVLGIRHD 269

HSP 2 Score: 61.6178 bits (148), Expect = 6.020e-7
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = -3

Query: 1264 WQVRGLYIGATPSFVGMAFESSLLFGIYSQTKQSLQ 1371
            +QV+GLY GAT SFVGMAFESSLLFG+YSQ KQSLQ
Sbjct:   26 FQVKGLYRGATSSFVGMAFESSLLFGVYSQRKQSLQ 61

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
BAC1_ARATH	1.717e-77	58.23	Mitochondrial arginine transporter BAC1 OS=Arabido...	[more]
MCFS_DICDI	3.697e-28	35.48	Mitochondrial substrate carrier family protein S O...	[more]
MCAT_ARATH	1.344e-20	33.04	Mitochondrial carnitine/acylcarnitine carrier-like...	[more]
MCAT_MOUSE	2.447e-17	27.59	Mitochondrial carnitine/acylcarnitine carrier prot...	[more]
MCAT_RAT	5.813e-17	27.16	Mitochondrial carnitine/acylcarnitine carrier prot...	[more]
DIF1_CAEEL	1.413e-16	30.22	Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 P...	[more]
MCAT_HUMAN	3.526e-16	27.60	Mitochondrial carnitine/acylcarnitine carrier prot...	[more]
MCFD_DICDI	3.936e-16	29.26	Mitochondrial substrate carrier family protein D O...	[more]
MCFL_DICDI	4.043e-16	32.13	Mitochondrial substrate carrier family protein L O...	[more]
MCAT_MACFA	1.852e-15	26.98	Mitochondrial carnitine/acylcarnitine carrier prot...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0094847 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2UNK7_GOSRA	1.276e-122	86.08	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2TRA1_GOSRA	1.507e-121	86.08	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2QHQ2_GOSRA	1.854e-121	86.08	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061GMA1_THECC	1.904e-101	73.84	Mitochondrial substrate carrier family protein OS=...	[more]
A0A0B0NDS1_GOSAR	4.440e-98	85.64	Mitochondrial substrate carrier family protein S O...	[more]
A0A067GQD0_CITSI	2.051e-96	70.04	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
V4TQ13_9ROSI	2.658e-96	70.04	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
B9N3H8_POPTR	4.991e-95	71.61	Mitochondrial substrate carrier family protein OS=...	[more]
A0A0D2S2P4_GOSRA	1.995e-91	71.73	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
B9RBB5_RICCO	3.323e-91	68.35	Mitochondrial carnitine/acylcarnitine carrier prot...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023395	Mitochondrial carrier domain	GENE3D	1.50.40.10		coord: 64..147 e-value: 2.3E-12 score: 45.6
IPR023395	Mitochondrial carrier domain	SUPERFAMILY	103506	Mitochondrial carrier	coord: 64..147
IPR018108	Mitochondrial substrate/solute carrier	PFAM	PF00153	Mito_carr	coord: 92..146 e-value: 2.6E-8 score: 33.5
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 84..157 score: 9.598
None	No IPR available	PANTHER	PTHR24089:SF388	MITOCHONDRIAL ARGININE TRANSPORTER BAC1	coord: 75..146
None	No IPR available	PANTHER	PTHR24089	FAMILY NOT NAMED	coord: 75..146
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..87
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 106..157
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 88..105

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0094847 ID=g.barbadense_cottongen_reftransV1_0094847; Name=g.barbadense_cottongen_reftransV1_0094847; organism=Gossypium barbadense; type=contig; length=2849bp
TAAAACTAATTCAAATCAAATACTAATGGCCAACCAGGTGGAAGTACCAA
ATCAATAAAGTATATAATATTCGCTTAAATAAAATTATCCAATATTTGAT
AAAGAAGCATCCTCATGCAGACAACAATAGACCTGTGAAAAACTCTTCCT
GCACCGACATGAAAAAAAATCGGGGGGATAACTCGAAAAACATTAATGAT
TGTTTCAGCCGCTCAAGTGCTATACTATTGCACTCTTTCCTGCAAAAGAA
ATTAAACTTCAAGGTCATATCATAGAAATCCTAAGGATCAACCCATGCCA
AGATGTGAGATGAAAGATCAGCCACCGAGCCAATTATATAACTTCAAAAA
ATGTTAGAAGCCTCTTGTGATTAGATGAGTTAATTATTAGCTTCCTTAGT
TGTTCTTGATTCCGAGAAACTTCATGGCTATCTCCCAGGTAACGATTGCA
GCTGCATTAGCAGGAAAAGCTCTCAGTATAGTAGGACCCAGGCCTGTGTA
GCATCCTCTAAGTCCAGACATCCGATATATCGAATTTAAAACTTGAAACG
GATTTGTCGGAGAGCTTTTATCTGGAGCGGTCTGGATAATGGTTTTTGCC
ACATCCAAAGGTAACACAGTTGACCAGAAAGCTACACCACCCAGACCACC
ACTCAGAATTCCAATTCCCATATCAACCAAATTGTTATGGTCAGATGAAC
CAGATTTTAGCTGTAAATGCATATAATAGCGGACATATTCATACACACTA
AAAAATACTGCATTTCCAATAGATTCCCTTAAAAATGTTGTAGAGCCACC
ACGAAAGGCGCCTGTAACCTGTAACCTGTAACCTGAAAGGTGTTCCATTA
GTTTAAATCACGTACAAATTAAGTTGCCAAAAGGCAGAGTATTTCTCACC
CCATCACTTTTTATGGTTTTTAGTGCGCAATCAAGAGAACTACTGTAGCC
ACTGCACTTTGGAACCAAAGAGTCAGTACCTTGAATTTGCATCCTACACT
TCACTAGCTCTGACGGACATAGAACAAAACTGATAATAGCTCCAGCGAAA
GCAGCAGAAGGAATTATTACTTGGGGCCGGGGCCTGCTACTCTGAACTCC
TCCCTTAATTGGCACAAAAAATCTTTTTAAAAAATAATTTAAAACATTAC
AATGTGTTGGAAACATGCCTATGATATTATTAAAACAACTAGTTCCCAAT
CTAGTTTCTGCAATAGGAGTTTCATGGATGGGTATATCACCTCCAATTCC
CTGTAATACGAACCTGCAGTGACTGTTTTGTTTGCGAATAAATGCCAAAA
AGAAGTGAACTTTCAAAAGCCATCCCAACAAAAGATGGCGTTGCCCCTAT
ATAAAGTCCTCTAACCTGCCAAAGCTAATTATGAGTTCTCCAAAAAAGAA
AAAATTCAAATATGTCAAGAGTAAGGGAGAGAGTAACAACCATGTATAAC
ATATACAGCCAAAAAAGTGAACCAATGATTTCTATTCCACAGACAACCTT
GTACATGCCAAAGTATCCTCTCAACTTATGTAGTAGACCAAAATCTTGGT
TCTAGAATTGCAGCTATAGATATTGAGAATTTGTAAGAATATTTCTTTAT
TCTTTCTTTTCCCTTTTGGACATATACAAATTGCAAATTCTCTCTATCTT
CACAGATTCATGGATAACTTCAATTACTTTTTCCAATATTGACATTTACA
TTTTTAGATTTTAGGACATTAGCAGACAAGATCCATTGTAGGAATAAACA
CATAACAAGCTTGTCCGTGCAAAATGTTTAAATCTGAGACAGCAGAACAT
TTAGGTCATTATATCCTACTGATTCATTTTGCATTTGAACAGAAAGAATC
CCTATAATCAAAATCAATAGGCCTTTGAGTTCAAGAATGACCAAAAGTCA
TAAACAAATAACATGATCTCTTTCCACCGCATGTATTTATCTAGATGTCA
GTGGTCTAAACTCTCAACAAAGGTAGCATTTGGTATGATGGAAAGTAGTC
ACTTTCCTAGGAATTTAATAAGCTGGAAAATGATTCCAACGTTTGGTATG
TTAGATTTTATTTACTTTTCTTGGAATCTAACTTTCCCTTAAGAATTACT
TTCCCATAGACATGGCAATATGATTCCCATGATAAAAAGGTGGGAAAATT
ACTTTCCCATTCCCATGTAGATTGAAAAGTTAAAAAAATATTAAGACAAA
ATTAACCCTATTTTATATTGGAAAAACTATTGTCTTCTTCCTTTGTCCTA
CCACTTGATTTTCTCTATTACTTCCACCAGATTCTTCCTACGATTTTAAT
CAATGCCTTCCAATGTATTAACTTCCTCAGTAATCACATTCCCAGCAATC
ATATTCCAGTGAATCACATTCCATTGGAATCATATCATAGAAAAGCACCA
AACGCTACCGACGAGCAAATTTACAAACAGGGCTCTTGATGGTGAAAAGA
AAAGAACAAAGATTAAGGAGCATACCCCTTCAGTTGCGAGTATCCTAGCA
GTGCAATGGAAGCCATTCCTATATGTAATCCCCTGCACATTAGTATTGTG
TTTCTGCAACTTAACCTTGACAGTATCGAAGGGGTGACCGACGACCACAG
TCGCAACACCGGCGAACAAGCCCGCGACGTACTCTTTGTAACCGGAAGGT
TTGCGACTGTCTTCCATGACCATGTTTTGGTAAATGTCTAAAGCCTTCTT
TTAGTTTGAAAGTAAAAAGAACATCGGAGATTCGGTCCACTCCGCGCCAG
ATCCTATAGTGTGATTGTGCGAGGGAGAGCTTCAGCGAAATCCTCGTCAA
AATCTCTACCATCAATAATCTAGAACTAAATTACTACTATATGTTCTAT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR023395	Mt_carrier_dom_sf
IPR018108	Mitochondrial_sb/sol_carrier

Search form

g.barbadense_cottongen_reftransV1_0094847, g.barbadense_cottongen_reftransV1_0094847 (contig) Gossypium barbadense

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