g.barbadense_cottongen_reftransV1_0093379, g.barbadense_cottongen_reftransV1_0093379 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0093379
Unique Nameg.barbadense_cottongen_reftransV1_0093379
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2972
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Dt05chromosomeg.barbadense_cottongen_reftransV1_0093379:1..2972 .
Dt05:4268726..4276033 -		n/a
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_RAT (DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.608e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1 
Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQSRFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 208
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL4_HUMAN (DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.642e-19
Identity = 59/147 (40.14%), Postives = 88/147 (59.86%), Query Frame = -1 
Query:  753 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNL 1193
             PEG+E  C D+GV+  +V +L+LAWKL A+  GYFT  EW  G+ +L  D+  KL+  L  L   +   +N++  Y YAF +   E+ Q+S+DI +   +L L+LG +  P      ++L+ Q+ YKVIN DQW N L F + +NL
Sbjct:  121 GPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRYAFDFA-REKDQRSLDINTAKCMLGLLLG-KIWPLFPVFHQFLE-QSKYKVINKDQWCNVLEFSRTINL 264
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_MOUSE (DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.714e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1 
Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQSRFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 208
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_BOVIN (DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.723e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1 
Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   65 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 207
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_HUMAN (DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.897e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1 
Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 208
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL4_MOUSE (DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.973e-19
Identity = 58/146 (39.73%), Postives = 88/146 (60.27%), Query Frame = -1 
Query:  753 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNL 1190
            PEG+E  C D+GV+  +V +L+LAWKL A+  GYFT  EW  G+ +L  D+  KL+  L  L   +   +N++  Y YAF +   E+ Q+S+DI +   +L L+LG +  P      ++L+ Q+ YKVIN DQW N L F + ++L
Sbjct:  122 PEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFA-REKDQRSLDINTAKCMLGLLLG-KIWPLFPVFHQFLE-QSKYKVINKDQWCNVLEFSRTISL 264
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_PONAB (DCN1-like protein 5 OS=Pongo abelii GN=DCUN1D5 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.043e-18
Identity = 53/146 (36.30%), Postives = 90/146 (61.64%), Query Frame = -1 
Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +Y + Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYPE-QSKYRVMNKDQWYNVLEFSRAVH 208
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL4_DANRE (DCN1-like protein 4 OS=Danio rerio GN=dcun1d4 PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.220e-18
Identity = 58/147 (39.46%), Postives = 89/147 (60.54%), Query Frame = -1 
Query:  753 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNL 1193
             PEG+E  C D+GV+  +V +L+LAWKL A+  GYFT  EW  G+ +L  DS  KL+ +L  L   +   ++++  Y YAF +   E+ Q+S+D+ +   +L L+LG  + P      ++L+ Q+ YKVIN DQW N L F + +NL
Sbjct:  109 GPEGMEKFCEDIGVEPENVVMLVLAWKLDAQSMGYFTLQEWLKGMGSLQCDSTEKLRNSLDYLRSVLNDATSFKLIYRYAFDFA-REKDQRSLDLNTAKCMLGLLLGKTW-PLFPVFNQFLE-QSKYKVINKDQWCNVLEFSRTINL 252
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCN1M_DICDI (DCN1-like protein 2 OS=Dictyostelium discoideum GN=DDB_G0272016 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.832e-16
Identity = 55/145 (37.93%), Postives = 82/145 (56.55%), Query Frame = -1 
Query:  759 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSN-YEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEV 1190
            PEGI   CSD+G+      IL+LAW + A K GYF+++E+ +G + L    LS LKK L+   ++++  S  + D Y YAF +    E +KSVD+ +  E+L L+L     P   +   +L  Q + K IN DQW+ FL F + V
Sbjct:   96 PEGIARFCSDIGLAPDSFEILVLAWTMNASKMGYFSKNEFSSGFEKLQCSDLSTLKKQLNSTSQKLKHDSTKFTDLYKYAFGFASEVESKKSVDLGTAAEMLKLLLPEG--PHTTNFAAFLCTQPN-KSINKDQWLCFLEFSRTV 237
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL3_RAT (DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.920e-10
Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = -1 
Query:  771 EGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCL-TEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYL-KVQNDYKVINSDQWINFLRF 1187
            EG+E  C+DL VD T+ R+L+LAWK +A     FT+ E+  G KA+  DS+  +      L  E ++   ++D Y + F++ L +EE Q+S+  E    L  LV      P +D  + +L +  +  K I+ D W  FL F
Sbjct:  109 EGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNF 249
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A0D2RUI0_GOSRA (Defective in cullin neddylation protein OS=Gossypium raimondii GN=B456_009G053700 PE=4 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 1.707e-109
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = -1 
Query:  636 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKFANFIFPFAAITQYHKVSFHLHWKSVLAARMKKN 1190
            PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVDSLSKLKKALSDLEKEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEM+KFANFIFPFAAITQYHKVSFHLHWKSVLAARMKKN
Sbjct:   55 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVDSLSKLKKALSDLEKEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMHKFANFIFPFAAITQYHKVSFHLHWKSVLAARMKKN 239
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A0B0ME22_GOSAR (Defective in cullin neddylation protein OS=Gossypium arboreum GN=F383_15731 PE=4 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 2.767e-77
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = -1 
Query:  759 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEV 1190
            PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVDSLSKLKKALSDLEKEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEV
Sbjct:   55 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVDSLSKLKKALSDLEKEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEV 198
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A0D2RUH3_GOSRA (Defective in cullin neddylation protein OS=Gossypium raimondii GN=B456_009G053700 PE=4 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 3.689e-77
Identity = 143/152 (94.08%), Postives = 148/152 (97.37%), Query Frame = -1 
Query:  735 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKF 1190
            PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVDSLSKLKKALSDLEKEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKE++  ++  +
Sbjct:   55 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVDSLSKLKKALSDLEKEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEISFPDLENY 206

HSP 2 Score: 73.9442 bits (180), Expect = 4.358e-11
Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = -1 
Query:  369 NFESLLEQISFPDLENYDAIQAWPLILDNYVEWMREKHS 485
            NF    ++ISFPDLENYDA QAWPLILDNYVEWMREKHS
Sbjct:  190 NFLRFCKEISFPDLENYDATQAWPLILDNYVEWMREKHS 228
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A0D2R5X8_GOSRA (Defective in cullin neddylation protein OS=Gossypium raimondii GN=B456_010G111400 PE=4 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.774e-70
Identity = 129/157 (82.17%), Postives = 144/157 (91.72%), Query Frame = -1 
Query:  720 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKFANFIF 1190
            P+GIEALCSDLGVDYTDVRILMLAWKLKA KQGYFTQDEW+TG+KALGVDSLSKLKKAL +LE EV KP+NYEDFYTYAFRYCLTEEKQKS+DI+SICELLNLVLG QFRP++D L+EYLKVQ+DYKVIN DQWINFLRFC+EV+L E   F  ++F
Sbjct:   55 PDGIEALCSDLGVDYTDVRILMLAWKLKAGKQGYFTQDEWRTGMKALGVDSLSKLKKALCELEIEVGKPTNYEDFYTYAFRYCLTEEKQKSLDIDSICELLNLVLGAQFRPKVDVLVEYLKVQSDYKVINLDQWINFLRFCQEVSLFEKKMFILYLF 211
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A0B0PD05_GOSAR (Defective in cullin neddylation protein OS=Gossypium arboreum GN=F383_02662 PE=4 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.869e-68
Identity = 125/152 (82.24%), Postives = 141/152 (92.76%), Query Frame = -1 
Query:  735 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKF 1190
            P+GIEALCSDLGVDYTDVRILMLAWKLKA KQGYFTQDEW+TG+KALGVDSLSKLKKAL +LE EV KP+NYEDFYTYAFRYCLTEEKQKS+DI+SICELLNLVLG QFRPQ+D L+EYLKVQ+DYKVIN DQWINFLRFC+E++  ++  +
Sbjct:   55 PDGIEALCSDLGVDYTDVRILMLAWKLKAGKQGYFTQDEWRTGMKALGVDSLSKLKKALCELEIEVGKPTNYEDFYTYAFRYCLTEEKQKSLDIDSICELLNLVLGAQFRPQVDVLVEYLKVQSDYKVINLDQWINFLRFCQEISFPDLGNY 206

HSP 2 Score: 65.0846 bits (157), Expect = 2.821e-8
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = -1 
Query:  369 NFESLLEQISFPDLENYDAIQAWPLILDNYVEWMREKHS 485
            NF    ++ISFPDL NYD+  AWPLILDN+VEWMR+KHS
Sbjct:  190 NFLRFCQEISFPDLGNYDSALAWPLILDNFVEWMRQKHS 228
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A0D2V8L7_GOSRA (Defective in cullin neddylation protein OS=Gossypium raimondii GN=B456_010G111400 PE=4 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.013e-68
Identity = 124/152 (81.58%), Postives = 141/152 (92.76%), Query Frame = -1 
Query:  735 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKF 1190
            P+GIEALCSDLGVDYTDVRILMLAWKLKA KQGYFTQDEW+TG+KALGVDSLSKLKKAL +LE EV KP+NYEDFYTYAFRYCLTEEKQKS+DI+SICELLNLVLG QFRP++D L+EYLKVQ+DYKVIN DQWINFLRFC+E++  ++  +
Sbjct:   55 PDGIEALCSDLGVDYTDVRILMLAWKLKAGKQGYFTQDEWRTGMKALGVDSLSKLKKALCELEIEVGKPTNYEDFYTYAFRYCLTEEKQKSLDIDSICELLNLVLGAQFRPKVDVLVEYLKVQSDYKVINLDQWINFLRFCQEISFPDLGNY 206

HSP 2 Score: 63.5438 bits (153), Expect = 8.188e-8
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = -1 
Query:  369 NFESLLEQISFPDLENYDAIQAWPLILDNYVEWMREKHS 485
            NF    ++ISFPDL NYD+  AWPLILDN+VEWMR+KH 
Sbjct:  190 NFLRFCQEISFPDLGNYDSALAWPLILDNFVEWMRQKHG 228
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A061GJB0_THECC (Defective in cullin neddylation protein (Fragment) OS=Theobroma cacao GN=TCM_037113 PE=4 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.877e-65
Identity = 122/149 (81.88%), Postives = 137/149 (91.95%), Query Frame = -1 
Query:  744 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEM 1190
            P+GIEA CSDLGVD TDVRILMLAWKLKA++QGYFTQDEW+TGLK L VDS+SKLKKAL +LEKEV KPSNY++FY+YAFRYCLTEE QKSVDIESICELLNLVLG QFRPQ+D LIEYLKVQ+DYKVIN DQWINFLRFC+E+N  ++
Sbjct:   33 PDGIEAFCSDLGVDCTDVRILMLAWKLKAQRQGYFTQDEWRTGLKELRVDSISKLKKALPELEKEVGKPSNYDNFYSYAFRYCLTEEMQKSVDIESICELLNLVLGAQFRPQVDLLIEYLKVQSDYKVINLDQWINFLRFCQEINFPDL 181
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A061GIC4_THECC (Defective in cullin neddylation protein OS=Theobroma cacao GN=TCM_037113 PE=4 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.324e-64
Identity = 122/149 (81.88%), Postives = 137/149 (91.95%), Query Frame = -1 
Query:  744 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEM 1190
            P+GIEA CSDLGVD TDVRILMLAWKLKA++QGYFTQDEW+TGLK L VDS+SKLKKAL +LEKEV KPSNY++FY+YAFRYCLTEE QKSVDIESICELLNLVLG QFRPQ+D LIEYLKVQ+DYKVIN DQWINFLRFC+E+N  ++
Sbjct:   55 PDGIEAFCSDLGVDCTDVRILMLAWKLKAQRQGYFTQDEWRTGLKELRVDSISKLKKALPELEKEVGKPSNYDNFYSYAFRYCLTEEMQKSVDIESICELLNLVLGAQFRPQVDLLIEYLKVQSDYKVINLDQWINFLRFCQEINFPDL 203

HSP 2 Score: 69.707 bits (169), Expect = 9.240e-10
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = -1 
Query:  369 NFESLLEQISFPDLENYDAIQAWPLILDNYVEWMREKHS 485
            NF    ++I+FPDLENYDA QAWPLILDN+V+WMREKHS
Sbjct:  190 NFLRFCQEINFPDLENYDATQAWPLILDNFVDWMREKHS 228
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A067L3H3_JATCU (Defective in cullin neddylation protein OS=Jatropha curcas GN=JCGZ_03992 PE=4 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.697e-62
Identity = 117/145 (80.69%), Postives = 135/145 (93.10%), Query Frame = -1 
Query:  756 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1190
            PEGIEALCSDL V++TDVRILMLAWK+KA+KQGYFTQ+EW+TGLKAL  D+L+KLKKAL +LEKEV  P N+EDFY+YAFRYCLTEEKQKSVDIESICELL+LVLG QFR +IDSLIEYLK+Q+DYKVIN DQW+NFLRFCKE++
Sbjct:   53 PEGIEALCSDLKVEHTDVRILMLAWKMKAQKQGYFTQEEWRTGLKALRSDTLNKLKKALPELEKEVGTPGNFEDFYSYAFRYCLTEEKQKSVDIESICELLDLVLGSQFRSKIDSLIEYLKIQSDYKVINLDQWMNFLRFCKEIS 197

HSP 2 Score: 63.1586 bits (152), Expect = 1.285e-7
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = -1 
Query:  372 NFESLLEQISFPDLENYDAIQAWPLILDNYVEWMREKH 485
            NF    ++ISFPD ENYDA QAWPLILDN+V+WM+EK 
Sbjct:  188 NFLRFCKEISFPDFENYDATQAWPLILDNFVDWMKEKE 225
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A0D2TJV7_GOSRA (Defective in cullin neddylation protein OS=Gossypium raimondii GN=B456_009G053700 PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 2.756e-61
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = -1 
Query:  813 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDY 1190
            PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVDSLSKLKKALSDLEKEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKV + +
Sbjct:   55 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVDSLSKLKKALSDLEKEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVGSQF 180
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 22
Match NameE-valueIdentityDescription
DCNL5_RAT1.608e-1936.99DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d... [more]
DCNL4_HUMAN1.642e-1940.14DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=... [more]
DCNL5_MOUSE1.714e-1936.99DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=... [more]
DCNL5_BOVIN1.723e-1936.99DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 ... [more]
DCNL5_HUMAN1.897e-1936.99DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=... [more]
DCNL4_MOUSE5.973e-1939.73DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=... [more]
DCNL5_PONAB1.043e-1836.30DCN1-like protein 5 OS=Pongo abelii GN=DCUN1D5 PE=... [more]
DCNL4_DANRE1.220e-1839.46DCN1-like protein 4 OS=Danio rerio GN=dcun1d4 PE=3... [more]
DCN1M_DICDI1.832e-1637.93DCN1-like protein 2 OS=Dictyostelium discoideum GN... [more]
DCNL3_RAT1.920e-1034.04DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2RUI0_GOSRA1.707e-10999.46Defective in cullin neddylation protein OS=Gossypi... [more]
A0A0B0ME22_GOSAR2.767e-77100.00Defective in cullin neddylation protein OS=Gossypi... [more]
A0A0D2RUH3_GOSRA3.689e-7794.08Defective in cullin neddylation protein OS=Gossypi... [more]
A0A0D2R5X8_GOSRA2.774e-7082.17Defective in cullin neddylation protein OS=Gossypi... [more]
A0A0B0PD05_GOSAR1.869e-6882.24Defective in cullin neddylation protein OS=Gossypi... [more]
A0A0D2V8L7_GOSRA7.013e-6881.58Defective in cullin neddylation protein OS=Gossypi... [more]
A0A061GJB0_THECC2.877e-6581.88Defective in cullin neddylation protein (Fragment)... [more]
A0A061GIC4_THECC1.324e-6481.88Defective in cullin neddylation protein OS=Theobro... [more]
A0A067L3H3_JATCU2.697e-6280.69Defective in cullin neddylation protein OS=Jatroph... [more]
A0A0D2TJV7_GOSRA2.756e-6196.83Defective in cullin neddylation protein OS=Gossypi... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005176Potentiating neddylation domainPFAMPF03556Cullin_bindingcoord: 57..153
e-value: 1.6E-15
score: 57.5
IPR005176Potentiating neddylation domainPROSITEPS51229DCUN1coord: 1..170
score: 28.284
IPR014764Defective-in-cullin neddylation proteinPANTHERPTHR12281RP42 RELATEDcoord: 4..148
NoneNo IPR availablePANTHERPTHR12281:SF12DEFECTIVE IN CULLIN NEDDYLATION PROTEINcoord: 4..148

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0093379 ID=g.barbadense_cottongen_reftransV1_0093379; Name=g.barbadense_cottongen_reftransV1_0093379; organism=Gossypium barbadense; type=contig; length=2972bp
CCTTCATTGAGTAACAAATCTTTTTCTTTTCTTTATTTTTTTTTGCTTAA
AATAACAAACTGTAAAAAGGAAAAAGGAACTATTAATGAATGCTGAATGT
ATAAACCATCGGAGGACAACAAAATTGCAGCTTTAACCAGAGAAAAAGGT
TCAGTAAAATCAGTTTAATCAGTTATGATATGAGCCAAGCTCCAAGGTTG
CTGTGGTTAGGTTTTCCACAAGGTCTTGTCCTGTCGACAAATTAATCAAA
ATGAAAATTTTATAGTTCTTTAATACATTCAAGGGCATAACATCTAAGGG
ACACACAGAGAAAGCATTTACCATATGAAATCAGCAATCTGCAAGACATA
CAAAAAATGGCAACACTAGCTATGCTTTTCTCTCATCCATTCAACATAAT
TATCAAGGATCAAGGGCCAAGCTTGGATTGCATCATAGTTTTCAAGATCT
GGAAAGCTAATCTGTTCTAGCAAAGATTCAAAGTTATTATAGATGCCTCA
AGGTTGCTTGAGGAAAAAGAAAATTATGATAATAAAAGAAACTAATGCCT
TTTCATCAAATATCAAGTACATACGTCAAGCATGTGAAATCTAGCATGTA
TTATTCATATTTTTACATGTCATTTTCTTTTCTTAGTTTTTCTTCATTCT
GGCAGCCAACACTGACTTCCAATGCAGATGGAAAGAAACTTTATGGTATT
GAGTTATGGCGGCAAATGGGAAAATAAAATTAGCAAACTTGTACATTTCC
AAAAGGTTTACCTCCTTGCAAAAACGTAGAAAATTTATCCACTGGTCTGA
ATTTATTACTTTGTAATCATTCTGGACCTTCAGATATTCAATTAGTGAAT
CAATCTGAGGACGAAATTGAACCCCTAGAACAAGATTCAACAATTCACAG
ATGCTTTCTATGTCCACACTCTTTTGCTTCTCCTCTGTCAAACAGTATCG
AAATGCATAGGTATAGAAATCCTCATAATTGGATGGCTTCTCCACCTCTT
TCTCCAAATCAGAGAGCGCCTTCTTTAGTTTGCTAAGTGAATCAACCCCC
AATGCTTTAAGGCCTGTTTGCCACTCATCCTGGGTAAAATAGCCCTGCTT
TTCAGCTTTTAGTTTCCAAGCGAGCATCAATATCCTGACATCAGTGTAGT
CCACTCCTAGATCTGAACAGAGTGCTTCAATACCTTCTGGACTGCTCAAG
CAAACTAAGGGTATTAAAAAAAAGATATGTATGTAATTCTGTAAAGAAAA
TCATTCTTTGTGCATCCATGGGACTTGTCTTCAATTGTTTCATACAAATT
AGGTTTGCATCTGTGTGACCTCACATCAAACTAATCAGACAAAAGGAAGT
CCTAAGCATTTGTCGGTAAGTACCATGATATGAAATATAACTCTATGTAT
CATGCAATAACATATGAGACATTATGTTCAAACAACAATTATGAATAATG
TAATTCCTTTAAGAACCAAAAGCTGAGAGAGATGCTTGACCTTGAAAAAT
GATAGCAGCATGATTTGGATAAGTATAATAATTTTATTTGACATTTTCTT
TTGTATTTATAAATAATTACACCAATTGATCATTGAGCAAGAGCAAGAAG
TTCATATCACCATATCAGTAACTCTAAAAATATAAAAGAATGCAGACAAT
AAGTACTTACTCAATCATGCCAAAGGAACTATTTGCATATGTATTGAACA
AGCGATCTATTTTTTCCAGCCCCTTTATTTTAGCTTTACTTGAGACTGAA
ACAAAGAGTAGCATTATCTAATAAGAATACCGGGCACCTCACAAGAAAAA
CCCGAAAACTTAGTCGATTAAATATTAGGGGACCATCATTACCATTACTG
TATCCAACTAACATTCAAGTCAGATAGCAATTTGAATGCCGGTTCATGTC
ATTTTCAGAAGCAAACGTCATGCAATTAATTCTCTATAAAAATTATCAAT
ATTCTACATATCAACCTTCTCAGAATGCCACTTTAGTTATTATTAAACCC
TATAAGGCTATTCACACACCAGTTAGGGGACCGAAAAGACACGAATCCTA
CTGACAACAGGAAAACGAGTCCAAGTTGGGCTCATTACATGGAGAACCAT
CATGAACAAAAAGCAAAATCCTTTTCAATAGTTTGAACCTATGTCTTCCT
CACTCCTAGCATTAACTTTCAGCTCTAATGCTAAAAGGCCCTATTTTTTA
TCTCCCTCATACGCTATTTTCCCTAACTTGCTGTGAAAAAGAACCTGTAA
TATTAATTATAATATTGATAAATCCCAGGAGATATGTTCAATAATTCAAT
CAAAGAACGAATCAGATTTATATGGCCATCGATTGATTTAGACTGTATCC
TAAGAAGCTTCCTAGCCTAAAAAAGGAGAAGATTTAACAGAAGATGATTA
AAATATAGTTAGTGCACAATTCTTCAATTTAACGTATTCTCTTTTCCCGC
GGTTTCTGAGAAGCTAATCTGAGTGGAGCAGTCGTCATTCACACACCGAC
AAACCAAAATAAAATAAAAGAGAGTAAATAACAATGATTACTGTTAAGAA
ATAATGGGGTATTGTACGATTTTCGCTTAAATTCTTTTACTTTCATTGAT
CTTTTTCCCGCGCTTTCTCGGTTACCAAACAATAAAACACATAAAAATCA
CTTTTTTTAAGGGAAAAAATAAAATAAGAAAAGGAGAGGGATGTACCAGA
ACGACCGTCGGATGACGTGACGGATGAGGAATTGGGTGGGGCAGATTTAC
GCTTAGATGCGCGGGGAGGCATTGGTGACAAAAGAGATCGGACTGAAGCC
AATGATGGAACAACCACAGCCACTCGATTTGATGACCAATGACCAATTGA
CTGAAGAGGAAAAAGAAACCCAGAACCCTAGATCCAATGATATTTAGAGA
GAGGCAGCGAGACTGTACTAACACAACAGACTAACACAAGATAGAGATAG
AGATAGAGATAGAGATATAATT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR005176PONY_dom
IPR014764DCN-prot