rna-gnl|WGS:VKDL|Gobar.D01G009800.1, rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1 (mRNA) Gossypium barbadense

Transcript Overview
Namerna-gnl|WGS:VKDL|Gobar.D01G009800.1
Unique Namerna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1
TypemRNA
OrganismGossypium barbadense (Sea Island cotton)
Producthypothetical protein
Cross References
External references for this mRNA
DatabaseAccession
PhytozomeGobar.D01G009800
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018215.1chromosomeCM018215.1:675411..677668 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
bhhgsL1286Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gbhgsL0012Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
bhhgsL4773Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
gbhgsL0580Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
gbhgsL0704Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
ghhgsL0014Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghhgsL0581Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gbhgsL2254Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
ghhgsL0703Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghhgsL2260Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
grbhgsL0024Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
hgshgsL0013Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
grbhgsL0576Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
hgshgsL0634Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hgshgsR0805Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hgshjR0902Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hgshjR0923Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hgshjR0929Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hgshjR0986Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hgshjR0987Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hgshnR0935Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hgshnR0953Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hgshnR0955Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hgshnR0960Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hgshnR1021Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hgsrbR0875Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
hgsrbR0877Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
hgsrbR0944Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
hgsrjR0530Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
hgshzR0804Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hgshzR0830Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hgshzR0835Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hgshzR0885Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hgstoR0661Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hgstoR0688Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hgstoR0731Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
gdhgsL0012Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdhgsL0568Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdhgsL0688Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
gdhgsL2266Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
hgshwR0661Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hgshwR0699Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hgshwR0700Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hgstwR0814Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hgstwR0838Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hgstwR0843Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hgstwR0893Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hgstwR0894Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
hgsuhR0629Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
hgsuhR0649Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
hgsuhR0655Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
hgsndmR0817Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hgsndmR0843Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hgsndmR0848Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hgsndmR0902Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hgsndmR0903Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hgspimR0842Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
hgspimR0870Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
hgspimR0873Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
hgspimR0877Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
hgspimR0931Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
hgspimR0932Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
d3khgsL0366Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
d3khgsL0607Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
d3khgsL0923Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
d3khgsL1176Gossypium klotzschianum (D3-k) genome ISU_v1Gossypium klotzschianum
gszhgsL0483Gossypium stocksii (E1) genome ZSTU_v1Gossypium stocksii
gszhgsL0604Gossypium stocksii (E1) genome ZSTU_v1Gossypium stocksii
gszhgsL1423Gossypium stocksii (E1) genome ZSTU_v1Gossypium stocksii
hgsjmbR0848Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hgsjmbR0877Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hgsjmbR0883Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hgsjmbR0941Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
hgsjmbR0942Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
d8chgsL0944Gossypium trilobum (D8) genome CRI_v1Gossypium trilobum
d8chgsL1050Gossypium trilobum (D8) genome CRI_v1Gossypium trilobum
hgspscR0811Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hgspscR0827Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hgspscR0828Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hgspscR0832Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hgspscR0836Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
hgspscR0889Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
adyhgsL0018Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhgsL0686Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyhgsL2017Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
g2bhgsL0012Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
g2bhgsL0414Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
g2bhgsL0556Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
g2bhgsL0672Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
azbhgsL0014Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
azbhgsL0416Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
azbhgsL0560Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
azbhgsL0681Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
azbhgsL2031Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
azbhgsL2174Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
hgsyumR0804Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
hgsyumR0833Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
hgsyumR0835Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
hgsyumR0839Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
hgsyumR0887Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
hgsyumR0888Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
g7ihgsL0013Gossypium barbadense (AD2) 'Giza7' genome HAU_v1Gossypium barbadense
g7ihgsL0429Gossypium barbadense (AD2) 'Giza7' genome HAU_v1Gossypium barbadense
g7ihgsL0569Gossypium barbadense (AD2) 'Giza7' genome HAU_v1Gossypium barbadense
g7ihgsL0689Gossypium barbadense (AD2) 'Giza7' genome HAU_v1Gossypium barbadense
g7ihgsL2181Gossypium barbadense (AD2) 'Giza7' genome HAU_v1Gossypium barbadense
azkhgsL0014Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
azkhgsL0415Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
azkhgsL0556Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
azkhgsL0676Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
azkhgsL2152Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
a3zhgsL0013Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a3zhgsL0421Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a3zhgsL0566Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a3zhgsL0685Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a3zhgsL2181Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a6zhgsL0442Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a6zhgsL0581Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a6zhgsL0583Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a6zhgsL0672Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a6zhgsL2003Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a6zhgsL2152Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
g7bhgsL0011Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
g7bhgsL0561Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
g7bhgsL0678Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
g7bhgsL2150Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
hgsj1hR0838Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
hgsj1hR0862Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
hgsj1hR0865Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
hgsj1hR0869Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
hgsj1hR0877Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
hgsj1hR0920Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
hgsj1hR0921Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
ceghgsL0013Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
ceghgsL0417Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
ceghgsL0562Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
ceghgsL0677Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
ceghgsL2045Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
ceghgsL2187Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
hgshpfR0765Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hgshpfR0791Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hgshpfR0795Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hgshpfR0846Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hgshpfR0848Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
Gohir.D13G045500.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
GH_A01G00099_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
GhM_D13G0493.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
GH_D13G0455Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
mk-Dt_13-augustus-gene-5.74-mRNA-1Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
GH_D01G00096_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Gorai.002G010300.4Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
rna-gnl|WGS_VKGE|Gotom.A01G010900.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
Gh_D13G0453Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Ghi_D13G02316Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
GhirPD1301T043300.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-gnl|WGS:VKDL|Gobar.A01G008900.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
GbM_D13G0482.1Gossypium barbadense (AD2) 'Pima90' genome HEAU_v1Gossypium barbadense
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-ES319_D01G009800v1gene-ES319_D01G009800v1_HGS-AD2_v1.1Gossypium barbadensegene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1Gossypium barbadensepolypeptide
rna-gnl|WGS:VKDL|Gobar.D01G009800.1rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1-proteinGossypium barbadensepolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-KAB2043347.1cds-KAB2043347.1_HGS-AD2_v1.1Gossypium barbadenseCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-gnl|WGS:VKDL|Gobar.D01G009800.1-8exon-gnl|WGS:VKDL|Gobar.D01G009800.1-8_HGS-AD2_v1.1Gossypium barbadenseexon
exon-gnl|WGS:VKDL|Gobar.D01G009800.1-7exon-gnl|WGS:VKDL|Gobar.D01G009800.1-7_HGS-AD2_v1.1Gossypium barbadenseexon
exon-gnl|WGS:VKDL|Gobar.D01G009800.1-6exon-gnl|WGS:VKDL|Gobar.D01G009800.1-6_HGS-AD2_v1.1Gossypium barbadenseexon
exon-gnl|WGS:VKDL|Gobar.D01G009800.1-5exon-gnl|WGS:VKDL|Gobar.D01G009800.1-5_HGS-AD2_v1.1Gossypium barbadenseexon
exon-gnl|WGS:VKDL|Gobar.D01G009800.1-4exon-gnl|WGS:VKDL|Gobar.D01G009800.1-4_HGS-AD2_v1.1Gossypium barbadenseexon
exon-gnl|WGS:VKDL|Gobar.D01G009800.1-3exon-gnl|WGS:VKDL|Gobar.D01G009800.1-3_HGS-AD2_v1.1Gossypium barbadenseexon
exon-gnl|WGS:VKDL|Gobar.D01G009800.1-2exon-gnl|WGS:VKDL|Gobar.D01G009800.1-2_HGS-AD2_v1.1Gossypium barbadenseexon
exon-gnl|WGS:VKDL|Gobar.D01G009800.1-1exon-gnl|WGS:VKDL|Gobar.D01G009800.1-1_HGS-AD2_v1.1Gossypium barbadenseexon


Homology
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. Araport11
Match: AT2G14740.2 (| vaculolar sorting receptor 3 | Chr2:6308895-6312303 FORWARD LENGTH=628 | 201606)

HSP 1 Score: 157.147 bits (396), Expect = 3.081e-44
Identity = 72/93 (77.42%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ++NPVL+EEQDAQ GKGSRGDVTILP LVVNNRQYRGKL K AVLKA+C+GFEETTEPA+C S DVE+NECL+N+GGCWQ+K+AN+TAC+  F
Sbjct:  350 LDNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKSAVLKALCSGFEETTEPAICLSTDVESNECLDNNGGCWQDKSANITACKDTF 442
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. Araport11
Match: AT2G14740.1 (| vaculolar sorting receptor 3 | Chr2:6308895-6312303 FORWARD LENGTH=628 | 201606)

HSP 1 Score: 157.147 bits (396), Expect = 3.081e-44
Identity = 72/93 (77.42%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ++NPVL+EEQDAQ GKGSRGDVTILP LVVNNRQYRGKL K AVLKA+C+GFEETTEPA+C S DVE+NECL+N+GGCWQ+K+AN+TAC+  F
Sbjct:  350 LDNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKSAVLKALCSGFEETTEPAICLSTDVESNECLDNNGGCWQDKSANITACKDTF 442
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. Araport11
Match: AT2G14720.2 (| vacuolar sorting receptor 4 | Chr2:6300878-6304156 REVERSE LENGTH=628 | 201606)

HSP 1 Score: 154.836 bits (390), Expect = 1.892e-43
Identity = 70/93 (75.27%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ++NPVL+EEQDAQ GKG+RGDVTILP LVVNNRQYRGKL K AVLKA+C+GFEE+TEPA+C S D+ETNECL+N+GGCWQ+K+AN+TAC+  F
Sbjct:  350 LDNPVLKEEQDAQVGKGTRGDVTILPTLVVNNRQYRGKLEKSAVLKALCSGFEESTEPAICLSTDMETNECLDNNGGCWQDKSANITACKDTF 442
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. Araport11
Match: AT2G14720.1 (| vacuolar sorting receptor 4 | Chr2:6300878-6304156 REVERSE LENGTH=628 | 201606)

HSP 1 Score: 154.836 bits (390), Expect = 1.892e-43
Identity = 70/93 (75.27%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ++NPVL+EEQDAQ GKG+RGDVTILP LVVNNRQYRGKL K AVLKA+C+GFEE+TEPA+C S D+ETNECL+N+GGCWQ+K+AN+TAC+  F
Sbjct:  350 LDNPVLKEEQDAQVGKGTRGDVTILPTLVVNNRQYRGKLEKSAVLKALCSGFEESTEPAICLSTDMETNECLDNNGGCWQDKSANITACKDTF 442
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. Araport11
Match: AT3G52850.1 (| vacuolar sorting receptor homolog 1 | Chr3:19587999-19591690 FORWARD LENGTH=623 | 201606)

HSP 1 Score: 154.451 bits (389), Expect = 3.061e-43
Identity = 71/93 (76.34%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            +ENPVL+ EQ++Q GKGSRGDVTILP LVVNNRQYRGKL KGAVLKA+C+GF+E+TEPA+C + D+ETNECLEN+GGCWQ+KAAN+TACR  F
Sbjct:  345 VENPVLKAEQESQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAMCSGFQESTEPAICLTEDLETNECLENNGGCWQDKAANITACRDTF 437
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. Araport11
Match: AT2G30290.1 (| VACUOLAR SORTING RECEPTOR 2 | Chr2:12912890-12915781 REVERSE LENGTH=625 | 201606)

HSP 1 Score: 144.436 bits (363), Expect = 1.076e-39
Identity = 65/92 (70.65%), Postives = 79/92 (85.87%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ENPVL+EEQ AQ GKGSRGDVTILP +V+NNRQYRGKL + AVLKA+C+GF ETTEP +C + D+ETNECL+N+GGCW++K  N+TACR  F
Sbjct:  350 ENPVLKEEQVAQVGKGSRGDVTILPTIVINNRQYRGKLQRSAVLKALCSGFRETTEPPICLTEDIETNECLQNNGGCWEDKTTNITACRDTF 441
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. Araport11
Match: AT2G30290.2 (| VACUOLAR SORTING RECEPTOR 2 | Chr2:12912569-12915781 REVERSE LENGTH=641 | 201606)

HSP 1 Score: 144.821 bits (364), Expect = 1.077e-39
Identity = 65/92 (70.65%), Postives = 79/92 (85.87%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ENPVL+EEQ AQ GKGSRGDVTILP +V+NNRQYRGKL + AVLKA+C+GF ETTEP +C + D+ETNECL+N+GGCW++K  N+TACR  F
Sbjct:  350 ENPVLKEEQVAQVGKGSRGDVTILPTIVINNRQYRGKLQRSAVLKALCSGFRETTEPPICLTEDIETNECLQNNGGCWEDKTTNITACRDTF 441
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. Araport11
Match: AT1G30900.1 (| VACUOLAR SORTING RECEPTOR 6 | Chr1:10997275-11000543 FORWARD LENGTH=631 | 201606)

HSP 1 Score: 134.42 bits (337), Expect = 5.750e-36
Identity = 61/93 (65.59%), Postives = 76/93 (81.72%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            +EN VL+ EQ  Q G+G RGDVTILP L+VNN QYRGKL + AVLKAIC+GF+E TEP +C SGD+ETNECLE +GGCW++K +N+TAC+  F
Sbjct:  347 VENEVLKAEQALQVGQGDRGDVTILPTLIVNNAQYRGKLERNAVLKAICSGFKERTEPGICLSGDIETNECLEANGGCWEDKKSNVTACKDTF 439
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. Araport11
Match: AT4G20110.1 (| VACUOLAR SORTING RECEPTOR 7 | Chr4:10875567-10878545 FORWARD LENGTH=625 | 201606)

HSP 1 Score: 130.954 bits (328), Expect = 8.489e-35
Identity = 61/92 (66.30%), Postives = 75/92 (81.52%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            EN VL  EQ +Q G+G+RGDVTILP LV+NN QYRG+L + AVLKAICAGF ET+EPA+C +  +ETNECLEN+GGCWQ+  AN+TAC+  F
Sbjct:  349 ENQVLRTEQVSQIGRGNRGDVTILPTLVINNAQYRGRLERTAVLKAICAGFNETSEPAICLNTGLETNECLENNGGCWQDTKANITACQDTF 440
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. Araport11
Match: AT4G20110.2 (| VACUOLAR SORTING RECEPTOR 7 | Chr4:10875567-10878545 FORWARD LENGTH=628 | 201606)

HSP 1 Score: 130.954 bits (328), Expect = 8.612e-35
Identity = 61/92 (66.30%), Postives = 75/92 (81.52%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            EN VL  EQ +Q G+G+RGDVTILP LV+NN QYRG+L + AVLKAICAGF ET+EPA+C +  +ETNECLEN+GGCWQ+  AN+TAC+  F
Sbjct:  352 ENQVLRTEQVSQIGRGNRGDVTILPTLVINNAQYRGRLERTAVLKAICAGFNETSEPAICLNTGLETNECLENNGGCWQDTKANITACQDTF 443
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana OX=3702 GN=VSR3 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.966e-43
Identity = 72/93 (77.42%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ++NPVL+EEQDAQ GKGSRGDVTILP LVVNNRQYRGKL K AVLKA+C+GFEETTEPA+C S DVE+NECL+N+GGCWQ+K+AN+TAC+  F
Sbjct:  350 LDNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKSAVLKALCSGFEETTEPAICLSTDVESNECLDNNGGCWQDKSANITACKDTF 442
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana OX=3702 GN=VSR4 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 1.821e-42
Identity = 70/93 (75.27%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ++NPVL+EEQDAQ GKG+RGDVTILP LVVNNRQYRGKL K AVLKA+C+GFEE+TEPA+C S D+ETNECL+N+GGCWQ+K+AN+TAC+  F
Sbjct:  350 LDNPVLKEEQDAQVGKGTRGDVTILPTLVVNNRQYRGKLEKSAVLKALCSGFEESTEPAICLSTDMETNECLDNNGGCWQDKSANITACKDTF 442
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana OX=3702 GN=VSR1 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 2.947e-42
Identity = 71/93 (76.34%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            +ENPVL+ EQ++Q GKGSRGDVTILP LVVNNRQYRGKL KGAVLKA+C+GF+E+TEPA+C + D+ETNECLEN+GGCWQ+KAAN+TACR  F
Sbjct:  345 VENPVLKAEQESQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAMCSGFQESTEPAICLTEDLETNECLENNGGCWQDKAANITACRDTF 437
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum OX=3888 GN=BP80 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.693e-42
Identity = 72/92 (78.26%), Postives = 81/92 (88.04%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            EN +L+EEQDAQ GKG+RGDVTILP LVVNNRQYRGKL KGAVLKAIC+GFEETT+PAVC S DVETNECL N+GGCWQ+K AN+ AC+  F
Sbjct:  346 ENSILKEEQDAQIGKGTRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTDPAVCLSNDVETNECLTNNGGCWQDKTANIAACKDTF 437
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana OX=3702 GN=VSR2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.035e-38
Identity = 65/92 (70.65%), Postives = 79/92 (85.87%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ENPVL+EEQ AQ GKGSRGDVTILP +V+NNRQYRGKL + AVLKA+C+GF ETTEP +C + D+ETNECL+N+GGCW++K  N+TACR  F
Sbjct:  350 ENPVLKEEQVAQVGKGSRGDVTILPTIVINNRQYRGKLQRSAVLKALCSGFRETTEPPICLTEDIETNECLQNNGGCWEDKTTNITACRDTF 441
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana OX=3702 GN=VSR6 PE=2 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 5.535e-35
Identity = 61/93 (65.59%), Postives = 76/93 (81.72%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            +EN VL+ EQ  Q G+G RGDVTILP L+VNN QYRGKL + AVLKAIC+GF+E TEP +C SGD+ETNECLE +GGCW++K +N+TAC+  F
Sbjct:  347 VENEVLKAEQALQVGQGDRGDVTILPTLIVNNAQYRGKLERNAVLKAICSGFKERTEPGICLSGDIETNECLEANGGCWEDKKSNVTACKDTF 439
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana OX=3702 GN=VSR7 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 8.172e-34
Identity = 61/92 (66.30%), Postives = 75/92 (81.52%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            EN VL  EQ +Q G+G+RGDVTILP LV+NN QYRG+L + AVLKAICAGF ET+EPA+C +  +ETNECLEN+GGCWQ+  AN+TAC+  F
Sbjct:  349 ENQVLRTEQVSQIGRGNRGDVTILPTLVINNAQYRGRLERTAVLKAICAGFNETSEPAICLNTGLETNECLENNGGCWQDTKANITACQDTF 440
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana OX=3702 GN=VSR5 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.055e-29
Identity = 54/93 (58.06%), Postives = 73/93 (78.49%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            +EN VL+ E+  Q G+ +RG VTI P L++NN QYRGKL + AVLKAIC+GF+E TEP++C + D+ETNECL  +GGCWQ+K +N+TAC+  F
Sbjct:  346 VENEVLKAEEAFQLGQENRGIVTIFPTLMINNAQYRGKLERTAVLKAICSGFKERTEPSICLNSDIETNECLIENGGCWQDKRSNVTACKDTF 438
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. NCBI nr
Match: gi|1347680784|gb|PPR84493.1| (hypothetical protein GOBAR_AA36224 [Gossypium barbadense])

HSP 1 Score: 483.411 bits (1243), Expect = 1.364e-171
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 230
            MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE
Sbjct:   80 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 309
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. NCBI nr
Match: gi|1347680783|gb|PPR84492.1| (hypothetical protein GOBAR_AA36223 [Gossypium barbadense])

HSP 1 Score: 488.034 bits (1255), Expect = 3.783e-171
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 230
            MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE
Sbjct:  227 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 456
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. NCBI nr
Match: gi|1344105968|gb|PPD79927.1| (hypothetical protein GOBAR_DD23157 [Gossypium barbadense])

HSP 1 Score: 481.1 bits (1237), Expect = 1.101e-169
Identity = 230/238 (96.64%), Postives = 230/238 (96.64%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSG--------DVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 230
            MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSG        DVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE
Sbjct:  133 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGVMAVTFFTDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 370
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. NCBI nr
Match: gi|1344121494|gb|PPD94272.1| (hypothetical protein GOBAR_DD08695 [Gossypium barbadense])

HSP 1 Score: 315.464 bits (807), Expect = 1.480e-103
Identity = 157/202 (77.72%), Postives = 165/202 (81.68%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSG--------DVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDA 195
            ENPVL+EEQDAQAGKGSRGDVTILP LVVNNRQYRGKL KGAVLKAIC GF+ETTEPAVC SG        DVETNECLEN+GGCWQ+KAANLTACR    EEFVNVSWL+A  SKEMDTVT+KSL SSCYST P W WV  LRN L RQ+ FPWG+YSTLPAVR T GD G NPP EQ  ILHCWVCCHDM  AKQPRED 
Sbjct:  233 ENPVLKEEQDAQAGKGSRGDVTILPTLVVNNRQYRGKLTKGAVLKAICNGFKETTEPAVCLSGVMAVTFFTDVETNECLENNGGCWQDKAANLTACR----EEFVNVSWLMACNSKEMDTVTMKSLTSSCYSTRPGWIWVCILRNYLHRQQKFPWGLYSTLPAVRITSGDSGENPPHEQFCILHCWVCCHDMLEAKQPREDV 430
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. NCBI nr
Match: gi|763744851|gb|KJB12290.1| (hypothetical protein B456_002G010300 [Gossypium raimondii])

HSP 1 Score: 176.792 bits (447), Expect = 9.896e-49
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRI 91
            MENPVL+EEQDAQ GKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR+
Sbjct:  351 MENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRL 441
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. NCBI nr
Match: gi|763744856|gb|KJB12295.1| (hypothetical protein B456_002G010300 [Gossypium raimondii])

HSP 1 Score: 175.637 bits (444), Expect = 1.003e-48
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            MENPVL+EEQDAQ GKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR  F
Sbjct:  351 MENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRDTF 443
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. NCBI nr
Match: gi|728835628|gb|KHG15071.1| (Vacuolar-sorting receptor 3 -like protein [Gossypium arboreum])

HSP 1 Score: 173.711 bits (439), Expect = 1.973e-48
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            MENPVL+EEQDAQ GKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR  F
Sbjct:  140 MENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRDTF 232
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. NCBI nr
Match: gi|763746806|gb|KJB14245.1| (hypothetical protein B456_002G116200, partial [Gossypium raimondii])

HSP 1 Score: 171.785 bits (434), Expect = 2.300e-48
Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ENPVL+EEQDAQAGKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAIC GF+ETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR  F
Sbjct:  215 ENPVLKEEQDAQAGKGSRGDVTILPALVVNNRQYRGKLAKGAVLKAICNGFKETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRDTF 306
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. NCBI nr
Match: gi|823137846|ref|XP_012468732.1| (PREDICTED: vacuolar-sorting receptor 3-like [Gossypium raimondii])

HSP 1 Score: 170.629 bits (431), Expect = 4.041e-48
Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ENPVL+EEQDAQAGKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAIC GF+ETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR  F
Sbjct:  214 ENPVLKEEQDAQAGKGSRGDVTILPALVVNNRQYRGKLAKGAVLKAICNGFKETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRDTF 305
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. NCBI nr
Match: gi|763746807|gb|KJB14246.1| (hypothetical protein B456_002G116200, partial [Gossypium raimondii])

HSP 1 Score: 172.17 bits (435), Expect = 6.200e-48
Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ENPVL+EEQDAQAGKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAIC GF+ETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR  F
Sbjct:  215 ENPVLKEEQDAQAGKGSRGDVTILPALVVNNRQYRGKLAKGAVLKAICNGFKETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRDTF 306
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy TrEMBL
Match: A0A2P5W074_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA36224 PE=4 SV=1)

HSP 1 Score: 483.411 bits (1243), Expect = 1.146e-171
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 230
            MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE
Sbjct:   80 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 309
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy TrEMBL
Match: A0A2P5W073_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA36223 PE=4 SV=1)

HSP 1 Score: 488.034 bits (1255), Expect = 3.178e-171
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 230
            MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE
Sbjct:  227 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 456
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy TrEMBL
Match: A0A2P5QZF7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD23157 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 9.248e-170
Identity = 230/238 (96.64%), Postives = 230/238 (96.64%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSG--------DVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 230
            MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSG        DVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE
Sbjct:  133 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGVMAVTFFTDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGSCRLRQYLHREMRHEELMIISNDTIIAVIQE 370
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy TrEMBL
Match: A0A2P5S5E9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD08695 PE=4 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.243e-103
Identity = 157/202 (77.72%), Postives = 165/202 (81.68%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSG--------DVETNECLENDGGCWQEKAANLTACRIHFEEEFVNVSWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGMYSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDA 195
            ENPVL+EEQDAQAGKGSRGDVTILP LVVNNRQYRGKL KGAVLKAIC GF+ETTEPAVC SG        DVETNECLEN+GGCWQ+KAANLTACR    EEFVNVSWL+A  SKEMDTVT+KSL SSCYST P W WV  LRN L RQ+ FPWG+YSTLPAVR T GD G NPP EQ  ILHCWVCCHDM  AKQPRED 
Sbjct:  233 ENPVLKEEQDAQAGKGSRGDVTILPTLVVNNRQYRGKLTKGAVLKAICNGFKETTEPAVCLSGVMAVTFFTDVETNECLENNGGCWQDKAANLTACR----EEFVNVSWLMACNSKEMDTVTMKSLTSSCYSTRPGWIWVCILRNYLHRQQKFPWGLYSTLPAVRITSGDSGENPPHEQFCILHCWVCCHDMLEAKQPREDV 430
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy TrEMBL
Match: A0A0D2QYI9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G010300 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.313e-49
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRI 91
            MENPVL+EEQDAQ GKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR+
Sbjct:  351 MENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRL 441
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy TrEMBL
Match: A0A0D2QYJ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G010300 PE=4 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 8.427e-49
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            MENPVL+EEQDAQ GKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR  F
Sbjct:  351 MENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRDTF 443
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy TrEMBL
Match: A0A0B0NVE2_GOSAR (Vacuolar-sorting receptor 3-like protein OS=Gossypium arboreum OX=29729 GN=F383_18366 PE=4 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.658e-48
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            MENPVL+EEQDAQ GKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR  F
Sbjct:  140 MENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRDTF 232
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy TrEMBL
Match: A0A0D2R4D8_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_002G116200 PE=4 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.932e-48
Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ENPVL+EEQDAQAGKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAIC GF+ETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR  F
Sbjct:  215 ENPVLKEEQDAQAGKGSRGDVTILPALVVNNRQYRGKLAKGAVLKAICNGFKETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRDTF 306
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy TrEMBL
Match: A0A0D2QBI0_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_002G116200 PE=4 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 5.208e-48
Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 0 
Query:    2 ENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            ENPVL+EEQDAQAGKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAIC GF+ETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR  F
Sbjct:  215 ENPVLKEEQDAQAGKGSRGDVTILPALVVNNRQYRGKLAKGAVLKAICNGFKETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRDTF 306
[Close]
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy TrEMBL
Match: A0A1U8M594_GOSHI (vacuolar-sorting receptor 3 isoform X3 OS=Gossypium hirsutum OX=3635 GN=LOC107934139 PE=4 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.657e-47
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 
Query:    1 MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHF 93
            MENPVL+EEQDAQ GKGSRGDVTILP LVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVC SGDVETNECLEN+GGCWQ+KAANLTACR  F
Sbjct:  299 MENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLAKGAVLKAICAGFEETTEPAVCLSGDVETNECLENNGGCWQDKAANLTACRDTF 391
The following BLAST results are available for this feature:
BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. Araport11
Analysis Date: 2019-11-12 (BLASTP of HGS_v1.1 Gossypium barbadense proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT2G14740.23.081e-4477.42| vaculolar sorting receptor 3 | Chr2:6308895-6312... [more]
AT2G14740.13.081e-4477.42| vaculolar sorting receptor 3 | Chr2:6308895-6312... [more]
AT2G14720.21.892e-4375.27| vacuolar sorting receptor 4 | Chr2:6300878-63041... [more]
AT2G14720.11.892e-4375.27| vacuolar sorting receptor 4 | Chr2:6300878-63041... [more]
AT3G52850.13.061e-4376.34| vacuolar sorting receptor homolog 1 | Chr3:19587... [more]
AT2G30290.11.076e-3970.65| VACUOLAR SORTING RECEPTOR 2 | Chr2:12912890-1291... [more]
AT2G30290.21.077e-3970.65| VACUOLAR SORTING RECEPTOR 2 | Chr2:12912569-1291... [more]
AT1G30900.15.750e-3665.59| VACUOLAR SORTING RECEPTOR 6 | Chr1:10997275-1100... [more]
AT4G20110.18.489e-3566.30| VACUOLAR SORTING RECEPTOR 7 | Chr4:10875567-1087... [more]
AT4G20110.28.612e-3566.30| VACUOLAR SORTING RECEPTOR 7 | Chr4:10875567-1087... [more]
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BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy Swiss-Prot
Analysis Date: 2019-11-12 (BLASTP of HGS_v1.1 Gossypium barbadense proteins vs UniProt Swissprot)
Total hits: 8
Match NameE-valueIdentityDescription
VSR3_ARATH2.966e-4377.42Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR4_ARATH1.821e-4275.27Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR1_ARATH2.947e-4276.34Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
VSR1_PEA6.693e-4278.26Vacuolar-sorting receptor 1 OS=Pisum sativum OX=38... [more]
VSR2_ARATH1.035e-3870.65Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR6_ARATH5.535e-3565.59Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
VSR7_ARATH8.172e-3466.30Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
VSR5_ARATH2.055e-2958.06Vacuolar-sorting receptor 5 OS=Arabidopsis thalian... [more]
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BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. NCBI nr
Analysis Date: 2019-11-14 (BLASTP of HGS_v1.1 Gossypium barbadense proteins vs NCBI nr)
Total hits: 10
Match NameE-valueIdentityDescription
gi|1347680784|gb|PPR84493.1|1.364e-171100.00hypothetical protein GOBAR_AA36224 [Gossypium barb... [more]
gi|1347680783|gb|PPR84492.1|3.783e-171100.00hypothetical protein GOBAR_AA36223 [Gossypium barb... [more]
gi|1344105968|gb|PPD79927.1|1.101e-16996.64hypothetical protein GOBAR_DD23157 [Gossypium barb... [more]
gi|1344121494|gb|PPD94272.1|1.480e-10377.72hypothetical protein GOBAR_DD08695 [Gossypium barb... [more]
gi|763744851|gb|KJB12290.1|9.896e-4992.31hypothetical protein B456_002G010300 [Gossypium ra... [more]
gi|763744856|gb|KJB12295.1|1.003e-4891.40hypothetical protein B456_002G010300 [Gossypium ra... [more]
gi|728835628|gb|KHG15071.1|1.973e-4891.40Vacuolar-sorting receptor 3 -like protein [Gossypi... [more]
gi|763746806|gb|KJB14245.1|2.300e-4890.22hypothetical protein B456_002G116200, partial [Gos... [more]
gi|823137846|ref|XP_012468732.1|4.041e-4890.22PREDICTED: vacuolar-sorting receptor 3-like [Gossy... [more]
gi|763746807|gb|KJB14246.1|6.200e-4890.22hypothetical protein B456_002G116200, partial [Gos... [more]
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BLAST of rna-gnl|WGS:VKDL|Gobar.D01G009800.1 vs. ExPASy TrEMBL
Analysis Date: 2019-11-18 (BLASTP of HGS_v1.1 Gossypium barbadense proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2P5W074_GOSBA1.146e-171100.00Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A2P5W073_GOSBA3.178e-171100.00Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A2P5QZF7_GOSBA9.248e-17096.64Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A2P5S5E9_GOSBA1.243e-10377.72Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A0D2QYI9_GOSRA8.313e-4992.31Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A0D2QYJ3_GOSRA8.427e-4991.40Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A0B0NVE2_GOSAR1.658e-4891.40Vacuolar-sorting receptor 3-like protein OS=Gossyp... [more]
A0A0D2R4D8_GOSRA1.932e-4890.22Uncharacterized protein (Fragment) OS=Gossypium ra... [more]
A0A0D2QBI0_GOSRA5.208e-4890.22Uncharacterized protein (Fragment) OS=Gossypium ra... [more]
A0A1U8M594_GOSHI1.657e-4791.40vacuolar-sorting receptor 3 isoform X3 OS=Gossypiu... [more]
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InterPro
Analysis Name: InterProScan Analysis for HGS_v1.1 Gossypium barbadense proteins
Date Performed: 2019-11-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 2..96
NoneNo IPR availablePANTHERPTHR22765:SF54VACUOLAR-SORTING RECEPTOR 3-RELATEDcoord: 2..96

Sequences
The following sequences are available for this feature:

protein sequence of rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1

>rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1 ID=rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1; Name=rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1; organism=Gossypium barbadense; type=polypeptide; length=230bp
MENPVLEEEQDAQAGKGSRGDVTILPRLVVNNRQYRGKLAKGAVLKAICA
GFEETTEPAVCSSGDVETNECLENDGGCWQEKAANLTACRIHFEEEFVNV
SWLIASKSKEMDTVTVKSLASSCYSTCPDWTWVYFLRNDLRRQRNFPWGM
YSTLPAVRSTGGDIGGNPPREQLRILHCWVCCHDMFNAKQPREDACFKGS
CRLRQYLHREMRHEELMIISNDTIIAVIQE
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mRNA from alignment at CM018215.1:675411..677668-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1 ID=rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1; Name=rna-gnl|WGS:VKDL|Gobar.D01G009800.1; organism=Gossypium barbadense; type=mRNA; length=2258bp; location=Sequence derived from: CM018215.1:675411..677668- (Gossypium barbadense
GTGGGACTATGTGACTGATTTTGAAATAAGATGGCCAATGAAGTAGAAAA
GATATAATAAGGAATGTGCAGACGGTGTTATCAAATCTCTTGGTAAACAG
TTAATTGGAAGATCCTCGGTTTATCTTCAAATTTCTGTTAGTATTAATAG
CACAGTGAAAACTCAAAATCTTGCTGGAAACTAGTAATAAATTGATGATA
TTCCTTTGTCATCCATTCAGGGCTTGACGCTAAAAAGATCGAAAAGTGTT
TGGGAGATCCAGATGCTGATATGGAGAATCCTGTTCTGGAAGAAGAACAA
GATGCTCAAGTAGTCCTCTCAGGCTAAGATATTTTATGTTTCACTACTCT
TTTTCCAATTCGTTGTCTTCTTTGACCTTTTTGAGGCTATTTAATAGAAA
CATTTTCATAGGCGGGGAAAGGATCTAGAGGAGATGTTACCATATTGCCT
AGACTTGTTGTCAACAATCGCCAATATCGAGGTTCGTATTTATACCCGTA
TTTCCCAGATAAAATTTTGGGTGCTTTCCGCGTTTAACATATCTGCATGC
AGGAAAGCTGGCCAAAGGTGCTGTTTTGAAGGCCATATGTGCCGGCTTCG
AGGAGACTACTGAACCAGCTGTTTGTTCGAGTGGTGGTGAGTTTGTCTTG
TTTTATTTTTCTTGCAAGAGAAGTATTTTAGTCTGGTTCCACTTAGGGGT
GCTGACTCTTTACCTCTCTTGAGAACCCGTGTCTGACACGTTTTCATAGA
CGAGTATGGGGATGTGACCCTCCAAAAACACTCTGAATACAGGGAAAATG
AAGAACAACTTGCACATGTCCATGTCAGACATATGTCTTATCCAACTCTC
ACACTAAGTAACATAGGCGAGAGCTAGGCTTTTAGAAATCCAGTGTAGTG
TTTCAACTTACTGTCCAGTTGTTATTTGAAACACCAGTGATGGCGGTTAC
TTTTTTCACAGATGTGGAGACGAATGAATGCTTGGAAAATGATGGTGGTT
GTTGGCAAGAAAAAGCAGCAAATCTCACAGCCTGCAGGGTATGAATCGAA
ACAGATTTGATAGGGATTCTCTACTCCATGAGCTTATTTGAATATATTGA
TTTTCTTCTTAAGATACATTTCGAGGAAGAGTTTGTGAATGTCTCTTGGT
TGATAGCGAGCAAATCAAAGGAGATGGATACAGTCACTGTGAAGGTGAGA
ATCAAGATTTTATTTGCACGGTTTAAGTGTTTACTTCGATGTTAATGTTT
AAAATATGAAGTTAAAGGTTTAGTGTTCATTTGTGATTCATGACATCTGA
GAAAGAACATTGACAATCAGAATATTTGGGATGGTTAGGAAGAATTTAGA
TTATTAGGAAGAATTCTAAAAAAAGGACAAGACATTAGACATTTTCCATG
TAGTTTGGCATGACAAATTCATTTCAAATTATTTTGATTACTTATAGAAA
TGTTCTTTTAATTTTGCATTCAATCAAATTTTGGCATTATAGTTTGGCAT
CTTAATTAGGCAGTTTGGTAGTTTGGCATGACAATCAAAGTGTATATAAC
ACCGATATCAAGCAGTGCAAAAAAATCATTATCAAATCAAATCAAATATA
TACATAATGGGGGGGAAATCATTGGCGTTGATGTTCTGTTTGCTGTTGTT
GATCCTTGTTAGTCCCTCGCGTCAAGCTGTTACAGCACTTGTCCCGATTG
GACTTGGGTATACTTTTTGCGTAACGACTTGCGTCGCCAACGGAACTTCC
CTTGGGGAATGTATTCAACGCTGCCTGCCGTCAGAAGCACTGGTGGAGAC
ATTGGAGGAAACCCACCTCGCGAGCAGCTCCGTATTCTGCACTGTTGGGT
GTGCTGCCATGACATGTTCAATGCTAAGCAGCCAAGGGAGGATGCCTGGT
AATTTTTCTTTTTCCGTTTTATATTAATATTTGATGGTAAGTAAGTACGT
ATATTAACTTAATGATTTGTTTTGTTTTTGTCAGCTTCAAAGGAAGTTGT
CGGCTGCGTCAATACCTGCATAGAGAGATGCGCCATGAAGAACTGATGAT
AATCAGTAATGATACAATTATTGCCGTTATCCAAGAATAATGTGATGTTC
CTTTGTTGTTTTTGTTGAATCCTTCATGTTATATTATTTAACTGTTTTCC
TTATTTTTGGAGGATTTTATGTGCTAAATGCACCGAAAATTTTCTTGATA
TATTTCAATGACATCTATCTATATGTAAAAATAAGTTTTAAATCTATTAA
TTGGTTCA
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Coding sequence (CDS) from alignment at CM018215.1:675411..677668-

>rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1 ID=rna-gnl|WGS:VKDL|Gobar.D01G009800.1_HGS-AD2_v1.1; Name=rna-gnl|WGS:VKDL|Gobar.D01G009800.1; organism=Gossypium barbadense; type=CDS; length=693bp; location=Sequence derived from: CM018215.1:675411..677668- (Gossypium barbadense
ATGGAGAATCCTGTTCTGGAAGAAGAACAAGATGCTCAAGCGGGGAAAGG
ATCTAGAGGAGATGTTACCATATTGCCTAGACTTGTTGTCAACAATCGCC
AATATCGAGGAAAGCTGGCCAAAGGTGCTGTTTTGAAGGCCATATGTGCC
GGCTTCGAGGAGACTACTGAACCAGCTGTTTGTTCGAGTGGTGATGTGGA
GACGAATGAATGCTTGGAAAATGATGGTGGTTGTTGGCAAGAAAAAGCAG
CAAATCTCACAGCCTGCAGGATACATTTCGAGGAAGAGTTTGTGAATGTC
TCTTGGTTGATAGCGAGCAAATCAAAGGAGATGGATACAGTCACTGTGAA
GTCCCTCGCGTCAAGCTGTTACAGCACTTGTCCCGATTGGACTTGGGTAT
ACTTTTTGCGTAACGACTTGCGTCGCCAACGGAACTTCCCTTGGGGAATG
TATTCAACGCTGCCTGCCGTCAGAAGCACTGGTGGAGACATTGGAGGAAA
CCCACCTCGCGAGCAGCTCCGTATTCTGCACTGTTGGGTGTGCTGCCATG
ACATGTTCAATGCTAAGCAGCCAAGGGAGGATGCCTGCTTCAAAGGAAGT
TGTCGGCTGCGTCAATACCTGCATAGAGAGATGCGCCATGAAGAACTGAT
GATAATCAGTAATGATACAATTATTGCCGTTATCCAAGAATAA
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