PGML0086, PGML0086 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0086
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TATT)4
Primer 1PGML0086_F: ATTGGGCCTATTTGGGCTT
Primer 2PGML0086_R: CGAATTGGAATTGGGTTGAG
Product Length172
Publication[view all]
CommentBAC_ID=FITB2101.y1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D06chromosomeD06:56720875..56721042 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018220.1chromosomeCM018220.1:51548460..51548627 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_06chromosomeD5_06:49647149..49647320 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_06chromosomeD10_06:11343960..11344131 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr10chromosomeDt_chr10:3781103..3781270 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D06chromosomeD06:52971016..52971183 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D06chromosomeGhir_D06:55209895..55210061 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D06chromosomeD06:54389890..54390057 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D06chromosomeD06:54423136..54423303 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D06chromosomeD06:51694456..51694623 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D06chromosomeGbar_D06:51723774..51723941 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D06chromosomeD06:51931823..51931990 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017628.1chromosomeCM017628.1:52326602..52326769 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017654.1chromosomeCM017654.1:55195136..55195303 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017706.1chromosomeCM017706.1:52250578..52250745 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D06chromosomeD06:55135322..55135489 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr06chromosomeChr06:49413473..49413642 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr10chromosomeChr10:51766775..51766946 -Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_10chromosomeChr_10:35772011..35772467 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr10chromosomeChr10:53381926..53382113 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr10chromosomeChr10:33879212..33879382 -Gossypium aridum (D4) genome ISU_v1n/a
Sequence
>PGML0086 ID=PGML0086; Name=PGML0086; organism=Gossypium raimondii; type=genetic_marker; length=172bp
ATTGGGCCTATTTGGGCTTTTCATAATTTGGTATAACTATATGTGTTATC
CGTATTTTTATACAACAGAATAACTATTTTTTATTTTCAAAAATATATAT
TATTTATTTATTTATTTAGTTTAATTAAATTAATTTTTAATTAAATTATT
TTCTCAACCCAATTCCAATTCG