PGML0085, PGML0085 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0085
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AAAGG)3
Primer 1PGML0085_F: GGAGACATGCTGATTGCCTT
Primer 2PGML0085_R: AAAGAGGGTGTGAGTGGTGG
Product Length269
Publication[view all]
CommentBAC_ID=FITB1997.y1
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D11chromosomeD11:12501692..12501956 +
A11chromosomeA11:13469936..13470203 +
CM018225.1chromosomeCM018225.1:11627068..11627336 +
CM018212.1chromosomeCM018212.1:13111666..13111934 +
D5_11chromosomeD5_11:54507107..54507375 -
Chr11_CRI-A2_v1.0.a1chromosomeChr11_CRI-A2_v1.0.a1:110717887..110718155 -
D10_11chromosomeD10_11:11367278..11367546 +
CM016624.1chromosomeCM016624.1:17462916..17463184 +
Dt_chr7chromosomeDt_chr7:10903912..10904176 +
D11chromosomeD11:12134443..12134707 +
A11chromosomeA11:13185141..13185408 +
Ghir_D11chromosomeGhir_D11:12071879..12072143 +
Ghir_A11chromosomeGhir_A11:13529586..13529853 +
D11chromosomeD11:11810096..11810360 +
A11chromosomeA11:13087115..13087382 +
D11chromosomeD11:12124390..12124654 +
A11chromosomeA11:13274499..13274766 +
D11chromosomeD11:11892787..11893051 +
A11chromosomeA11:13638475..13638742 +
Gbar_D11chromosomeGbar_D11:11902414..11902682 +
Gbar_A11chromosomeGbar_A11:12862452..12862720 +
D11chromosomeD11:11818898..11819166 +
A11chromosomeA11:13127231..13127499 +
CM017633.1chromosomeCM017633.1:11769448..11769716 +
CM017620.1chromosomeCM017620.1:13379524..13379792 +
CM017659.1chromosomeCM017659.1:12036441..12036709 +
CM017646.1chromosomeCM017646.1:13484733..13485001 +
CM017711.1chromosomeCM017711.1:11863338..11863606 +
CM017698.1chromosomeCM017698.1:13349422..13349691 +
D11chromosomeD11:12315735..12315999 +
A11chromosomeA11:13783914..13784181 +
Chr11chromosomeChr11:13902126..13902399 +
Chr11chromosomeChr11:13608892..13609160 +
Chr11chromosomeChr11:51987658..51987926 -
B_11chromosomeB_11:12867971..12868239 +
Chr07chromosomeChr07:11524641..11524909 +
Chr_07chromosomeChr_07:10229617..10229885 +
Chr07chromosomeChr07:11674700..11674968 +
Chr07chromosomeChr07:9217624..9217888 +
Chr07chromosomeChr07:8191548..8191815 +
E11chromosomeE11:14414767..14415035 +
F11chromosomeF11:11485387..11485654 +
Chr11chromosomeChr11:167010498..167010764 -
Sequence
>PGML0085 ID=PGML0085; Name=PGML0085; organism=Gossypium raimondii; type=genetic_marker; length=269bp
GGAGACATGCTGATTGCCTTAAGATTTCACTTGCTTGTGGGTGTGATATG
GTGAGAGCAGAATATATGTGCTTAAAGGAAAGGAAAGGAGGGTCTCTAAT
GTTCTCAAAGCACATGATCCTTATTAAAAGACACAATGATGCATTTGCAC
TATCCTTTGACAATTTCAGCACCCCCAATCTTACCCCCAAACACCACTTA
CCTTAACCCAAATTGCACTGTGTGCCCTCCTCTTTTAAGGAATGTTATCC
CACCACTCACACCCTCTTT