PGML0083, PGML0083 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0083
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(T)16
Primer 1PGML0083_F: GCTCGTACGACAGAGAACCC
Primer 2PGML0083_R: AGCTCAAGTGGGAAACTGGT
Product Length148
Publication[view all]
CommentBAC_ID=FITB2292.y1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D11chromosomeD11:13231466..13231608 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018225.1chromosomeCM018225.1:12320439..12320583 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_11chromosomeD5_11:53796911..53797057 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_11chromosomeD10_11:12014959..12015101 +Gossypium turneri (D10) genome NSF_v1_a2n/a
CM016624.1chromosomeCM016624.1:18853236..18853377 +Gossypium australe (G2) genome CRI_v1.1n/a
D11chromosomeD11:12813559..12813701 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D11chromosomeGhir_D11:12774738..12774880 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D11chromosomeD11:12494835..12494977 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D11chromosomeD11:12827845..12827987 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D11chromosomeD11:12596384..12596526 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D11chromosomeGbar_D11:12607065..12607209 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D11chromosomeD11:12508159..12508303 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017633.1chromosomeCM017633.1:12477475..12477619 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017659.1chromosomeCM017659.1:12772041..12772183 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017711.1chromosomeCM017711.1:12592970..12593114 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D11chromosomeD11:13037919..13038061 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr11chromosomeChr11:51282689..51282836 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr07chromosomeChr07:12255794..12255935 +Gossypium thurberi (D1-5) genome CRI_v1n/a
chr07chromosomechr07:10369174..10369315 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_07chromosomeChr_07:10778236..10778378 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr07chromosomeChr07:12377758..12377903 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr07chromosomeChr07:9743692..9743840 +Gossypium aridum (D4) genome ISU_v1n/a
Chr07chromosomeChr07:8660221..8660362 +Gossypium gossypioides (D6) genome ISU_v1n/a
Sequence
>PGML0083 ID=PGML0083; Name=PGML0083; organism=Gossypium raimondii; type=genetic_marker; length=148bp
GCTCGTACGACAGAGAACCCTATCATTCAAATAAATCCATAAAGCCATCC
TAGAGGGAGAAAGCAAATACATTGTTTTTTTTTTTTTTTTATGGTAATGT
GTCCCTATATGGAGTTAAATACAGAAATACCAGTTTCCCACTTGAGCT