PGML0077, PGML0077 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0077
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(T)18
Primer 1PGML0077_F: GGAGCGGGTAGAGGTAGCTT
Primer 2PGML0077_R: TCGGTAGTGCTTTGGTTTCC
Product Length314
Publication[view all]
CommentBAC_ID=FITB2042.y1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D10chromosomeD10:64275333..64275660 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
D5_10chromosomeD5_10:3340197..3340509 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
scaffold1048.1supercontigscaffold1048.1:285563..285889 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D10chromosomeD10:60300599..60300912 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D10chromosomeGhir_D10:64065771..64066098 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D10chromosomeD10:63415002..63415329 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D10chromosomeD10:62563016..62563341 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D10chromosomeD10:60520270..60520597 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D10chromosomeGbar_D10:61572398..61572726 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D10chromosomeD10:62558461..62558787 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017632.1chromosomeCM017632.1:61524227..61524554 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017658.1chromosomeCM017658.1:64206171..64206499 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017710.1chromosomeCM017710.1:62883343..62883672 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D10chromosomeD10:64236588..64236915 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:58811337..58811650 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Sequence
>PGML0077 ID=PGML0077; Name=PGML0077; organism=Gossypium raimondii; type=genetic_marker; length=314bp
GGAGCGGGTAGAGGTAGCTTTTGGGTTGGGAGGTTAAAACAGGGCATAGA
AATCGAGAGCTGTAAAACGGAAGCTAAACTGAGCTTTTGGAAGAGAATAG
AAAGCAGCCAATTTTGGGAATAGAGGCGTAAATAATAAGCCCGTAATAGG
ACATTACTCCTAACCAAACAGCTGAATAGGTGGGCCCAGAGAATAGGGCA
ACCAAACGAGCTGTGAGTGTTTCTTCTGCCTTTTTTTTTTTTTTTTTTGG
CTTTCTTGGTTCTCAATTTCTCAATTCTATCCACGGTAGTATGGGGAAAC
CAAAGCACTACCGA