PGML0069, PGML0069 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0069
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TTTTA)3
Primer 1PGML0069_F: ATTTGAAGAGAGTGGAGCCG
Primer 2PGML0069_R: ACAACGGGATAATATCAAATCAA
Product Length140
Publication[view all]
CommentBAC_ID=FITB4375.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A06chromosomeA06:11386769..11386903 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
D5_06chromosomeD5_06:8724989..8725128 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_06chromosomeD10_06:51510629..51510762 -Gossypium turneri (D10) genome NSF_v1_a2n/a
At_chr10chromosomeAt_chr10:70866436..70866570 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A06chromosomeA06:9991589..9991723 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A06chromosomeGhir_A06:11537271..11537404 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A06chromosomeA06:10929597..10929731 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A06chromosomeA06:11413057..11413191 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A06chromosomeA06:11363297..11363431 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A06chromosomeGbar_A06:11057974..11058096 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A06chromosomeA06:11113997..11114131 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017615.1chromosomeCM017615.1:11459540..11459674 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017641.1chromosomeCM017641.1:11209140..11209273 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017693.1chromosomeCM017693.1:11421615..11421749 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A06chromosomeA06:11476078..11476212 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr06chromosomeChr06:11306412..11306546 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr06chromosomeChr06:8510657..8510794 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
B_06chromosomeB_06:86288742..86288880 -Gossypium anomalum (B1) genome NSF_v1n/a
Chr10chromosomeChr10:9119076..9119210 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_10chromosomeChr_10:7111326..7111459 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr10chromosomeChr10:9245456..9245590 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr10chromosomeChr10:6463442..6463949 +Gossypium aridum (D4) genome ISU_v1n/a
Sequence
>PGML0069 ID=PGML0069; Name=PGML0069; organism=Gossypium raimondii; type=genetic_marker; length=140bp
ATTTGAAGAGAGTGGAGCCGAGCGTTCCAAAAACATTTTAGATAACTTCT
CTCATACTTTTAACATTTTTCATCTTTTCATTTTATTTTATTTTAATACT
TATATTTAACCATTTTATTGATTTGATATTATCCCGTTGT