PGML0047, PGML0047 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0047
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(T)16
Primer 1PGML0047_F: AATCAAATGGTTGGCGCTAC
Primer 2PGML0047_R: AGGACTCAGCCGAATAACGA
Product Length156
Publication[view all]
CommentBAC_ID=FITB4434.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D09chromosomeD09:48683415..48683568 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018223.1chromosomeCM018223.1:46297366..46297522 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_09chromosomeD5_09:39692544..39692697 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_09chromosomeD10_09:4135112..4135257 -Gossypium turneri (D10) genome NSF_v1_a2n/a
CM016622.1chromosomeCM016622.1:6095638..6095795 -Gossypium australe (G2) genome CRI_v1.1n/a
Dt_chr6chromosomeDt_chr6:4003096..4003250 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D09chromosomeD09:46479894..46480049 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D09chromosomeGhir_D09:48478534..48478689 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D09chromosomeD09:47832376..47832530 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D09chromosomeD09:48218879..48219033 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D09chromosomeD09:46318747..46318901 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D09chromosomeGbar_D09:47177208..47177364 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D09chromosomeD09:49582741..49582897 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017631.1chromosomeCM017631.1:47282870..47283027 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017657.1chromosomeCM017657.1:48744312..48744463 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017709.1chromosomeCM017709.1:47952450..47952602 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D09chromosomeD09:50022317..50022470 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr09chromosomeChr09:45914676..45914829 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr06chromosomeChr06:46610439..46610591 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_06chromosomeChr_06:32409712..32409857 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr06chromosomeChr06:47722004..47722150 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Sequence
>PGML0047 ID=PGML0047; Name=PGML0047; organism=Gossypium raimondii; type=genetic_marker; length=156bp
AATCAAATGGTTGGCGCTACTTCTTTCCTGCTGTTATGTGGGAATCCCAT
CCTATTCACGTTATATAAATGCCTTTGTTTTTTTTTTTTTTTTATTATAA
AAAGAATTTAAATGATTCCCTTCACATTCGTTTTAATCGTTATTCGGCTG
AGTCCT