PGML0024, PGML0024 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0024
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(T)17
Primer 1PGML0024_F: AAATAAGCGAGTTCACTGTAGGTC
Primer 2PGML0024_R: GGTGGGTTTGGAGAAGAAGA
Product Length317
Publication[view all]
CommentBAC_ID=FITB7502.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018215.1chromosomeCM018215.1:61055527..61055841 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_01chromosomeD5_01:54955402..54955718 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_01chromosomeD10_01:1589309..1589620 +Gossypium turneri (D10) genome NSF_v1_a2n/a
D10_01chromosomeD10_01:1618053..1618367 +Gossypium turneri (D10) genome NSF_v1_a2n/a
D10_01chromosomeD10_01:1579110..1579428 -Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr9chromosomeDt_chr9:50930790..50931100 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
scaffold131103supercontigscaffold131103:1..296 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:115849698..115850001 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
scaffold47340_objsupercontigscaffold47340_obj:684..994 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
Gbar_D01chromosomeGbar_D01:61304344..61304658 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A01chromosomeGbar_A01:113840349..113840654 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
scaffold13311_objsupercontigscaffold13311_obj:117..431 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017701.1chromosomeCM017701.1:61723518..61723833 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
CM017701.1chromosomeCM017701.1:61716560..61716873 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
CM017701.1chromosomeCM017701.1:61702304..61702620 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
B_01chromosomeB_01:96315712..96316026 -Gossypium anomalum (B1) genome NSF_v1n/a
Chr02chromosomeChr02:59713649..59713966 -Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_02chromosomeChr_02:40603628..40603939 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr02chromosomeChr02:60551132..60551449 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr02chromosomeChr02:60560549..60560861 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr02chromosomeChr02:60557270..60557584 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
F01chromosomeF01:96856971..96857286 -Gossypium longicalyx (F1) genome NSF_v1n/a
Sequence
>PGML0024 ID=PGML0024; Name=PGML0024; organism=Gossypium raimondii; type=genetic_marker; length=317bp
AAATAAGCGAGTTCACTGTAGGTCTATTATTTCAATTTCGTACTAAAGAA
CAAATGTTTCAAAGAAACATTTATTGTAGAATGGGTTTTTTTTTTTTTTT
TTGCAACTAATAAGTGAAAACGAGTTTTTTATAAGAATTTACTTTTACAA
AAAAACAAGTCGAAATTTTAGAAAATAACAATCTAAATTCTCAAGAAGTT
AATGTAACCTTCAAGATTCGATGATAATATCTAGGTTGGGTTTGGGGTGT
TACACTGATTGAGTTTTTGTTTTTAAATTTATAATACAAAGTGTTATTCT
TCTTCTCCAAACCCACC