NAU2293, NAU2293 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU2293
AliasNAU0882=NAU2293
Genbank IDDT049105
TypeSSR
SpeciesGossypium hirsutum
GermplasmXuzhou 142
Xuzhou 142
Source TypeEST
Repeat MotifGGCAAT(7)
PCR ConditionAnnealing temperature: 57
Primer 1NAU2293_F: ATCATCCATTAGGCACCAAC
Primer 2NAU2293_R: GAGGGAAGAAGCAGCTAACA
Product Length191
Publication[view all]
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDT049105
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A08chromosomeA08:3301214..3301404 .Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1CottonGen marker alignment to genome using primer sequences
Germplasm
Stock NameType
Xuzhou 142accession
Xuzhou 142accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch08_At.08N/A202NAU2293View
2TM-1 x 3-79, RIL (2012)AD_ch08_At.08N/A32.68NAU2293View
3Emian-22 x 3-79, BC1 (2011)AD_ch08_At.08N/A124.09NAU2293View
4TM-1 x 3-79, RIL (2014)AD_ch08_At.08N/A42.4NAU2293View
5TM-1 x Hai-7124, BC1 (2007)AD_ch08_At.08N/A41.6NAU2293-170View
6TM-1 x Hai-7124, BC1 (2008)AD_ch08_At.08N/A87.42NAU2293-170View
7TM-1 x Hai-7124, BC1 (2012)AD_ch08_At.08N/A46.6NAU2293-170View
8TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch08_At.08N/A93.6NAU2293bView
9TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch08_At.08N/A94.4NAU2293aView
10TM-1 x 3-79, RIL (2012.v3)AD_ch08_At.08N/A42.4NAU2293View
11PD 94042 x (AD)4-08, F2 (2016)AD_ch08_At.08N/A97.5NAU2293View