Gh603, Gh603 (genetic_marker) Gossypium hirsutum | Cottongen

Marker Overview

Cross References

Marker Overview


Name	Gh603
Genbank ID	DQ908538
Type	SSR
Species	Gossypium hirsutum
Germplasm	Tamcot Sphinx
Source Type	genomic
Repeat Motif	TCT(11)
Primer 1	Gh603_F: CAAAGTTGTAAACGGGTGAGAAGTC
Primer 2	Gh603_R: ATTAAGTATGCACCCATGTAGTCCC
Publication	[view all]
Comment	Primer data obtained in 2008-01 from Hoffman, Steve M.

Cross References

External references for this genetic_marker


Database	Accession
DB:genbank	DQ908538

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr08	chromosome	Gh603:1..765 . Chr08:21850024..21850782 +		n/a
Chr8	chromosome	Gh603:1..765 . Chr8:57291200..57291958 +		n/a

Publications


Year	Publication
2007	Hoffman S, Yu J, Grum D, Xiao J, Kohel R, Pepper A. Identification of 700 New Microsatellite Loci from Cotton (G. hirsutum L.). Journal of cotton science. 2007; 11(4):208-241

Germplasm


Stock Name	Type
Tamcot Sphinx	accession

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	TM-1 x 3-79, RIL (2012)	AD_ch26_Dt.12	N/A	37.03	GH603	View
2	TM-1 x 3-79, RIL (2014)	AD_ch26_Dt.12	N/A	48.3	GH603	View
3	TM-1 x 3-79, RIL (2012.v3)	AD_ch26_Dt.12	N/A	48.35	GH603	View