UCD_Gh_M_000171, UCD_Gh_M_000171 (genetic_marker) Gossypium hirsutum

Marker Overview
NameUCD_Gh_M_000171
AliasGh_M_000171
Tm1_Mira454_Contig_490_152
Gh_M_000171_Class_I
dbSNP IDN/A
TypeSNP
SNP AllelesA/G
5' Flanking SequenceATCCGGAGTAAACTGAATATTAAATTGAATGCAGCCCTCTTGTGCAGAGAAAATTCTATT ATGACAATTTGCAGCAAGACTAACGCAACACAAAAAAAAG
3' Flanking SequenceATAATAATAATTTCCGCATAAATTCTCACCCGATTAGCAGCTTGTTCTCCTCCAAGAAGC TGTATGTGGGTACCTCTAGATTGTACGGTGCTGGTCCCTT
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
PD-1
Sealand 542
Fibermax 832
TM-1
Source TypeRNA
Publication[view all]
ContactAshrafi, Hamid
Commentclass_I: no only SNPs derived from contigs with no known homeo-SNP positions in the contig within our data set
Contact
NameDetails
Ashrafi, Hamid
First name:Hamid
Last name:Ashrafi
Title:Bioinformatics Specialist
Institution:University of California
Address:1 Shields Ave, Davis, CA 95616
Country:United States
Email:ashrafi@ucdavis.edu
Last update:24-Aug-2014
Germplasm
Stock NameType
Acala Maxxaaccession
PD-1accession
Sealand 542accession
Fibermax 832accession
TM-1accession
Sequence
>UCD_Gh_M_000171 ID=UCD_Gh_M_000171; Name=UCD_Gh_M_000171; organism=Gossypium hirsutum; type=genetic_marker; length=205bp
ATCCGGAGTAAACTGAATATTAAATTGAATGCAGCCCTCTTGTGCAGAGA
AAATTCTATTATGACAATTTGCAGCAAGACTAACGCAACACAAAAAAAAG
[A/G]ATAATAATAATTTCCGCATAAATTCTCACCCGATTAGCAGCTTGT
TCTCCTCCAAGAAGCTGTATGTGGGTACCTCTAGATTGTACGGTGCTGGT
CCCTT