TAMU_GH_TBb094N18r67, TAMU_GH_TBb094N18r67 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb094N18r67
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i32361Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A03chromosomeA03:2984994..2985094 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018204.1chromosomeCM018204.1:3248349..3248449 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:109844868..109844968 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr9chromosomeAt_chr9:63676648..63676748 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A03chromosomeA03:2312403..2312503 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A03chromosomeGhir_A03:4035348..4035448 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A03chromosomeA03:3601258..3601358 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A03chromosomeA03:3878881..3878981 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A03chromosomeA03:3304995..3305095 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A03chromosomeGbar_A03:3262387..3262487 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A03chromosomeA03:3351579..3351679 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017612.1chromosomeCM017612.1:3580243..3580343 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017638.1chromosomeCM017638.1:3889090..3889190 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017690.1chromosomeCM017690.1:3535201..3535301 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A03chromosomeA03:3950721..3950821 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr02chromosomeChr02:3025568..3025668 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:115154302..115154402 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch03_At.03N/A117.8SNPi32361GhView
2HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch03_At.03N/A5.75i32361GhView
33-79 x TM-1, F2 (2015 SNP)AD_ch03_At.03N/A117.34i32361GhView
4Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch03_At.03N/A96.3i32361GhView
Sequence
>TAMU_GH_TBb094N18r67 ID=TAMU_GH_TBb094N18r67; Name=TAMU_GH_TBb094N18r67; organism=Gossypium sp.; type=genetic_marker; length=105bp
TAGATTGACCTATCGTGCTGGTTGAGCCAGGGACTAGAAATACTACTTCG
[A/G]GTCAGGATCTTGGGTGGTTGATCTCTGGATTGACCTATCGTGCTG
GTTGA