TAMU_GH_TBb081G15f391, TAMU_GH_TBb081G15f391 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb081G15f391
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i31079Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A01chromosomeA01:41952314..41952414 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018202.1chromosomeCM018202.1:38830935..38831035 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
At_chr2chromosomeAt_chr2:25540314..25540414 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:40031171..40031271 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:41209238..41209338 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:40643210..40643310 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:40865071..40865171 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:40538423..40538523 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:39143880..39143980 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:39104112..39104212 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:41063921..41064021 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:42599042..42599142 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:39210084..39210184 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:41924509..41924609 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:58106007..58106107 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch01_At.01N/A53.85SNPi31079GhView
2Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch01_At.01N/A52.1i31079GhView
Sequence
>TAMU_GH_TBb081G15f391 ID=TAMU_GH_TBb081G15f391; Name=TAMU_GH_TBb081G15f391; organism=Gossypium sp.; type=genetic_marker; length=105bp
TAGACAAGTTAGTTCGAAAGGGGTACGAGGCATACCTTGCCTGCGTATCT
[A/G]ATTCTGTTCCTGTAAGAGATATCTGCACTATGAGAGAGTTTCCGG
ATGTC