TAMU_GH_TBb006P24f645, TAMU_GH_TBb006P24f645 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb006P24f645
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i23634Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A01chromosomeA01:612797..612897 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018214.1chromosomeCM018214.1:83039675..83039774 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr05_CRI-A2_v1.0.a1chromosomeChr05_CRI-A2_v1.0.a1:89392314..89392414 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold4910supercontigscaffold4910:31050..31150 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A04chromosomeGhir_A04:7774256..7774356 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A04chromosomeA04:6919715..6919815 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A04chromosomeA04:6727284..6727384 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A04chromosomeA04:6307634..6307734 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A13chromosomeGbar_A13:84258236..84258335 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A13chromosomeA13:87381822..87381921 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017613.1chromosomeCM017613.1:7518268..7518368 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017639.1chromosomeCM017639.1:7947158..7947258 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017700.1chromosomeCM017700.1:85392913..85393012 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A04chromosomeA04:7364147..7364247 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr13chromosomeChr13:89983468..89983567 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr02chromosomeChr02:2682304..2682403 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr05chromosomeChr05:90168491..90168591 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
F05chromosomeF05:69728836..69728936 -Gossypium longicalyx (F1) genome NSF_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch04_At.04N/A47.26i23634GhView
2Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch04_At.04N/A28.2i23634GhView
Sequence
>TAMU_GH_TBb006P24f645 ID=TAMU_GH_TBb006P24f645; Name=TAMU_GH_TBb006P24f645; organism=Gossypium sp.; type=genetic_marker; length=105bp
GTGGAGGAGTAGGTGGCTGACGTGACAGTGGCGGTGGCAGCAGAGGCGGT
[A/G]GCCAGGTTCTGACATGGGGCGGCTAGGGTTAGGCTAGGCTAGGGT
TTTTT