NAU_TM29425, NAU_TM29425 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM29425
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM29425
TypeSNP
SNP AllelesC/T
5' Flanking SequenceATAGATCATCGAATACAAGTTATCGATTAGATTGCTTTTGGAGATCATATTATCCGGCAA
3' Flanking SequenceTTAATCGGTAATTAATTGTTCCCTTTGGTCTGGTTATAAGCATTATGGATATGTTTTATG
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018209.1chromosomeCM018209.1:105338105..105338225 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr08_CRI-A2_v1.0.a1chromosomeChr08_CRI-A2_v1.0.a1:114646793..114646913 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Dt_chr13chromosomeDt_chr13:9557464..9557584 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A08chromosomeA08:91299223..91299343 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A08chromosomeGhir_A08:109150688..109150808 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A08chromosomeA08:112142637..112142757 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A08chromosomeA08:111964246..111964366 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A08chromosomeA08:107947503..107947623 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A08chromosomeGbar_A08:105920539..105920659 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A08chromosomeA08:107170610..107170730 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017617.1chromosomeCM017617.1:105598866..105598986 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017643.1chromosomeCM017643.1:115088864..115088984 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017695.1chromosomeCM017695.1:106207173..106207293 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A08chromosomeA08:113820077..113820197 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr08chromosomeChr08:117637871..117637991 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr08chromosomeChr08:118558405..118558525 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch08_At.08N/A92.1TM29425View
Sequence
>NAU_TM29425 ID=NAU_TM29425; Name=NAU_TM29425; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
ATAGATCATCGAATACAAGTTATCGATTAGATTGCTTTTGGAGATCATAT
TATCCGGCAA[C/T]TTAATCGGTAATTAATTGTTCCCTTTGGTCTGGTT
ATAAGCATTATGGATATGTTTTATG