NAU_TM20946, NAU_TM20946 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM20946
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM20946
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGGAAAATTGGGAATGCTCCGGTAATTTTTCTGATGCTCTTGGTAAGCTCACTCATAAACT
3' Flanking SequenceAAAGAGTGGAATAAACAAGTTTATGGCAATATTACCACTCGCAAGGGGGGTCTTATCAAA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018208.1chromosomeCM018208.1:81930899..81931019 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr07_CRI-A2_v1.0.a1chromosomeChr07_CRI-A2_v1.0.a1:85921033..85921153 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Dt_chr1chromosomeDt_chr1:90695076..90695196 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A07chromosomeA07:68002335..68002455 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A07chromosomeGhir_A07:86166027..86166147 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A07chromosomeA07:85103670..85103790 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A07chromosomeA07:85878672..85878792 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A07chromosomeA07:81777858..81777978 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A07chromosomeGbar_A07:81779745..81779865 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A07chromosomeA07:83257527..83257647 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017616.1chromosomeCM017616.1:85139275..85139395 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017642.1chromosomeCM017642.1:87960203..87960323 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017694.1chromosomeCM017694.1:83336918..83337038 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A07chromosomeA07:87322517..87322637 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:88789966..88790086 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr07chromosomeChr07:90122762..90122882 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch07_At.07N/A103.4TM20946View
Sequence
>NAU_TM20946 ID=NAU_TM20946; Name=NAU_TM20946; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
GGAAAATTGGGAATGCTCCGGTAATTTTTCTGATGCTCTTGGTAAGCTCA
CTCATAAACT[C/T]AAAGAGTGGAATAAACAAGTTTATGGCAATATTAC
CACTCGCAAGGGGGGTCTTATCAAA