NAU_TM19848, NAU_TM19848 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM19848
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM19848
TypeSNP
SNP AllelesC/T
5' Flanking SequenceGGTGTGTGAGCCCTGTACTTAAGAAAAATTTTAAAATTTCATGAAAAATTTTCTGAACTT
3' Flanking SequenceTGATTAAGTCTCGATTTGTTTCTAAAACGTGATTTTGGCCTCAGGGCTCAATAAAGGGAC
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018208.1chromosomeCM018208.1:25916070..25916190 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr07_CRI-A2_v1.0.a1chromosomeChr07_CRI-A2_v1.0.a1:26058687..26058807 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Dt_chr1chromosomeDt_chr1:29022619..29022739 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A07chromosomeA07:25246731..25246851 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A07chromosomeGhir_A07:26422231..26422351 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A07chromosomeA07:25347230..25347350 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A07chromosomeA07:26481878..26481998 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A07chromosomeA07:26218487..26218607 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A07chromosomeGbar_A07:25951087..25951207 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A07chromosomeA07:25870617..25870737 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017616.1chromosomeCM017616.1:25875245..25875365 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017642.1chromosomeCM017642.1:26079027..26079147 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017694.1chromosomeCM017694.1:26312016..26312136 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A07chromosomeA07:26716915..26717035 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:27236790..27236910 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr07chromosomeChr07:27658208..27658328 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1LMY28 x XLZ24, RIL (2018)AD_ch07_At.07N/A60.88TM19848View
Sequence
>NAU_TM19848 ID=NAU_TM19848; Name=NAU_TM19848; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
GGTGTGTGAGCCCTGTACTTAAGAAAAATTTTAAAATTTCATGAAAAATT
TTCTGAACTT[C/T]TGATTAAGTCTCGATTTGTTTCTAAAACGTGATTT
TGGCCTCAGGGCTCAATAAAGGGAC