NAU_TM09730, NAU_TM09730 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM09730
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM09730
TypeSNP
SNP AllelesC/G
5' Flanking SequenceTTTTAACATGTAAAATCCAAGTGTCTATGTTGCAGATACACATATGTTTACAATTTGACC
3' Flanking SequenceACATGTTTACGTCAAATGTGAGCTTACGTGTAGCACTTAAGCTAATGGCTTCATTAATGG
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018205.1chromosomeCM018205.1:76823638..76823758 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
At_chr12chromosomeAt_chr12:52056612..52056732 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A04chromosomeA04:59251240..59251360 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A04chromosomeGhir_A04:80476663..80476783 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A04chromosomeA04:83313082..83313202 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A04chromosomeA04:80759222..80759342 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A04chromosomeA04:76392509..76392629 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A04chromosomeGbar_A04:77300551..77300671 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A04chromosomeA04:77737362..77737482 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017613.1chromosomeCM017613.1:79141915..79142035 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017639.1chromosomeCM017639.1:87669697..87669817 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017691.1chromosomeCM017691.1:77584819..77584939 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A04chromosomeA04:84438410..84438530 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
A04chromosomeA04:84417894..84418014 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr04chromosomeChr04:104423970..104424090 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1LMY28 x XLZ24, RIL (2018)AD_ch04_At.04N/A17.39TM9730View
Sequence
>NAU_TM09730 ID=NAU_TM09730; Name=NAU_TM09730; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
TTTTAACATGTAAAATCCAAGTGTCTATGTTGCAGATACACATATGTTTA
CAATTTGACC[C/G]ACATGTTTACGTCAAATGTGAGCTTACGTGTAGCA
CTTAAGCTAATGGCTTCATTAATGG