NAU_TM00024, NAU_TM00024 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00024
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00024
TypeSNP
SNP AllelesC/A
5' Flanking SequenceGAAGACGGGTGTGTTTATTTCACGATTGCCGATAAAGCTGTCGAAAACCATGGTGTGCTT
3' Flanking SequenceGGTTCCTACAGCACATGAGAGAAGAATTTAAAACCCTTGCTAGGAAAGGTTCGAGAAGTA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:761895..762015 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:829157..829277 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold944.1supercontigscaffold944.1:244114..244234 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:907874..907994 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:940368..940488 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:901200..901320 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:957721..957841 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:935888..936008 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:736405..736525 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:836474..836594 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:887862..887982 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:795074..795194 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:874591..874711 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:961563..961683 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:747869..747989 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:762040..762160 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Chr02chromosomeChr02:696439..696559 +Gossypium aridum (D4) genome ISU_v1n/a
Chr02chromosomeChr02:782704..782824 +Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>NAU_TM00024 ID=NAU_TM00024; Name=NAU_TM00024; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
GAAGACGGGTGTGTTTATTTCACGATTGCCGATAAAGCTGTCGAAAACCA
TGGTGTGCTT[A/C]GGTTCCTACAGCACATGAGAGAAGAATTTAAAACC
CTTGCTAGGAAAGGTTCGAGAAGTA