NAU_TM00017, NAU_TM00017 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00017
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00017
TypeSNP
SNP AllelesG/A
5' Flanking SequenceCAACAATGGGTCACTCTAACGTATGGAACTCTCACCCGAAAACCTACGGCCCTGGATCTC
3' Flanking SequenceCTCCTGGTAATTGTTTCCTTCCCTTTAATTCTTATTTAGTTTCGTGAAATTGCCTTTATT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:602445..602565 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:659951..660071 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold944.1supercontigscaffold944.1:416488..416608 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:716841..716961 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:767198..767318 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:732746..732866 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:784051..784171 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:762181..762301 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:576961..577081 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:668804..668924 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:702727..702847 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:633448..633568 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:702946..703066 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:788620..788740 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:605573..605693 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:592798..592918 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_01chromosomeB_01:674160..674280 +Gossypium anomalum (B1) genome NSF_v1n/a
F01chromosomeF01:621250..621370 +Gossypium longicalyx (F1) genome NSF_v1n/a
Sequence
>NAU_TM00017 ID=NAU_TM00017; Name=NAU_TM00017; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
CAACAATGGGTCACTCTAACGTATGGAACTCTCACCCGAAAACCTACGGC
CCTGGATCTC[A/G]CTCCTGGTAATTGTTTCCTTCCCTTTAATTCTTAT
TTAGTTTCGTGAAATTGCCTTTATT