NAU_TM00012, NAU_TM00012 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00012
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00012
TypeSNP
SNP AllelesC/T
5' Flanking SequenceTGCTAAAGTTATTCCCCTATTTGTAAAAATCAAAATCAAGTGAGTGTATGGTAAAATACG
3' Flanking SequenceACTTTGAAGAAAATGATCAAGCAAGTAATAAATAAAGAAAACTTCAAATCGAACTTACTT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:447350..447470 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:516237..516357 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold944.1supercontigscaffold944.1:572515..572635 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:567718..567838 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:612386..612506 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:582408..582528 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:629110..629230 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:607171..607291 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:421889..422009 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:513591..513711 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:547653..547773 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:489384..489504 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:547738..547858 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:633623..633743 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:449102..449222 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Sequence
>NAU_TM00012 ID=NAU_TM00012; Name=NAU_TM00012; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
TGCTAAAGTTATTCCCCTATTTGTAAAAATCAAAATCAAGTGAGTGTATG
GTAAAATACG[C/T]ACTTTGAAGAAAATGATCAAGCAAGTAATAAATAA
AGAAAACTTCAAATCGAACTTACTT