HAU0800, HAU0800 (genetic_marker) gossypium spp

Marker Overview
NameHAU0800
Genbank IDCO108117
TypeSSR
SpeciesGossypium spp.
Source SequenceCO108117
Source TypeEST
Repeat Motif(TACA)6
PCR ConditionAnnealing temperature: 57.4
Primer 1HAU0800_F: TGGTTATGCAGAGTTCAACG
Primer 2HAU0800_R: AACCCCAACAACCCTATTCT
Product Length194
Publication[view all]
CommentPrimer data obtained in 2012
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankCO108117
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
CO108117CO108117Gossypium spp.sequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
10-153 x sGK9708, RIL (2016)AD_ch02_At.02N/A35HAU800View
2Yumian-1 x 7235, RIL (2015)AD_ch17_Dt.03N/A0HAU0800View
3CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch02_At.02N/A167.1HAU0800View
4CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch17_Dt.03N/A138.8HAU0800View
5MGG-293-793, MAGIC (2018)AD_ch02_At.02N/A143HAU0800aView
Sequence
>HAU0800 ID=HAU0800; Name=HAU0800; organism=Gossypium spp.; type=genetic_marker; length=194bp
TGGTTATGCAGAGTTCAACGCCCGCTATGCTAATCAGTTCTTGCAGGACC
TACATACATACATGCATACATACATGAAGTTTTAAGCTTTGATTGTATGA
GCTAGGGGCCAAAATTTTGAAGCTAAAACCATGGGGGGTTTATGTTGCAG
GACTTATATGGATTAGGAGCAAGAAGAATAGGGTTGTTGGGGTT