HAU0780, HAU0780 (genetic_marker) gossypium spp

Marker Overview
NameHAU0780
Genbank IDCO093104
TypeSSR
SpeciesGossypium spp.
Source SequenceCO093104
Source TypeEST
Repeat Motif(GCT)5
PCR ConditionAnnealing temperature: 56.9
Primer 1HAU0780_F: CAGCCAATGTAAAAGCAGTG
Primer 2HAU0780_R: AGGCAATAAGAGCCGAGATA
Product Length299
Publication[view all]
CommentPrimer data obtained in 2012
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankCO093104
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
CO093104CO093104Gossypium spp.sequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch12_At.12N/A213.95HAU0780View
2CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch12_At.12N/A173.4HAU0780View
3TM-1 x Hai-7124, BC1 (2012)AD_ch12_At.12N/A151.7HAU0780-2000View
Sequence
>HAU0780 ID=HAU0780; Name=HAU0780; organism=Gossypium spp.; type=genetic_marker; length=299bp
CAGCCAATGTAAAAGCAGTGTTCACTTGCCTACTTGACCAAGTCAGCCAA
TATATTACTGATGGACTGGAACGGGCTAGAGATAGCTTGACTGAGGCTGC
AACCATGAGGGAAAGGTTTGTGCTAGGTACAAATCTTAGTAGAAGGGTGG
CTGCTGCAGCTGCTTCTGCGGCAGAAGCTGCAGCAGCTGCTGGTGAGAGC
AGTTTCAGATCTTTTATGGTTGCTGTACAGCGTTGTGGCAGTAGCGTGGC
CATAGTTCAGCAATACTTTGCAAATTCTATATCTCGGCTCTTATTGCCT