HAU0539, HAU0539 (genetic_marker) gossypium spp

Marker Overview
NameHAU0539
Genbank IDBQ409453
TypeSSR
SpeciesGossypium spp.
Source SequenceBQ409453
Source TypeEST
Repeat Motif(TGGCTG)6
PCR ConditionAnnealing temperature: 56.9
Primer 1HAU0539_F: CTCTTTGAGGCCAATTGTTT
Primer 2HAU0539_R: GAAGGGTGTAAATAGCAGAAAGA
Product Length224
Publication[view all]
CommentPrimer data obtained in 2012
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBQ409453
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BQ409453BQ409453Gossypium spp.sequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch13_At.13N/A87.93HAU0539View
2CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch13_At.13N/A66.8HAU0539View
3TM-1 x Hai-7124, BC1 (2012)AD_ch13_At.13N/A95.5HAU0539-250View
Sequence
>HAU0539 ID=HAU0539; Name=HAU0539; organism=Gossypium spp.; type=genetic_marker; length=224bp
CTCTTTGAGGCCAATTGTTTTCCTTTTCTTTTTTGGTTATTTCCCCTCTA
AATATTTTGTATTTTTGGGAATATATGAATTACCTTCAAAAAAATTGAAA
GGCACGAAATTTGGTAGTGTATCTTTTATGAGCCTAATGAAAATGTCAGT
ACTGGCTGTGGCTGTGGCTGTGGCTGTGGCTGTGGACTGACTATATTAGC
TTCTTTCTGCTATTTACACCCTTC