TAMU_GH_TBr166L16r128, TAMU_GH_TBr166L16r128 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBr166L16r128
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i48009Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysis
CM018202.1chromosomeCM018202.1:9724705..9724805 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:11107963..11108063 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1
At_chr2chromosomeAt_chr2:10068745..10068845 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1
A01chromosomeA01:9400025..9400125 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1
Ghir_A01chromosomeGhir_A01:9830974..9831074 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1
A01chromosomeA01:9378189..9378289 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1
A01chromosomeA01:9971499..9971599 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1
A01chromosomeA01:9799625..9799725 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1
Gbar_A01chromosomeGbar_A01:9809593..9809693 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1
A01chromosomeA01:9429055..9429155 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1
CM017610.1chromosomeCM017610.1:10803107..10803207 -Gossypium tomentosum (AD3) genome HGS_v1.1
CM017636.1chromosomeCM017636.1:10048460..10048560 -Gossypium mustelinum (AD4) genome JGI_v1.1
CM017688.1chromosomeCM017688.1:10002806..10002906 -Gossypium darwinii (AD5) genome HGS_v1.1
A01chromosomeA01:9983321..9983421 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1
Chr01chromosomeChr01:10003488..10003588 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1
Chr01chromosomeChr01:10948489..10948589 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch01_At.01N/A12.4i48009GhView
2HS-46 x MARCABUCAG8US-1-88, RIL (2018)AD_ch01_At.01N/A12.4i48009GhView
Sequence
>TAMU_GH_TBr166L16r128 ID=TAMU_GH_TBr166L16r128; Name=TAMU_GH_TBr166L16r128; organism=Gossypium sp.; type=genetic_marker; length=105bp
CTTCCTCTACTAGAGTCTTTTGATATGGCTGGTACATAATGACTAAAATG
[A/G]ATAAATTATGAAACTAAGGTAAAGTTTCAGTAATAATAGATAGTA
GGTCC