TAMU_GH_TBh101B23f244, TAMU_GH_TBh101B23f244 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh101B23f244
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i45356Gh
TypeSNP
SNP AllelesT/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018204.1chromosomeCM018204.1:8673829..8673929 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:103702826..103702926 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Dt_chr3chromosomeDt_chr3:20517193..20517293 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A03chromosomeA03:7232218..7232318 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A03chromosomeGhir_A03:9590570..9590670 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A03chromosomeA03:9091250..9091350 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A03chromosomeA03:9562469..9562569 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A03chromosomeA03:8980639..8980739 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A03chromosomeGbar_A03:8570973..8571073 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
CM017612.1chromosomeCM017612.1:9139914..9140014 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017638.1chromosomeCM017638.1:9534993..9535093 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017690.1chromosomeCM017690.1:8951351..8951451 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A03chromosomeA03:9687014..9687114 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr02chromosomeChr02:8641560..8641660 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:109368569..109368669 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch03_At.03N/A84.51SNPi45356GhView
2HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch02_At.02N/A41.41i45356GhView
3Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch03_At.03N/A67i45356GhView
Sequence
>TAMU_GH_TBh101B23f244 ID=TAMU_GH_TBh101B23f244; Name=TAMU_GH_TBh101B23f244; organism=Gossypium sp.; type=genetic_marker; length=105bp
GAAAACATATGTAAGTTACATAAAATTGGACAGTTATCTAATGATGTAAC
[G/T]GCTCCCACTAATGCATAACAAATACAATCTTTGAATTACATACAA
AAGTA