TAMU_GH_TBh067N15f552, TAMU_GH_TBh067N15f552 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh067N15f552
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i41891Gh
TypeSNP
SNP AllelesA/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018216.1chromosomeCM018216.1:21139158..21139258 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Dt_chr5chromosomeDt_chr5:62201552..62201652 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D02chromosomeD02:22542444..22542544 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D02chromosomeGhir_D02:22039925..22040025 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D02chromosomeD02:22049950..22050050 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D02chromosomeD02:21946423..21946523 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D02chromosomeD02:21969814..21969914 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D02chromosomeGbar_D02:21558842..21558942 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D02chromosomeD02:21612703..21612803 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017624.1chromosomeCM017624.1:21738210..21738310 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017650.1chromosomeCM017650.1:22796526..22796626 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017702.1chromosomeCM017702.1:21344015..21344115 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D02chromosomeD02:22412566..22412666 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:21705719..21705819 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr05chromosomeChr05:14945033..14945133 +Gossypium aridum (D4) genome ISU_v1n/a
Chr05_6339778chromosomeChr05_6339778:2303..2403 +Gossypium lobatum (D7) genome ISU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch14_Dt.02N/A40.31i41891GhView
20-153 x sGK9708, RIL (2017)AD_ch14_Dt.02N/A51.78i41891GhView
3HS-46 x MARCABUCAG8US-1-88, RIL (2018)AD_ch14_Dt.02N/A40.31i41891GhView
4Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch14_Dt.02N/A58.2i41891GhView
Sequence
>TAMU_GH_TBh067N15f552 ID=TAMU_GH_TBh067N15f552; Name=TAMU_GH_TBh067N15f552; organism=Gossypium sp.; type=genetic_marker; length=105bp
GAAAAGAATAGGAGAAGTAATCATTTTTATCCTAATATATAAAAATCAAT
[A/C]TTGTCAAATTGGAATGATGAGAGAAGAAAATGAGAGATATGTGTT
TGTCA