TAMU_GH_TBh026J07r569, TAMU_GH_TBh026J07r569 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh026J07r569
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i37629Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018214.1chromosomeCM018214.1:57610434..57610534 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr13_CRI-A2_v1.0.a1chromosomeChr13_CRI-A2_v1.0.a1:65744028..65744128 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr13chromosomeAt_chr13:11418635..11418735 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
scaffold3586_A13supercontigscaffold3586_A13:1269950..1270050 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A13chromosomeGhir_A13:56424751..56424851 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A13chromosomeA13:58901829..58901929 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A13chromosomeA13:57084171..57084271 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A13chromosomeA13:55726667..55726767 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A13chromosomeGbar_A13:58390472..58390572 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A13chromosomeA13:61610130..61610230 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017622.1chromosomeCM017622.1:58631943..58632043 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017648.1chromosomeCM017648.1:62489859..62489959 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017700.1chromosomeCM017700.1:60011747..60011847 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A13chromosomeA13:58910737..58910837 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr13chromosomeChr13:55626251..55626351 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch13_At.13N/A39.28i37629GhView
2HS-46 x MARCABUCAG8US-1-88, RIL (2018)AD_ch13_At.13N/A39.28i37629GhView
3DS-28 x SBYF-425, RIL (2022)AD_ch14_Dt.02N/A58.12i37629GhView
4Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch13_At.13N/A47i37629GhView
Sequence
>TAMU_GH_TBh026J07r569 ID=TAMU_GH_TBh026J07r569; Name=TAMU_GH_TBh026J07r569; organism=Gossypium sp.; type=genetic_marker; length=105bp
GAAACGGTAGGTATACTACTTTTAGTCGAGGGAAGAATAGTGATATGAAC
[A/G]AATGATCTGAAGCAAGAACACCAACTAGAGCCAATCAGAGCTCAT
GTGGA