TAMU_GH_TBh021L18r238, TAMU_GH_TBh021L18r238 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh021L18r238
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i37093Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysis
CM018202.1chromosomeCM018202.1:110670960..110671060 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1
Chr02_CRI-A2_v1.0.a1chromosomeChr02_CRI-A2_v1.0.a1:96995601..96995701 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1
Dt_chr9chromosomeDt_chr9:51510337..51510437 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1
A01chromosomeA01:97457787..97457887 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1
Ghir_A01chromosomeGhir_A01:115137527..115137627 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1
A01chromosomeA01:115636492..115636592 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1
A01chromosomeA01:113435901..113436001 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1
A01chromosomeA01:110225929..110226029 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1
Gbar_A01chromosomeGbar_A01:113157446..113157546 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1
A01chromosomeA01:113132751..113132851 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1
CM017610.1chromosomeCM017610.1:111651399..111651499 +Gossypium tomentosum (AD3) genome HGS_v1.1
CM017636.1chromosomeCM017636.1:119170042..119170142 +Gossypium mustelinum (AD4) genome JGI_v1.1
CM017688.1chromosomeCM017688.1:109305067..109305167 +Gossypium darwinii (AD5) genome HGS_v1.1
A01chromosomeA01:117092440..117092540 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1
Chr01chromosomeChr01:120435708..120435808 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1
Chr02chromosomeChr02:2420753..2420853 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch01_At.01N/A18.41SNPi37093GhView
20-153 x sGK9708, RIL (2017)AD_ch01_At.01N/A28.75i37093GhView
33-79 x TM-1, F2 (2015 SNP)AD_ch01_At.01N/A20.12i37093GhView
4Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch01_At.01N/A15.4i37093GhView
Sequence
>TAMU_GH_TBh021L18r238 ID=TAMU_GH_TBh021L18r238; Name=TAMU_GH_TBh021L18r238; organism=Gossypium sp.; type=genetic_marker; length=105bp
AAGAGTTGAATAGAAATGGTTCTCAACCCCTTCGGGTTCGATTTTGACAA
[C/T]GGAGGAGGACCCTCCGGCACTGCAACCGTGGGAAACCAGTGAGTC
TCTTC