TAMU_GH_TBh018L06f608, TAMU_GH_TBh018L06f608 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh018L06f608
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i36740Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018216.1chromosomeCM018216.1:54300311..54300411 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Dt_chr5chromosomeDt_chr5:24265251..24265351 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D02chromosomeD02:54979711..54979811 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D02chromosomeGhir_D02:56781097..56781197 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D02chromosomeD02:57311117..57311217 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D02chromosomeD02:58222272..58222372 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D02chromosomeD02:55220570..55220670 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D02chromosomeGbar_D02:54845467..54845567 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D02chromosomeD02:56158611..56158711 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017624.1chromosomeCM017624.1:57141393..57141493 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017650.1chromosomeCM017650.1:58560946..58561046 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017702.1chromosomeCM017702.1:55748460..55748560 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D02chromosomeD02:59168358..59168458 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:53070595..53070695 -Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr05chromosomeChr05:36388304..36388404 -Gossypium lobatum (D7) genome ISU_v1n/a
Chr05chromosomeChr05:36387749..36387849 -Gossypium lobatum (D7) genome ISU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch14_Dt.02N/A52i36740GhView
2HS-46 x MARCABUCAG8US-1-88, RIL (2018)AD_ch14_Dt.02N/A52i36740GhView
Sequence
>TAMU_GH_TBh018L06f608 ID=TAMU_GH_TBh018L06f608; Name=TAMU_GH_TBh018L06f608; organism=Gossypium sp.; type=genetic_marker; length=105bp
ATGACACTCTATACTAATCTGAAGGTCTATACTAAGTTCACCAAAGAGTC
[C/T]CTTTAACCAAATAGCTTCTTTATAAGCCTCAATAATCATCATGTT
TTGAG