TAMU_GH_TBb117N15f376, TAMU_GH_TBb117N15f376 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb117N15f376
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i34791Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018205.1chromosomeCM018205.1:50628461..50628561 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr04_CRI-A2_v1.0.a1chromosomeChr04_CRI-A2_v1.0.a1:33759435..33759535 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Dt_chr5chromosomeDt_chr5:5405278..5405378 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A04chromosomeA04:32417621..32417721 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A04chromosomeGhir_A04:53358688..53358788 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A04chromosomeA04:55957332..55957432 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A04chromosomeA04:53623643..53623743 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A04chromosomeA04:49507205..49507305 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A04chromosomeGbar_A04:50806565..50806665 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A04chromosomeA04:51610990..51611090 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017613.1chromosomeCM017613.1:53317790..53317890 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017639.1chromosomeCM017639.1:59102563..59102663 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017691.1chromosomeCM017691.1:51129346..51129446 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A04chromosomeA04:56501617..56501717 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr04chromosomeChr04:88919691..88919791 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr04chromosomeChr04:77029164..77029264 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch04_At.04N/A62.12i34791GhView
2DS-28 x SBYF-425, RIL (2022)AD_ch04_At.04N/A92.53i34791GhView
3Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch04_At.04N/A39.1i34791GhView
Sequence
>TAMU_GH_TBb117N15f376 ID=TAMU_GH_TBb117N15f376; Name=TAMU_GH_TBb117N15f376; organism=Gossypium sp.; type=genetic_marker; length=105bp
AAAAATGAAATATTTGTCTAATTAGGAGTATAGGTGGTAACAACCCTAGT
[C/T]AATATTAACTAGGGTTAGTTGTCCAGCCTATTAACGTGAGGGACT
TTTGG