TAMU_GH_TBb102A24f592, TAMU_GH_TBb102A24f592 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb102A24f592
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i33174Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A07chromosomeA07:92643982..92644082 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018208.1chromosomeCM018208.1:92660072..92660172 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
scaffold104.1supercontigscaffold104.1:166874..166974 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A07chromosomeA07:77116731..77116831 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A07chromosomeGhir_A07:96565916..96566016 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A07chromosomeA07:95492853..95492953 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A07chromosomeA07:95575220..95575320 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A07chromosomeA07:92106013..92106113 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A07chromosomeGbar_A07:91602300..91602400 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A07chromosomeA07:93926619..93926719 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017616.1chromosomeCM017616.1:95611276..95611376 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017642.1chromosomeCM017642.1:98490791..98490891 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017694.1chromosomeCM017694.1:93956035..93956135 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A07chromosomeA07:97764933..97765033 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:99516582..99516679 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch07_At.07N/A24.46i33174GhView
2HS-46 x MARCABUCAG8US-1-88, RIL (2018)AD_ch07_At.07N/A24.46i33174GhView
33-79 x TM-1, F2 (2015 SNP)AD_ch07_At.07N/A4.7i33174GhView
Sequence
>TAMU_GH_TBb102A24f592 ID=TAMU_GH_TBb102A24f592; Name=TAMU_GH_TBb102A24f592; organism=Gossypium sp.; type=genetic_marker; length=105bp
ACCCATCATCAGAAAGTCAATCGGAGGAAGAAAGCTTTTCAAAAGTTTTA
[C/T]AAACCCAACCAAATGTGGAACAATCAGATGATGAAGATATGCCAG
AAGTA