TAMU_GH_TBb097G10r426, TAMU_GH_TBb097G10r426 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb097G10r426
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i32655Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A10chromosomeA10:64740791..64740891 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018211.1chromosomeCM018211.1:64900688..64900788 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr10_CRI-A2_v1.0.a1chromosomeChr10_CRI-A2_v1.0.a1:82970434..82970534 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr11chromosomeAt_chr11:34504409..34504509 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A10chromosomeA10:57183778..57183878 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A10chromosomeGhir_A10:68713783..68713883 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A10chromosomeA10:70295366..70295466 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A10chromosomeA10:68475284..68475384 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A10chromosomeA10:64127147..64127247 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A10chromosomeGbar_A10:65266946..65267046 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A10chromosomeA10:66808946..66809046 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017619.1chromosomeCM017619.1:65916429..65916529 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017645.1chromosomeCM017645.1:71365562..71365662 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017697.1chromosomeCM017697.1:67769877..67769977 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A10chromosomeA10:71538296..71538396 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:34119604..34119704 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr10chromosomeChr10:45160152..45160252 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch10_At.10N/A38.15i32655GhView
2HS-46 x MARCABUCAG8US-1-88, RIL (2018)AD_ch10_At.10N/A38.15i32655GhView
Sequence
>TAMU_GH_TBb097G10r426 ID=TAMU_GH_TBb097G10r426; Name=TAMU_GH_TBb097G10r426; organism=Gossypium sp.; type=genetic_marker; length=105bp
ATTCTTCCAGCTTTTGTTTTATTTTCTTTTCTCCTTCATCCTCTTCTTTG
[A/G]TGACTCCGAAGAAGAGATAATTACTAGAAGCTCTTAATGGACGGA
TGATT